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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:941218..942121- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004866-T1 ID=KJC3_004866-T1|Name=KJC3_004866-T1|organism=Aspergillus niger KJC3|type=mRNA|length=904bp|location=Sequence derived from alignment at ch4:941218..942121- (Aspergillus niger KJC3)
CCGGTATTGTTCCTGCTTGTCAGTTGGCTGAGCAATTCGGCCATTGTTGT
TCGCCAAAATGCCGAGTTCCTGCCAAGAGATCAGTACGTTTGACCCTTAT
ATCCTTTACCATACTCTTAAATTGCGGCTTGGATACTCGACGTATCCCCG
AACGGAGATCACCACCTCATTGTCCCCAACTTCAGCTTCAGCTCCACACT
CTCTAATCAATCTCACCCGGATGAACAGGAAATGCTCTGGCCCAATGTCT
CCAAGAATCAGACTGCATCATGGTGCAACGGCGCTCGCCCCGCGAATGTC
TGAGTGAGCCGTACGTCGACGAGCTTCCCATGCGATGCCAGCAATTGCGG
AAGGGATTCAGCGAGTGCAAGTGAGTAAAGAGCCGCTACCTTCTTGTAAA
ACGCAATCACCGCCAAGTCATCAGGGTTACTAACTGTTTGTCCTTCTATA
GACGCGGCCTGATCGATATGCGCAAGCGGTTCCGCGGAAACCAGCCCATC
TCGGTATCGACGACGGAAGGCGGCGGCTCCAGCTCGTCCCAGCAGCTATA
TGCGGGCAAGCCGGCGTTTGAGACGGTCAAGGAAATTAGCGGTGATGAGG
TGCAGATGGATCCGGAGAAGACTCGTGGTCTGTGAGGGGGGTTCGTTATA
TCTGGTGTCCTGAGTGATGGTGACACAGATTGGTTTCCCTAGTGCACTGT
AACATCATGTTGTGCTTTTGTTGTTTTCGCTGGCATTTGGCTTGGAGTTT
GGATGATTGTTTGATTGTTGGGACTACTTCGCTCATGTACCCAAGCCCTG
ATAGTGTGTATGAGTATCAGGTTATGGGGATTTACACCATATTATACTAC
TAGATTGTACATATGCAATGTATGGGTCTCGTCTGACCACGCAGACTGAC
TTGG back to topCoding sequence (CDS) from alignment at ch4:941218..942121- >KJC3_004866-T1 ID=KJC3_004866-T1|Name=KJC3_004866-T1|organism=Aspergillus niger KJC3|type=CDS|length=1053bp|location=Sequence derived from alignment at ch4:941218..942121- (Aspergillus niger KJC3)
ACGCGGCCTGATCGATATGCGCAAGCGGTTCCGCGGAAACCAGCCCATCT
CGGTATCGACGACGGAAGGCGGCGGCTCCAGCTCGTCCCAGCAGCTATAT
GCGGGCAAGCCGGCGTTTGAGACGGTCAAGGAAATTAGCGGTGATGAGGT
GCAGATGGATCCGGAGAAGACTCGTGGTCTGTGAGAAATGCTCTGGCCCA
ATGTCTCCAAGAATCAGACTGCATCATGGTGCAACGGCGCTCGCCCCGCG
AATGTCTGAGTGAGCCGTACGTCGACGAGCTTCCCATGCGATGCCAGCAA
TTGCGGAAGGGATTCAGCGAGTGCAAATGCCGAGTTCCTGCCAAGAGATC
AACGCGGCCTGATCGATATGCGCAAGCGGTTCCGCGGAAACCAGCCCATC
TCGGTATCGACGACGGAAGGCGGCGGCTCCAGCTCGTCCCAGCAGCTATA
TGCGGGCAAGCCGGCGTTTGAGACGGTCAAGGAAATTAGCGGTGATGAGG
TGCAGATGGATCCGGAGAAGACTCGTGGTCTGTGAGAAATGCTCTGGCCC
AATGTCTCCAAGAATCAGACTGCATCATGGTGCAACGGCGCTCGCCCCGC
GAATGTCTGAGTGAGCCGTACGTCGACGAGCTTCCCATGCGATGCCAGCA
ATTGCGGAAGGGATTCAGCGAGTGCAAATGCCGAGTTCCTGCCAAGAGAT
CAACGCGGCCTGATCGATATGCGCAAGCGGTTCCGCGGAAACCAGCCCAT
CTCGGTATCGACGACGGAAGGCGGCGGCTCCAGCTCGTCCCAGCAGCTAT
ATGCGGGCAAGCCGGCGTTTGAGACGGTCAAGGAAATTAGCGGTGATGAG
GTGCAGATGGATCCGGAGAAGACTCGTGGTCTGTGAGAAATGCTCTGGCC
CAATGTCTCCAAGAATCAGACTGCATCATGGTGCAACGGCGCTCGCCCCG
CGAATGTCTGAGTGAGCCGTACGTCGACGAGCTTCCCATGCGATGCCAGC
AATTGCGGAAGGGATTCAGCGAGTGCAAATGCCGAGTTCCTGCCAAGAGA
TCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004866-T1.utr3p1 | KJC3_004866-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004866-T1.utr5p1 | KJC3_004866-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265I72 |
| DBxref | InterPro:IPR018793 |
| DBxref | PFAM:PF10203 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:941218..942121 - |
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