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KJC3_004870-T1, KJC3_004870-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004870-T1
Unique NameKJC3_004870-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:951125..953036-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004870-T1 ID=KJC3_004870-T1|Name=KJC3_004870-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1912bp|location=Sequence derived from alignment at ch4:951125..953036- (Aspergillus niger KJC3)
CAGGCAGCAGTGATACTGGGCTATAAAGGGGGCATCTGTCTACTGCATTT
CAACTCTTCAATCCTGCAGCTTCATCCCAACACAGCTTCTGTTCCATATC
TGCTTTCATTCACACGATGGCATCTTACCCAGAGAATGTCGGCATTAAGG
CCATGGAGATCTATGTCCCAGCCCAGGTAATGCAATCCTTCCTCTCCTAG
GAGTCTGTCTGATTGCCTGATCAAACAGTGTCTGGATCAAATCCTCTTCG
AGAAACACCAAGGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTC
AAGTGCATGAATTACTGCACCGATAGAGAGGGTATGTTCTAATCAAAATA
CACCATCCTGTCTTTTCAAGTACTGAGAATTCCAACTAACCAACCGTTCA
GATGTTTGCTCTCTAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATA
CAGCATTGACCCCAACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCC
TGATCGACAAGGCCAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAG
CCTTCCGGCAACACAAGCATTGAAGGTATTGACACTATTCACGCCTGCTA
CGGCGGAACTAATGCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGT
CCTGGGACGGGCGAGACGCCATCGTCGTAGCATCCGACATTGCCCTCTAC
AAAGAGTCTTCCAGTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCT
CGTGGGCCCCAACGCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCT
ATATGACACACACGTACGACTTCTACAAACCAGACCTCAAATCAGAGTTC
CCTCTCGTCAATGGCCATGAATCAATCACTTGCTATATCCGCGCCCTGGA
CGGATGCCACAAGGACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACG
TCGAGAATGTCCTCGACCTCTTCGACTACATGGCCTTCCATACTCCAAAC
TGCAAGCTAGTCAGCAAGTCGTACGGTCGACTCAAATATGACGACCTTCT
ACACCAGTCGAGCTCGAACCCAGACACAGATCTGACTGCAATCCCACCTG
AGCTCCGCACCCTGACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAG
AAGACCCTTGTAGCTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCC
ATGCATCGCTGCGCCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCT
ATTGCTCACTCATCAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAG
GGGAAAACTATTGGCATGTTTAGTGTAAGTCACACCCATGTCCCCAAATT
GAACTATATATCCATCAGTTCTAACGCATATTGTGGATAAAGTACGGCAG
CGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACC
CCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGACATATC
GCTACGCCCGAGGAATATGAAGAGGTAAGCCAACAGAATTATGTAGCTTT
CTCGATCCTTTGGTGATCAAGTTGTTGCTCTATACTGATACAGTGTATAT
CAAGGCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGACTATACTC
CATCTGGAGACATAGCCTCCCTAGCACCGGGAACATACTACTTGGAGAAA
ATTGATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGATCTCGAGG
TCATTAATTTGAGGGAGTGATTCTTTTCTGTTGCTGTGCTATTGAATTAA
TGGTGTCTTTCTTTCGCAAAATAATTTTCCCTACCTCATTCCATGGAAAC
TTCTTCAGAGGCAATGGATGATTCAATGAATAGAAGTAGATTGCTTTTAT
CATTTCGAAATA
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Coding sequence (CDS) from alignment at ch4:951125..953036-

>KJC3_004870-T1 ID=KJC3_004870-T1|Name=KJC3_004870-T1|organism=Aspergillus niger KJC3|type=CDS|length=5040bp|location=Sequence derived from alignment at ch4:951125..953036- (Aspergillus niger KJC3)
TACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGA
CCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGA
GACATATCGCTACGCCCGAGGAATATGAAGAGGTAAGCCAACAGAATTAT
GTAGCTTTCTCGATCCTTTGGTGAATGTTTGCTCTCTAGCACTAACAGCC
GTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGTCG
TCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAAGT
CCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAGGT
ATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAACGC
TATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGTCG
TAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCGGT
GGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCCCT
GGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTACA
AACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAATC
ACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGTCG
CAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGACT
ACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACGGT
CGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGACAC
AGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGAAT
CCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAGAT
CAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGTGG
AAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAGTA
ATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTTGT
CTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAGTA
CACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGATAGAGAGG
ATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGT
CCCAGCCCAGTACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAG
TAACCGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGC
CTGAATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGGTAAGCCA
ACAGAATTATGTAGCTTTCTCGATCCTTTGGTGAATGTTTGCTCTCTAGC
ACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACT
CCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAG
TCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAG
CATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTC
TCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGAC
GCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCG
TCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGC
TCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTAC
GACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCA
TGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACC
TCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGAC
CTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAA
GTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGA
ACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACC
TACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCT
GACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCT
CTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGC
TTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCAT
GTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAG
CCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACC
GATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGG
AGATCTATGTCCCAGCCCAGTACGGCAGCGGTCTAGCCAGCACTCTCTTC
GCCTTCAAAGTAACCGGCGACCTAAACCCCATGGTTGAGAAAATCGATCT
CATGAACCGCCTGAATCAGAGACATATCGCTACGCCCGAGGAATATGAAG
AGGTAAGCCAACAGAATTATGTAGCTTTCTCGATCCTTTGGTGAATGTTT
GCTCTCTAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATT
GACCCCAACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGA
CAAGGCCAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCG
GCAACACAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGA
ACTAATGCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGA
CGGGCGAGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGT
CTTCCAGTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGC
CCCAACGCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGAC
ACACACGTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCG
TCAATGGCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGC
CACAAGGACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAA
TGTCCTCGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGC
TAGTCAGCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAG
TCGAGCTCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCG
CACCCTGACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCC
TTGTAGCTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATC
GCTGCGCCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTC
ACTCATCAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAA
CTATTGGCATGTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAA
GGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAA
TTACTGCACCGATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATT
AAGGCCATGGAGATCTATGTCCCAGCCCAGTACGGCAGCGGTCTAGCCAG
CACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCATGGTTGAGA
AAATCGATCTCATGAACCGCCTGAATCAGAGACATATCGCTACGCCCGAG
GAATATGAAGAGGTAAGCCAACAGAATTATGTAGCTTTCTCGATCCTTTG
GTGAATGTTTGCTCTCTAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAA
ATACAGCATTGACCCCAACTCCATCGGTCGTCTCGAAGTAGGCACGGAAT
CCCTGATCGACAAGGCCAAGTCCATCAAGTCCGTTCTTACAACCCTCTTC
GAGCCTTCCGGCAACACAAGCATTGAAGGTATTGACACTATTCACGCCTG
CTACGGCGGAACTAATGCTCTCTTCAACGCTATAAACTGGGTCGAGTCCC
GGTCCTGGGACGGGCGAGACGCCATCGTCGTAGCATCCGACATTGCCCTC
TACAAAGAGTCTTCCAGTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCAT
GCTCGTGGGCCCCAACGCGCTCCTCTCCCTGGACCATAGCATTAGAGGAG
TCTATATGACACACACGTACGACTTCTACAAACCAGACCTCAAATCAGAG
TTCCCTCTCGTCAATGGCCATGAATCAATCACTTGCTATATCCGCGCCCT
GGACGGATGCCACAAGGACCTCCTCCGTCGCAGAAGCGCGAACAACAAGA
ACGTCGAGAATGTCCTCGACCTCTTCGACTACATGGCCTTCCATACTCCA
AACTGCAAGCTAGTCAGCAAGTCGTACGGTCGACTCAAATATGACGACCT
TCTACACCAGTCGAGCTCGAACCCAGACACAGATCTGACTGCAATCCCAC
CTGAGCTCCGCACCCTGACCTACGAAGAATCCCTCAAAGACAAAAATCTA
GAGAAGACCCTTGTAGCTCTGACAAAAGATCAGTTCAAGAAACGGGTCGA
GCCATGCATCGCTGCGCCCTCTTTGTGTGGAAATATGTACACAGGCAGTC
TCTATTGCTCACTCATCAGCTTGATCAGTAATATCGATCTTGCCACTGCG
GAGGGGAAAACTATTGGCATGTTTAGTTGTCTGGATCAAATCCTCTTCGA
GAAACACCAAGGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCA
AGTGCATGAATTACTGCACCGATAGAGAGGATGGCATCTTACCCAGAGAA
TGTCGGCATTAAGGCCATGGAGATCTATGTCCCAGCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004421hydroxymethylglutaryl-CoA synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004870KJC3_004870Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004870-T1KJC3_004870-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004870-T1.cdsKJC3_004870-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004870-T1.utr3p1KJC3_004870-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004870-T1.exon4KJC3_004870-T1.exon4Aspergillus niger KJC3exon
KJC3_004870-T1.exon3KJC3_004870-T1.exon3Aspergillus niger KJC3exon
KJC3_004870-T1.exon2KJC3_004870-T1.exon2Aspergillus niger KJC3exon
KJC3_004870-T1.exon1KJC3_004870-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004870-T1.utr5p1KJC3_004870-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016039
DBxrefInterPro:IPR010122
DBxrefInterPro:IPR013528
DBxrefInterPro:IPR013746
DBxrefPFAM:PF01154
DBxrefPFAM:PF08540
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:951125..953036 -
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