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KJC3_004838-T1, KJC3_004838-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004838-T1
Unique NameKJC3_004838-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:846513..847470-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004838-T1 ID=KJC3_004838-T1|Name=KJC3_004838-T1|organism=Aspergillus niger KJC3|type=mRNA|length=958bp|location=Sequence derived from alignment at ch4:846513..847470- (Aspergillus niger KJC3)
ATGGTCAAGGCTGGTAGGTACCTGCACTTTTCTTCAGCCCTTTTGGTTTT
TCTATTCTGCTATTGGCCTTAACCCCCTCCACGGATCCACGATCGACCGT
GGCCGGGGGACCTTGAGTGAGCAGATTTGAGCACCTTGCGATCCCTCCTG
CACCTATCACGGTCTGGGGACCCTGTTTGCCAGCCGGACAAGCTCAGGGG
GATTCGGTGACATCTGCCAGCTCATTCGTCCCCCGTCAGCTGGAGCTTTG
TTTTATCTTTCGTATTAATAGTACCACGATTCAAGTCTGGTTGATGGCCG
GTGATCGTTGGATCTCGTGGTTCTGGAAGGTTTCCATCAATGCAAATCAT
GGGCTGACATCCATCTCTTAGTCGCTGTTATCCGTGGAGACTCTAAGGTC
TCCGGCACTGTCACTTTCGAGCAGGCCAACGAGAACACCCCCACCACCAT
CTCCTGGAACATCACTGGCCACGACGCCAACGCTGAGCGTGGCTTCCACG
TCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC
TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCA
CGTCGGTGACCTTGGCAACTTCAAGACCGATGCCGAGGGTAACGCCGTTG
GTTCCAAGCAGGACAAGCTGGTGAAGCTCATCGGTGCTGAGAGCGTCCTG
GGCGTACGTTTTATCCCTCCCCTTCTTGCTCATAGTCTTTGTAAAGATGC
TAATGCAATGGATACAGCGGACCCTGGTCGTCCACGCTGGTACTGATGAC
CTTGGCCGTGGTGGCAACGAGGAGTCCAAGAAGACCGGTAACGCTGGTCC
TCGTCCCGCTTGCGGTAAGCTTATCCCTACCACGATACCCCATCTACTTT
ACTTGAACATTGTTTGCTGATTTCGTCTGTCACAGGTGTCATTGGCATTG
CTGCTTAA
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Coding sequence (CDS) from alignment at ch4:846513..847470-

>KJC3_004838-T1 ID=KJC3_004838-T1|Name=KJC3_004838-T1|organism=Aspergillus niger KJC3|type=CDS|length=1860bp|location=Sequence derived from alignment at ch4:846513..847470- (Aspergillus niger KJC3)
GTGTCATTGGCATTGCTGCTTAACGGACCCTGGTCGTCCACGCTGGTACT
GATGACCTTGGCCGTGGTGGCAACGAGGAGTCCAAGAAGACCGGTAACGC
TGGTCCTCGTCCCGCTTGCGTCGCTGTTATCCGTGGAGACTCTAAGGTCT
CCGGCACTGTCACTTTCGAGCAGGCCAACGAGAACACCCCCACCACCATC
TCCTGGAACATCACTGGCCACGACGCCAACGCTGAGCGTGGCTTCCACGT
CCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCACT
TCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCAC
GTCGGTGACCTTGGCAACTTCAAGACCGATGCCGAGGGTAACGCCGTTGG
TTCCAAGCAGGACAAGCTGGTGAAGCTCATCGGTGCTGAGAGCGTCCTGG
GCATGGTCAAGGCTGGTGTCATTGGCATTGCTGCTTAACGGACCCTGGTC
GTCCACGCTGGTACTGATGACCTTGGCCGTGGTGGCAACGAGGAGTCCAA
GAAGACCGGTAACGCTGGTCCTCGTCCCGCTTGCGTCGCTGTTATCCGTG
GAGACTCTAAGGTCTCCGGCACTGTCACTTTCGAGCAGGCCAACGAGAAC
ACCCCCACCACCATCTCCTGGAACATCACTGGCCACGACGCCAACGCTGA
GCGTGGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCT
CCGCTGGCCCTCACTTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAG
GACGACGAGCGTCACGTCGGTGACCTTGGCAACTTCAAGACCGATGCCGA
GGGTAACGCCGTTGGTTCCAAGCAGGACAAGCTGGTGAAGCTCATCGGTG
CTGAGAGCGTCCTGGGCATGGTCAAGGCTGGTGTCATTGGCATTGCTGCT
TAACGGACCCTGGTCGTCCACGCTGGTACTGATGACCTTGGCCGTGGTGG
CAACGAGGAGTCCAAGAAGACCGGTAACGCTGGTCCTCGTCCCGCTTGCG
TCGCTGTTATCCGTGGAGACTCTAAGGTCTCCGGCACTGTCACTTTCGAG
CAGGCCAACGAGAACACCCCCACCACCATCTCCTGGAACATCACTGGCCA
CGACGCCAACGCTGAGCGTGGCTTCCACGTCCACCAGTTCGGTGACAACA
CCAACGGCTGCACCTCCGCTGGCCCTCACTTCAACCCCTTCGGCAAGACC
CACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGACCTTGGCAACTT
CAAGACCGATGCCGAGGGTAACGCCGTTGGTTCCAAGCAGGACAAGCTGG
TGAAGCTCATCGGTGCTGAGAGCGTCCTGGGCATGGTCAAGGCTGGTGTC
ATTGGCATTGCTGCTTAACGGACCCTGGTCGTCCACGCTGGTACTGATGA
CCTTGGCCGTGGTGGCAACGAGGAGTCCAAGAAGACCGGTAACGCTGGTC
CTCGTCCCGCTTGCGTCGCTGTTATCCGTGGAGACTCTAAGGTCTCCGGC
ACTGTCACTTTCGAGCAGGCCAACGAGAACACCCCCACCACCATCTCCTG
GAACATCACTGGCCACGACGCCAACGCTGAGCGTGGCTTCCACGTCCACC
AGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCACTTCAAC
CCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGG
TGACCTTGGCAACTTCAAGACCGATGCCGAGGGTAACGCCGTTGGTTCCA
AGCAGGACAAGCTGGTGAAGCTCATCGGTGCTGAGAGCGTCCTGGGCATG
GTCAAGGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006801superoxide metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004784superoxide dismutase activity
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004838KJC3_004838Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004838-T1KJC3_004838-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004838-T1.cdsKJC3_004838-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004838-T1.exon4KJC3_004838-T1.exon4Aspergillus niger KJC3exon
KJC3_004838-T1.exon3KJC3_004838-T1.exon3Aspergillus niger KJC3exon
KJC3_004838-T1.exon2KJC3_004838-T1.exon2Aspergillus niger KJC3exon
KJC3_004838-T1.exon1KJC3_004838-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR018152
DBxrefInterPro:IPR036423
DBxrefInterPro:IPR001424
DBxrefPFAM:PF00080
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:846513..847470 -
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