|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:904063..908246+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004853-T1 ID=KJC3_004853-T1|Name=KJC3_004853-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4184bp|location=Sequence derived from alignment at ch4:904063..908246+ (Aspergillus niger KJC3)
GTGACCGAACCGGGGAAGGCCATAGCGGGCAGCAAAGGATCAACTTACCC
CAGAATCCAGCGATAGCTACATGTCGTTCTTTGTATTGTTCGGCGGACTT
CCCTGTTCAGTGAAGGCATCCTTACGTGCGCGCGCTTATTATTAGTGCAA
TAAGGTGTGCGAAAATAAGCTATGTACCCTCAGTCTGCGGGGTTGCTTTG
CGTTCATTGAAATTGTTGCGCCTTGCCTGTGAAAGGACCCCGATCTTCAC
CACGCGGTCACTGGGGAGTCGACACACGCATCTCTATTCCCTGCATCATC
CACTCACATATCCAATTGGCGAGAAGCCTAGTCTTCTTACTGAACCATGG
CTTCGATTGAAGATGACGACGATCGCGACCTTGCAGGTAAGCTTCGTGAC
TTCCTCCGGTTCATCTGGGCAACACTGATAAGTTTTCCCATTTTTTAGGC
TCTCAAGACGGAAGCTCGGACAATGAAATGGAGGATACACTTCGGGATGC
AGACGATGGGGGTAACGACAACGAACCTGATCCCGACGCGGACGCCGACC
AAGATGCGGAAAGCCAGTCCAATGCCAGTCATGCATCGGAAAGCGCTGGG
GTAGCGACGCAACCGAACCCTGATGTCGAAATGTCTAATACAACTGCTGC
GAATTCCTTTTCTGATCCGAGAGCTGCTTTCCATCCGAGCGTGCGGGAGA
AATGCCTGACGGCGCCTACGTTCGATATAGTCCCAACTACGGCCGCCCCT
CACAGTACTTCGATCAATGCGGTAACTGCGACCGCTGACATGAGATGGGT
TTTCAGCGGCGGCTCCGATGGATACGTTCGGAAGTTCAATTGGGTGGATT
CTGTCAACAGCAAGCTGATGCTCACTGTGGCGCAAAGACACCCTTTCGTC
GACAGTGTCATCAAGGCGGGTGTGCTAATGACATACTGGGAAAATATGGA
TGGGAACACAATATCGCCAGTATACTCTTTGGCTAGCCACAGTGAGGGTC
TATGGTTGTTGTCCGGCTTGGAATCCGGTAGCATCCGTCTGCAATCAGTC
CGTCACGATGAAGGAAAAGAGATCGCTCTTCTGCAGCAGCATACATCCGC
AGTCTCTGTACTGAGCTTGACTTCAGATGAAAAGTCCCTACTGTCCGGCA
GCTGGGACAAGCGAGTTTTTGACTGGGACCTTAACACAGGGCAGACGCGA
CGCGCATTTGGGTCTAGTGCCGGGCAAATATCTGCGGTCGAGATACGACC
AGAATCCAGTCTGCCAGTTCCCAGGGATACAACCGAGATCCAGCAAACAA
ATGGAACATACTCGTCCAATTACCAGGCTCCTGAGAATGGCAGCTTTAAC
TTCATGGATACGTCGAACGACGGTGAAAACGGCGCTGGTTCAAACCCGCA
GGCGGGCTCTCCGGCCGATTCACTCTTCGGCGGGGCCGACTCGCTATTCG
GCGACGAGAACGGGAATGGAGGCGACGAGGCCGGCGCATCTGGAAATGCT
TTCGGCATTGATGAGGATGATGAGTTTGGTAAAGCTCTAACTAATGGAGT
GTTGCCAGATGCCGATGCCCCTGGAGAACCGGAACCGAGTCAGAACGGCG
TTGCAGAGGCTCCTGCTGCTCCGGCTCCGGCTCCGGCTGCGGCTGGTACT
GAAGCCGCAACTGTTAATGATATTGCCGCCACTCACCCCCCGGCGGAGAT
GCCTAATGGCTCTTCTCAGCCGATGATCAATGGACTACCACATGCCGAAG
AGCTGGAGCCGCCTAGCCATACTCAAGAGAGTGCTCTTCCTGCGTCAGCA
GAAACAACCTCTAACACCGATAACCTATTCTTGGCTGCATCCATTGATGG
TACTATTCGAGTGTGGGATAGAAGAGAGCCAGACGCCGTTGCTCGCATCA
CTTCTCAAAACTGCCCACCTTGGTGCATGAATGCCTGCTGGTCTCCAGAC
GGCAACTATATTTATGCAGGCCGCCGTAATGGCACTGTCGAGGAGTACAG
TCTCCATAAGGGCCTCAGGAGTGCAGAACGGACCTTCAAGTTCCCTCAGG
GCAGTGGTCCGGTCACGGCACTCAAGGCGATGCCTAACGGCAGACACATT
GTTTGGTATGTACTTTCGTCGTCATTAATGCTCTACTTCCAGTGACATAT
TGGGCTGACCGTCACTTTGCAGCGCATCGCATGACATTCTGAGATTGTAC
GACCTCAAACATGAGCAAGTGACTCGCCACTCGACGGTGCCTTTCTTGAT
TATCCCGGGACATCGTACCGGAACTGTTTCCCAGCTATACATTGACCAGG
CGTGTCGCTTCATGGTCTCAACAAGTGGCAACAGAGGCTGGGAAGGTAAT
ACCACCGAGGTCTTGCTAGGCTATGAGATTGGGGTTCCTGGATAAGCGGT
CTGCCTGCTGCCTTGTAAAAGGGTAAGTGTGTCGTATCATCTGTGGCCTT
GAAGATATGTGAACACTAATGGTTATATTTGGGCATCAGTGACACCCTTT
GGGTATACAGTAGAATTGGAGTTCTTTCTTGGACATAAGTTTGAGATGGA
AACGATGACCCAGACATCGCCTCTGCCACGAAACATGCATGGATGACTAA
TGTGAATGACATGAATGCAGTCCCCTGATACTAGACAACCTGATTTCGAT
ATACGATAGTATCTTGGCATAATACATGATTCATATACACATGACTGCAT
AAAGTATCGCCACGTGCCTCAGAGGACACACATAAATATGGACACGAAAA
CCACCAATATTCCCGATATATATACCTCAACTCCCATGGGAACCTGGAAT
GCCAGTGACTCGCTTTCTTTTGAGCCATCAATACAATCGCCTAAAATGAA
ACCCGCAAACGCCATAGAAGCCAGCCAATATGCAAAAGCAAAGAAACAAG
AAATTCACAAATCATAGTCATCGTGCACTGCATCATCAAGGTTGAGGCCT
TCGCATACCTCATTTTGCCCAACCCGCCAAGATCCGAACAATGGGTTATG
GGTCCATTTAACATGACCTTCATCATCCTGCTCAAAATATACATAGCCTG
GTTGCTCATCAGAGTTGAAACCATCTTCGTTGGGCGACATTATGCCCTCA
GGTCCCGTGACCAGATGACTAAATCCGGGAACATCTGTGCTTGGAACATG
GCCACGAGCTTCGATATGGCCGTTTTCCACACTGTTCACCGTAATCAGGT
ATACAGGAGGCAGGGCTGAGTCTCTCTCTGCTCTCAGGGGCATAGGGAGC
CAGGCTTCATTGTTGAAAGATTCGGGTCTGTTCTTGTCATGTCGCAATGG
CAGCGGTCTGGAGAGAAGCATAGCATCCAACTTGGCGGTGTCGAGCAGCA
AACCAGGCGTTTGCACATAGAGGACACTGTCATATTGCATAAACTGAATC
TGTCCCAGCCGCAGCAGCTTTGTATCGGTAGGCTTGTAGCCTTCAGAAGT
GGCTAGCGTCATATCAATGGGCAGAAGCCATATGCCGTACTCAAGACTTG
CCGTTCTCAGCAGAGAGAGGGCCGTGGCGACCGGTTCGGTAAGCTCCTTA
GTGGGCATCAGGTCCCACTCACGCGGATACATGAACAGCCTGTCCTGGAC
TGCAGTACCATTGGTCGCTAGGTGCTTAAAGAAGAGGATGGCGGAGCAGA
TGTTAGACGGATCGGGAGTGGAGAGAAGCTGGAGGTATGCAAAGTTGCCT
GTCGTTGCTTGTGTGGAACCAGCATCATCATCCCTCTTTTGCTGCTTATC
GGCGACTCTATCGGAGAGGAACTCTTGCTCGGCCCCTTGGTATGTTCCCA
CCGGAACCGCCGCCGGGGGTGGAGGAGGCGGTCGGATGGCATGCTGAATA
CTTCGGACGGACTGCTGTTGCAGGACATACCCCGAAAGGAAGAGCAAAAA
AGTAAAGGTACAAATGACTGCAGTGGATATGATGACCGAGACCGTCGACG
AAGTAAGAAGCACCATGACTGTCTGACCCCCCGAATTAATCGCTTAGTGC
GTGTCTGTGTATACCCGTCGTACGTAGCCTGTGGAGACTGGATGGTAGGC
AGCACTGTTTTGATATGCACTAGTAACTGCTTCGAAGTGCCCGGACTATA
CAGCCAGTATACGAGTAATTTTCAATTCGAACCAGATGGGAAATCCAGCG
ATCATGATAGTTGATAGCAGCATGAGTTTCCAAC back to topCoding sequence (CDS) from alignment at ch4:904063..908246+ >KJC3_004853-T1 ID=KJC3_004853-T1|Name=KJC3_004853-T1|organism=Aspergillus niger KJC3|type=CDS|length=5760bp|location=Sequence derived from alignment at ch4:904063..908246+ (Aspergillus niger KJC3)
ATGGCTTCGATTGAAGATGACGACGATCGCGACCTTGCAGGCTCTCAAGA
CGGAAGCTCGGACAATGAAATGGAGGATACACTTCGGGATGCAGACGATG
GGGGTAACGACAACGAACCTGATCCCGACGCGGACGCCGACCAAGATGCG
GAAAGCCAGTCCAATGCCAGTCATGCATCGGAAAGCGCTGGGGTAGCGAC
GCAACCGAACCCTGATGTCGAAATGTCTAATACAACTGCTGCGAATTCCT
TTTCTGATCCGAGAGCTGCTTTCCATCCGAGCGTGCGGGAGAAATGCCTG
ACGGCGCCTACGTTCGATATAGTCCCAACTACGGCCGCCCCTCACAGTAC
TTCGATCAATGCGGTAACTGCGACCGCTGACATGAGATGGGTTTTCAGCG
GCGGCTCCGATGGATACGTTCGGAAGTTCAATTGGGTGGATTCTGTCAAC
AGCAAGCTGATGCTCACTGTGGCGCAAAGACACCCTTTCGTCGACAGTGT
CATCAAGGCGGGTGTGCTAATGACATACTGGGAAAATATGGATGGGAACA
CAATATCGCCAGTATACTCTTTGGCTAGCCACAGTGAGGGTCTATGGTTG
TTGTCCGGCTTGGAATCCGGTAGCATCCGTCTGCAATCAGTCCGTCACGA
TGAAGGAAAAGAGATCGCTCTTCTGCAGCAGCATACATCCGCAGTCTCTG
TACTGAGCTTGACTTCAGATGAAAAGTCCCTACTGTCCGGCAGCTGGGAC
AAGCGAGTTTTTGACTGGGACCTTAACACAGGGCAGACGCGACGCGCATT
TGGGTCTAGTGCCGGGCAAATATCTGCGGTCGAGATACGACCAGAATCCA
GTCTGCCAGTTCCCAGGGATACAACCGAGATCCAGCAAACAAATGGAACA
TACTCGTCCAATTACCAGGCTCCTGAGAATGGCAGCTTTAACTTCATGGA
TACGTCGAACGACGGTGAAAACGGCGCTGGTTCAAACCCGCAGGCGGGCT
CTCCGGCCGATTCACTCTTCGGCGGGGCCGACTCGCTATTCGGCGACGAG
AACGGGAATGGAGGCGACGAGGCCGGCGCATCTGGAAATGCTTTCGGCAT
TGATGAGGATGATGAGTTTGGTAAAGCTCTAACTAATGGAGTGTTGCCAG
ATGCCGATGCCCCTGGAGAACCGGAACCGAGTCAGAACGGCGTTGCAGAG
GCTCCTGCTGCTCCGGCTCCGGCTCCGGCTGCGGCTGGTACTGAAGCCGC
AACTGTTAATGATATTGCCGCCACTCACCCCCCGGCGGAGATGCCTAATG
GCTCTTCTCAGCCGATGATCAATGGACTACCACATGCCGAAGAGCTGGAG
CCGCCTAGCCATACTCAAGAGAGTGCTCTTCCTGCGTCAGCAGAAACAAC
CTCTAACACCGATAACCTATTCTTGGCTGCATCCATTGATGGTACTATTC
GAGTGTGGGATAGAAGAGAGCCAGACGCCGTTGCTCGCATCACTTCTCAA
AACTGCCCACCTTGGTGCATGAATGCCTGCTGGTCTCCAGACGGCAACTA
TATTTATGCAGGCCGCCGTAATGGCACTGTCGAGGAGTACAGTCTCCATA
AGGGCCTCAGGAGTGCAGAACGGACCTTCAAGTTCCCTCAGGGCAGTGGT
CCGGTCACGGCACTCAAGGCGATGCCTAACGGCAGACACATTGTTTGCGC
ATCGCATGACATTCTGAGATTGTACGACCTCAAACATGAGCAAGTGACTC
GCCACTCGACGGTGCCTTTCTTGATTATCCCGGGACATCGTACCGGAACT
GTTTCCCAGCTATACATTGACCAGGCGTGTCGCTTCATGGTCTCAACAAG
TGGCAACAGAGGCTGGGAAGGTAATACCACCGAGGTCTTGCTAGGCTATG
AGATTGGGGTTCCTGGATAAATGGCTTCGATTGAAGATGACGACGATCGC
GACCTTGCAGGCTCTCAAGACGGAAGCTCGGACAATGAAATGGAGGATAC
ACTTCGGGATGCAGACGATGGGGGTAACGACAACGAACCTGATCCCGACG
CGGACGCCGACCAAGATGCGGAAAGCCAGTCCAATGCCAGTCATGCATCG
GAAAGCGCTGGGGTAGCGACGCAACCGAACCCTGATGTCGAAATGTCTAA
TACAACTGCTGCGAATTCCTTTTCTGATCCGAGAGCTGCTTTCCATCCGA
GCGTGCGGGAGAAATGCCTGACGGCGCCTACGTTCGATATAGTCCCAACT
ACGGCCGCCCCTCACAGTACTTCGATCAATGCGGTAACTGCGACCGCTGA
CATGAGATGGGTTTTCAGCGGCGGCTCCGATGGATACGTTCGGAAGTTCA
ATTGGGTGGATTCTGTCAACAGCAAGCTGATGCTCACTGTGGCGCAAAGA
CACCCTTTCGTCGACAGTGTCATCAAGGCGGGTGTGCTAATGACATACTG
GGAAAATATGGATGGGAACACAATATCGCCAGTATACTCTTTGGCTAGCC
ACAGTGAGGGTCTATGGTTGTTGTCCGGCTTGGAATCCGGTAGCATCCGT
CTGCAATCAGTCCGTCACGATGAAGGAAAAGAGATCGCTCTTCTGCAGCA
GCATACATCCGCAGTCTCTGTACTGAGCTTGACTTCAGATGAAAAGTCCC
TACTGTCCGGCAGCTGGGACAAGCGAGTTTTTGACTGGGACCTTAACACA
GGGCAGACGCGACGCGCATTTGGGTCTAGTGCCGGGCAAATATCTGCGGT
CGAGATACGACCAGAATCCAGTCTGCCAGTTCCCAGGGATACAACCGAGA
TCCAGCAAACAAATGGAACATACTCGTCCAATTACCAGGCTCCTGAGAAT
GGCAGCTTTAACTTCATGGATACGTCGAACGACGGTGAAAACGGCGCTGG
TTCAAACCCGCAGGCGGGCTCTCCGGCCGATTCACTCTTCGGCGGGGCCG
ACTCGCTATTCGGCGACGAGAACGGGAATGGAGGCGACGAGGCCGGCGCA
TCTGGAAATGCTTTCGGCATTGATGAGGATGATGAGTTTGGTAAAGCTCT
AACTAATGGAGTGTTGCCAGATGCCGATGCCCCTGGAGAACCGGAACCGA
GTCAGAACGGCGTTGCAGAGGCTCCTGCTGCTCCGGCTCCGGCTCCGGCT
GCGGCTGGTACTGAAGCCGCAACTGTTAATGATATTGCCGCCACTCACCC
CCCGGCGGAGATGCCTAATGGCTCTTCTCAGCCGATGATCAATGGACTAC
CACATGCCGAAGAGCTGGAGCCGCCTAGCCATACTCAAGAGAGTGCTCTT
CCTGCGTCAGCAGAAACAACCTCTAACACCGATAACCTATTCTTGGCTGC
ATCCATTGATGGTACTATTCGAGTGTGGGATAGAAGAGAGCCAGACGCCG
TTGCTCGCATCACTTCTCAAAACTGCCCACCTTGGTGCATGAATGCCTGC
TGGTCTCCAGACGGCAACTATATTTATGCAGGCCGCCGTAATGGCACTGT
CGAGGAGTACAGTCTCCATAAGGGCCTCAGGAGTGCAGAACGGACCTTCA
AGTTCCCTCAGGGCAGTGGTCCGGTCACGGCACTCAAGGCGATGCCTAAC
GGCAGACACATTGTTTGCGCATCGCATGACATTCTGAGATTGTACGACCT
CAAACATGAGCAAGTGACTCGCCACTCGACGGTGCCTTTCTTGATTATCC
CGGGACATCGTACCGGAACTGTTTCCCAGCTATACATTGACCAGGCGTGT
CGCTTCATGGTCTCAACAAGTGGCAACAGAGGCTGGGAAGGTAATACCAC
CGAGGTCTTGCTAGGCTATGAGATTGGGGTTCCTGGATAAATGGCTTCGA
TTGAAGATGACGACGATCGCGACCTTGCAGGCTCTCAAGACGGAAGCTCG
GACAATGAAATGGAGGATACACTTCGGGATGCAGACGATGGGGGTAACGA
CAACGAACCTGATCCCGACGCGGACGCCGACCAAGATGCGGAAAGCCAGT
CCAATGCCAGTCATGCATCGGAAAGCGCTGGGGTAGCGACGCAACCGAAC
CCTGATGTCGAAATGTCTAATACAACTGCTGCGAATTCCTTTTCTGATCC
GAGAGCTGCTTTCCATCCGAGCGTGCGGGAGAAATGCCTGACGGCGCCTA
CGTTCGATATAGTCCCAACTACGGCCGCCCCTCACAGTACTTCGATCAAT
GCGGTAACTGCGACCGCTGACATGAGATGGGTTTTCAGCGGCGGCTCCGA
TGGATACGTTCGGAAGTTCAATTGGGTGGATTCTGTCAACAGCAAGCTGA
TGCTCACTGTGGCGCAAAGACACCCTTTCGTCGACAGTGTCATCAAGGCG
GGTGTGCTAATGACATACTGGGAAAATATGGATGGGAACACAATATCGCC
AGTATACTCTTTGGCTAGCCACAGTGAGGGTCTATGGTTGTTGTCCGGCT
TGGAATCCGGTAGCATCCGTCTGCAATCAGTCCGTCACGATGAAGGAAAA
GAGATCGCTCTTCTGCAGCAGCATACATCCGCAGTCTCTGTACTGAGCTT
GACTTCAGATGAAAAGTCCCTACTGTCCGGCAGCTGGGACAAGCGAGTTT
TTGACTGGGACCTTAACACAGGGCAGACGCGACGCGCATTTGGGTCTAGT
GCCGGGCAAATATCTGCGGTCGAGATACGACCAGAATCCAGTCTGCCAGT
TCCCAGGGATACAACCGAGATCCAGCAAACAAATGGAACATACTCGTCCA
ATTACCAGGCTCCTGAGAATGGCAGCTTTAACTTCATGGATACGTCGAAC
GACGGTGAAAACGGCGCTGGTTCAAACCCGCAGGCGGGCTCTCCGGCCGA
TTCACTCTTCGGCGGGGCCGACTCGCTATTCGGCGACGAGAACGGGAATG
GAGGCGACGAGGCCGGCGCATCTGGAAATGCTTTCGGCATTGATGAGGAT
GATGAGTTTGGTAAAGCTCTAACTAATGGAGTGTTGCCAGATGCCGATGC
CCCTGGAGAACCGGAACCGAGTCAGAACGGCGTTGCAGAGGCTCCTGCTG
CTCCGGCTCCGGCTCCGGCTGCGGCTGGTACTGAAGCCGCAACTGTTAAT
GATATTGCCGCCACTCACCCCCCGGCGGAGATGCCTAATGGCTCTTCTCA
GCCGATGATCAATGGACTACCACATGCCGAAGAGCTGGAGCCGCCTAGCC
ATACTCAAGAGAGTGCTCTTCCTGCGTCAGCAGAAACAACCTCTAACACC
GATAACCTATTCTTGGCTGCATCCATTGATGGTACTATTCGAGTGTGGGA
TAGAAGAGAGCCAGACGCCGTTGCTCGCATCACTTCTCAAAACTGCCCAC
CTTGGTGCATGAATGCCTGCTGGTCTCCAGACGGCAACTATATTTATGCA
GGCCGCCGTAATGGCACTGTCGAGGAGTACAGTCTCCATAAGGGCCTCAG
GAGTGCAGAACGGACCTTCAAGTTCCCTCAGGGCAGTGGTCCGGTCACGG
CACTCAAGGCGATGCCTAACGGCAGACACATTGTTTGCGCATCGCATGAC
ATTCTGAGATTGTACGACCTCAAACATGAGCAAGTGACTCGCCACTCGAC
GGTGCCTTTCTTGATTATCCCGGGACATCGTACCGGAACTGTTTCCCAGC
TATACATTGACCAGGCGTGTCGCTTCATGGTCTCAACAAGTGGCAACAGA
GGCTGGGAAGGTAATACCACCGAGGTCTTGCTAGGCTATGAGATTGGGGT
TCCTGGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004853-T1.utr5p1 | KJC3_004853-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092614UB |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:904063..908246 + |
|
