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KJC3_004834-T1, KJC3_004834-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004834-T1
Unique NameKJC3_004834-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:834666..836489+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004834-T1 ID=KJC3_004834-T1|Name=KJC3_004834-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1824bp|location=Sequence derived from alignment at ch4:834666..836489+ (Aspergillus niger KJC3)
GTCTGCCAGTGTTCAGAGATCTCCAGATTCCAAGTACCTATTGGAAAGAC
AGATATTATGTCTATGTCAAAGTTTCTTTCAAAAACGGCCGCCCGCGCCG
CGTCCACGTCGACTTCGGCGTCGTCGATGACCAAGGCTGCGGGCGATATC
TCCAGCGTCTTCCCCAGTTTGAGACCAGACTACAAGCCAGAGCCACTGCC
CCCGCGGTTCAGGGATCTGAAGCTGAAATACTTTGAAAAGAATGAAAAGG
CTCTGAAGCAAAGCTGGGAGCGACTCCTCCCTAGCTTGGAGGAGGAAGTG
CACAAGATCAAGGCCAAAGGAAGCGATGTAAATTTCCATGGCATCTTCTA
TATGCATTGAGTGACACTAACAAAATGCCCAGATCATTCCATCGGTGCAA
TATTCCGACGTGGTCAATGGAACCGTCCCAGACCATCTCCTTGCAGAGAT
CCGTCACAGAGGTTCCGTGGTCATCAGGAACGTGATGCCTCGAGAGAAAG
CCCTCGACTGGAAGGAGAGGATCAAGGACTATGCTGCTGCCAATCAAGAG
CGCGTGAAGGCCTTTCCTCCCGACTCCCCAGCGGTCTATGAGCTGTACTG
GACTCCATCTCAAGCAGAGGCCCGAGCACATCCGAACATGCTCGGAACCC
AGCGCTTCCTGCAGCGTCTCTGGCACTCGTCCGATCCCAACACCCCCATC
TCGACCCGGAACCCCTTGACCTACGCAGACCGACTCCGTATCAGGCAGCC
GGGTGACGCAAAGTTCACTCTTGGCCCTCACATCGACGGTGGATCATTGG
AGCGCTGGGAGGATCCTGAATACTCCCGGGTCTATACCAAGATTCTAGAG
GGCAAATGGGAAGAGTACGACCCATGGGACGCCAAGCACCGTGTCTCGGC
CAATATGGACTTATACAATGGCGCCGGTTCCTGCTCCATGCTGAGATTCT
TCCAAGGATGGCTGTCCATGTCCAACACAGCTCCTGGCGAAGGCTCACTG
CATGTGTGCCCCATGCTCATCCAGAGTACCGCCTACACTATCCTCCGACC
TTTCTTCGACCCAGTGTCCTCGCAGCCGGTGCTGGACAACACATTCCCCG
GTGCCGTACCCGGAACGTGTCAAGAGTACAACCCCGTAACACATCCTCAC
CTGGATCTCGAAACTACCATGGTGTCCGTCCCCGAGGTAGAACCGGGTGA
CTACGTTGCCTGGCACTGTGATTCCTTGCACTCCGTTGACAAGGAACATC
GCGGCAAGGGAGACTCCAGCGTTCTCTACATCCCTGCCACGCCTATGTGC
GAAATGAACGTGGACTACCTGCTCAAGCAGCGCCAGGCTGCGCTTGCTTA
CTCTCCGCCCTGGGATTTCCCGGGCGCTGGTGGACCCGGTGAGATCGGTT
TCCAGGGAGCACTTGACTGGAGCTCTGTTGATGCAGAAGGCCTGCGCGCC
ATGGGTATGGGAAGTCAGCCATGGGAGATTACCGACGACATGAGCGAGGG
AGAGAAGGCGGTTGTCAGAGCTGCCAACAAGACCTGCTTCGGGCAAGCAT
GAGTCTCTTGCATAAGATGAGCACACTTGGAGTCACAAACTTGTATTTGT
ATTTGTACATAGAATAGCATCAAACTGTATATCATTCAGACTATATCACC
GTCTTGGCAGCTGTATGAAAGACCTTCCTGTAAAACATGATTAATATGAG
GTAGAGGACATGTGTCGCACTCTAAATGTTTGACATTATGTCCACGCCGA
TGTCAGTCCTATGGGAGAGCACCCATCAGTAAATACTGTAACAGCTGTTC
TTGATGATGGAGAATTGGGAGAAG
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Coding sequence (CDS) from alignment at ch4:834666..836489+

>KJC3_004834-T1 ID=KJC3_004834-T1|Name=KJC3_004834-T1|organism=Aspergillus niger KJC3|type=CDS|length=2880bp|location=Sequence derived from alignment at ch4:834666..836489+ (Aspergillus niger KJC3)
ATGTCTATGTCAAAGTTTCTTTCAAAAACGGCCGCCCGCGCCGCGTCCAC
GTCGACTTCGGCGTCGTCGATGACCAAGGCTGCGGGCGATATCTCCAGCG
TCTTCCCCAGTTTGAGACCAGACTACAAGCCAGAGCCACTGCCCCCGCGG
TTCAGGGATCTGAAGCTGAAATACTTTGAAAAGAATGAAAAGGCTCTGAA
GCAAAGCTGGGAGCGACTCCTCCCTAGCTTGGAGGAGGAAGTGCACAAGA
TCAAGGCCAAAGGAAGCGATATCATTCCATCGGTGCAATATTCCGACGTG
GTCAATGGAACCGTCCCAGACCATCTCCTTGCAGAGATCCGTCACAGAGG
TTCCGTGGTCATCAGGAACGTGATGCCTCGAGAGAAAGCCCTCGACTGGA
AGGAGAGGATCAAGGACTATGCTGCTGCCAATCAAGAGCGCGTGAAGGCC
TTTCCTCCCGACTCCCCAGCGGTCTATGAGCTGTACTGGACTCCATCTCA
AGCAGAGGCCCGAGCACATCCGAACATGCTCGGAACCCAGCGCTTCCTGC
AGCGTCTCTGGCACTCGTCCGATCCCAACACCCCCATCTCGACCCGGAAC
CCCTTGACCTACGCAGACCGACTCCGTATCAGGCAGCCGGGTGACGCAAA
GTTCACTCTTGGCCCTCACATCGACGGTGGATCATTGGAGCGCTGGGAGG
ATCCTGAATACTCCCGGGTCTATACCAAGATTCTAGAGGGCAAATGGGAA
GAGTACGACCCATGGGACGCCAAGCACCGTGTCTCGGCCAATATGGACTT
ATACAATGGCGCCGGTTCCTGCTCCATGCTGAGATTCTTCCAAGGATGGC
TGTCCATGTCCAACACAGCTCCTGGCGAAGGCTCACTGCATGTGTGCCCC
ATGCTCATCCAGAGTACCGCCTACACTATCCTCCGACCTTTCTTCGACCC
AGTGTCCTCGCAGCCGGTGCTGGACAACACATTCCCCGGTGCCGTACCCG
GAACGTGTCAAGAGTACAACCCCGTAACACATCCTCACCTGGATCTCGAA
ACTACCATGGTGTCCGTCCCCGAGGTAGAACCGGGTGACTACGTTGCCTG
GCACTGTGATTCCTTGCACTCCGTTGACAAGGAACATCGCGGCAAGGGAG
ACTCCAGCGTTCTCTACATCCCTGCCACGCCTATGTGCGAAATGAACGTG
GACTACCTGCTCAAGCAGCGCCAGGCTGCGCTTGCTTACTCTCCGCCCTG
GGATTTCCCGGGCGCTGGTGGACCCGGTGAGATCGGTTTCCAGGGAGCAC
TTGACTGGAGCTCTGTTGATGCAGAAGGCCTGCGCGCCATGGGTATGGGA
AGTCAGCCATGGGAGATTACCGACGACATGAGCGAGGGAGAGAAGGCGGT
TGTCAGAGCTGCCAACAAGACCTGCTTCGGGCAAGCATGAATGTCTATGT
CAAAGTTTCTTTCAAAAACGGCCGCCCGCGCCGCGTCCACGTCGACTTCG
GCGTCGTCGATGACCAAGGCTGCGGGCGATATCTCCAGCGTCTTCCCCAG
TTTGAGACCAGACTACAAGCCAGAGCCACTGCCCCCGCGGTTCAGGGATC
TGAAGCTGAAATACTTTGAAAAGAATGAAAAGGCTCTGAAGCAAAGCTGG
GAGCGACTCCTCCCTAGCTTGGAGGAGGAAGTGCACAAGATCAAGGCCAA
AGGAAGCGATATCATTCCATCGGTGCAATATTCCGACGTGGTCAATGGAA
CCGTCCCAGACCATCTCCTTGCAGAGATCCGTCACAGAGGTTCCGTGGTC
ATCAGGAACGTGATGCCTCGAGAGAAAGCCCTCGACTGGAAGGAGAGGAT
CAAGGACTATGCTGCTGCCAATCAAGAGCGCGTGAAGGCCTTTCCTCCCG
ACTCCCCAGCGGTCTATGAGCTGTACTGGACTCCATCTCAAGCAGAGGCC
CGAGCACATCCGAACATGCTCGGAACCCAGCGCTTCCTGCAGCGTCTCTG
GCACTCGTCCGATCCCAACACCCCCATCTCGACCCGGAACCCCTTGACCT
ACGCAGACCGACTCCGTATCAGGCAGCCGGGTGACGCAAAGTTCACTCTT
GGCCCTCACATCGACGGTGGATCATTGGAGCGCTGGGAGGATCCTGAATA
CTCCCGGGTCTATACCAAGATTCTAGAGGGCAAATGGGAAGAGTACGACC
CATGGGACGCCAAGCACCGTGTCTCGGCCAATATGGACTTATACAATGGC
GCCGGTTCCTGCTCCATGCTGAGATTCTTCCAAGGATGGCTGTCCATGTC
CAACACAGCTCCTGGCGAAGGCTCACTGCATGTGTGCCCCATGCTCATCC
AGAGTACCGCCTACACTATCCTCCGACCTTTCTTCGACCCAGTGTCCTCG
CAGCCGGTGCTGGACAACACATTCCCCGGTGCCGTACCCGGAACGTGTCA
AGAGTACAACCCCGTAACACATCCTCACCTGGATCTCGAAACTACCATGG
TGTCCGTCCCCGAGGTAGAACCGGGTGACTACGTTGCCTGGCACTGTGAT
TCCTTGCACTCCGTTGACAAGGAACATCGCGGCAAGGGAGACTCCAGCGT
TCTCTACATCCCTGCCACGCCTATGTGCGAAATGAACGTGGACTACCTGC
TCAAGCAGCGCCAGGCTGCGCTTGCTTACTCTCCGCCCTGGGATTTCCCG
GGCGCTGGTGGACCCGGTGAGATCGGTTTCCAGGGAGCACTTGACTGGAG
CTCTGTTGATGCAGAAGGCCTGCGCGCCATGGGTATGGGAAGTCAGCCAT
GGGAGATTACCGACGACATGAGCGAGGGAGAGAAGGCGGTTGTCAGAGCT
GCCAACAAGACCTGCTTCGGGCAAGCATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004834KJC3_004834Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004834-T1.utr5p1KJC3_004834-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004834-T1.exon1KJC3_004834-T1.exon1Aspergillus niger KJC3exon
KJC3_004834-T1.exon2KJC3_004834-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004834-T1.cdsKJC3_004834-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004834-T1.utr3p1KJC3_004834-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004834-T1KJC3_004834-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010856
DBxrefInterPro:IPR027443
DBxrefPFAM:PF07350
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:834666..836489 +
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