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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:942428..943905+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004867-T1 ID=KJC3_004867-T1|Name=KJC3_004867-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1478bp|location=Sequence derived from alignment at ch4:942428..943905+ (Aspergillus niger KJC3)
ATGGCGCGCGTTCCGGTCATTGGACGGCTGTTTTGGTTCGAGTATTTGGC
CCTTTTTGGGTCGCTGATTTTGGTATTGCTGGAATGGGTTATACATATTA
TCACATTCTGTCTGCGTAAGTAGTGTGTTCATTCTCTGGAATTGTGGTCT
ATGTCGAGGGGCAAGAGCTAACTGACGCAGCTGAACCTGTTATTAAGTTC
TGTTACGATCGATCCAAGACTATCTTCAACGCCTTCATTCCTCCCGATGA
CCCGGCTAAGCGCGGTAAAGAAGAGAAAATTGCTGCGTCGGTTGCTCTGG
CGTCGGACTTCACGGATATATGCGCGCTGTTCGGATATGAGGCGGAGGAA
CATATCGTCCAGACAGGGGATGGCTATCTGCTTGGTCTGCACCGACTGCC
CTATCGGAAAGGAGAGGAGGGGAGGAAGATCAACCAGGGCGAAGGGAGCA
TCAAGAAGAAGGTCGTCTATCTCCACCATGGTCTCATGATGTGCAGTGAA
GTCTGGATCTGTCTGTCAGAGGAGCAGCGATGCCTTCCGTTTCAATTAGT
CGAAAGGGGCTATGACGTGTGGTTGGGGAACAATAGAGGAAACAAGTACT
CGAAGAAGTCCGTCAAGCATTCGCCCCTGTCGAACGAGTTCTGGGACTTT
TCGATCGATCAGTTCTCGTTCCATGATATCCCAGACAGCATCAAGTATAT
CCTGGAAGTGACAGGGCAGCCCTCCCTGTCATACGTGGGGTTCTCGCAGG
GAACAGCGCAGGCATTTGCGACGCTGTCCATTCATCCTTTGTTGAATCAG
AAGATCGATGTCTTTGTGGCTCTCGCGCCGGCAATGGCTCCGACAGGTCT
TCCAAATCATCTCGTGGACTCGCTCATGAAGGCTTCGCCGAACTTCCTGT
TTCTGCTGTTTGGCAGACGCAGCATCCTTAGCTCAACGACGATGTGGCAG
ACAATTCTCTACCCGCCTATCTTTGTTTGGATCATCGACACGTCACTTCG
CGGCCTGTTCAATTGGAGGTGCAAGAACATCAGCCGCTGGCAGAAGCTGG
CAGGGTACCTGCATCTGTTTTCCTTCACTAGCACCAAGTCGGTCGTCCAT
TGGTTCCAGATTATTCGGCACCGGAATTTCCAGTTCTACGATGACGAAAT
CCATGCCCCGCTCAGTATTGTGGCCAGTGAGCGATTTTACAAGCCGGTCA
AGTACCCGACTAAGAACATTAAGACGCCCATTGTCCTGTTGTATGGCGGT
AGCGATAGTCTCGTTGATATCAACGTGATGTTGTCCGAGCTCCCTCGCGG
GACCGTGGCGAAGGAAATCCCGCAGTATGAGCATTTAGATTTCTTGTGGG
CGCGTGATGTGGACCAATTGGTATTCAACCATGTCTTCGAAGCGCTGGAG
CGGTACAGCTCGGAGAATCAGAAAGGGACATTGATGGAGAAGGTTAATGG
TGCCGCGGGCACATATGTACCGACATAA back to topCoding sequence (CDS) from alignment at ch4:942428..943905+ >KJC3_004867-T1 ID=KJC3_004867-T1|Name=KJC3_004867-T1|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch4:942428..943905+ (Aspergillus niger KJC3)
ATGGCGCGCGTTCCGGTCATTGGACGGCTGTTTTGGTTCGAGTATTTGGC
CCTTTTTGGGTCGCTGATTTTGGTATTGCTGGAATGGGTTATACATATTA
TCACATTCTGTCTGCCTGAACCTGTTATTAAGTTCTGTTACGATCGATCC
AAGACTATCTTCAACGCCTTCATTCCTCCCGATGACCCGGCTAAGCGCGG
TAAAGAAGAGAAAATTGCTGCGTCGGTTGCTCTGGCGTCGGACTTCACGG
ATATATGCGCGCTGTTCGGATATGAGGCGGAGGAACATATCGTCCAGACA
GGGGATGGCTATCTGCTTGGTCTGCACCGACTGCCCTATCGGAAAGGAGA
GGAGGGGAGGAAGATCAACCAGGGCGAAGGGAGCATCAAGAAGAAGGTCG
TCTATCTCCACCATGGTCTCATGATGTGCAGTGAAGTCTGGATCTGTCTG
TCAGAGGAGCAGCGATGCCTTCCGTTTCAATTAGTCGAAAGGGGCTATGA
CGTGTGGTTGGGGAACAATAGAGGAAACAAGTACTCGAAGAAGTCCGTCA
AGCATTCGCCCCTGTCGAACGAGTTCTGGGACTTTTCGATCGATCAGTTC
TCGTTCCATGATATCCCAGACAGCATCAAGTATATCCTGGAAGTGACAGG
GCAGCCCTCCCTGTCATACGTGGGGTTCTCGCAGGGAACAGCGCAGGCAT
TTGCGACGCTGTCCATTCATCCTTTGTTGAATCAGAAGATCGATGTCTTT
GTGGCTCTCGCGCCGGCAATGGCTCCGACAGGTCTTCCAAATCATCTCGT
GGACTCGCTCATGAAGGCTTCGCCGAACTTCCTGTTTCTGCTGTTTGGCA
GACGCAGCATCCTTAGCTCAACGACGATGTGGCAGACAATTCTCTACCCG
CCTATCTTTGTTTGGATCATCGACACGTCACTTCGCGGCCTGTTCAATTG
GAGGTGCAAGAACATCAGCCGCTGGCAGAAGCTGGCAGGGTACCTGCATC
TGTTTTCCTTCACTAGCACCAAGTCGGTCGTCCATTGGTTCCAGATTATT
CGGCACCGGAATTTCCAGTTCTACGATGACGAAATCCATGCCCCGCTCAG
TATTGTGGCCAGTGAGCGATTTTACAAGCCGGTCAAGTACCCGACTAAGA
ACATTAAGACGCCCATTGTCCTGTTGTATGGCGGTAGCGATAGTCTCGTT
GATATCAACGTGATGTTGTCCGAGCTCCCTCGCGGGACCGTGGCGAAGGA
AATCCCGCAGTATGAGCATTTAGATTTCTTGTGGGCGCGTGATGTGGACC
AATTGGTATTCAACCATGTCTTCGAAGCGCTGGAGCGGTACAGCTCGGAG
AATCAGAAAGGGACATTGATGGAGAAGGTTAATGGTGCCGCGGGCACATA
TGTACCGACATAAATGGCGCGCGTTCCGGTCATTGGACGGCTGTTTTGGT
TCGAGTATTTGGCCCTTTTTGGGTCGCTGATTTTGGTATTGCTGGAATGG
GTTATACATATTATCACATTCTGTCTGCCTGAACCTGTTATTAAGTTCTG
TTACGATCGATCCAAGACTATCTTCAACGCCTTCATTCCTCCCGATGACC
CGGCTAAGCGCGGTAAAGAAGAGAAAATTGCTGCGTCGGTTGCTCTGGCG
TCGGACTTCACGGATATATGCGCGCTGTTCGGATATGAGGCGGAGGAACA
TATCGTCCAGACAGGGGATGGCTATCTGCTTGGTCTGCACCGACTGCCCT
ATCGGAAAGGAGAGGAGGGGAGGAAGATCAACCAGGGCGAAGGGAGCATC
AAGAAGAAGGTCGTCTATCTCCACCATGGTCTCATGATGTGCAGTGAAGT
CTGGATCTGTCTGTCAGAGGAGCAGCGATGCCTTCCGTTTCAATTAGTCG
AAAGGGGCTATGACGTGTGGTTGGGGAACAATAGAGGAAACAAGTACTCG
AAGAAGTCCGTCAAGCATTCGCCCCTGTCGAACGAGTTCTGGGACTTTTC
GATCGATCAGTTCTCGTTCCATGATATCCCAGACAGCATCAAGTATATCC
TGGAAGTGACAGGGCAGCCCTCCCTGTCATACGTGGGGTTCTCGCAGGGA
ACAGCGCAGGCATTTGCGACGCTGTCCATTCATCCTTTGTTGAATCAGAA
GATCGATGTCTTTGTGGCTCTCGCGCCGGCAATGGCTCCGACAGGTCTTC
CAAATCATCTCGTGGACTCGCTCATGAAGGCTTCGCCGAACTTCCTGTTT
CTGCTGTTTGGCAGACGCAGCATCCTTAGCTCAACGACGATGTGGCAGAC
AATTCTCTACCCGCCTATCTTTGTTTGGATCATCGACACGTCACTTCGCG
GCCTGTTCAATTGGAGGTGCAAGAACATCAGCCGCTGGCAGAAGCTGGCA
GGGTACCTGCATCTGTTTTCCTTCACTAGCACCAAGTCGGTCGTCCATTG
GTTCCAGATTATTCGGCACCGGAATTTCCAGTTCTACGATGACGAAATCC
ATGCCCCGCTCAGTATTGTGGCCAGTGAGCGATTTTACAAGCCGGTCAAG
TACCCGACTAAGAACATTAAGACGCCCATTGTCCTGTTGTATGGCGGTAG
CGATAGTCTCGTTGATATCAACGTGATGTTGTCCGAGCTCCCTCGCGGGA
CCGTGGCGAAGGAAATCCCGCAGTATGAGCATTTAGATTTCTTGTGGGCG
CGTGATGTGGACCAATTGGTATTCAACCATGTCTTCGAAGCGCTGGAGCG
GTACAGCTCGGAGAATCAGAAAGGGACATTGATGGAGAAGGTTAATGGTG
CCGCGGGCACATATGTACCGACATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0208659 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR006693 |
| DBxref | PFAM:PF04083 |
| DBxref | PFAM:PF00561 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:942428..943905 + |
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