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KJC3_004871-T1, KJC3_004871-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004871-T1
Unique NameKJC3_004871-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:954083..955876-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004871-T1 ID=KJC3_004871-T1|Name=KJC3_004871-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1794bp|location=Sequence derived from alignment at ch4:954083..955876- (Aspergillus niger KJC3)
ATGCGTGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGC CCTTCCCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTT TCCTCGCATTCTCGAGATCTGTTGCCAGCTATACCCATCCTCACCATGCA TCCGCCATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTT CAAGGAGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTC TACATAGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCAC ATCGCAAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGA TCCAGGCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCT ACTCTGACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTT GAAGGCGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGG CACATACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTG CTCAAGAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCA AACCTTCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCG CATTTTCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATAT CCGTCGTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATG AGCGATGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGG ACCTCCTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACC TTGGTGGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTT GCTGTGGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAA CCTCAACTATCCAAAAACGACCGTTACTCTTAAGAACATCCCCGGTGACG CCATCAGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGC ACCAACCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGT CGATGGCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTG TCACTGGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAAC AATGGTATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGA GCTCTGCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTG GCTTCATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGC GCGAAGCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGT CGTATTTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGGTAAGTCC TCGGTCAGACATTATTCTTCTTCCTATCCTGTACTCACTACGTTTGCAGC GGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGAT CGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGC GGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCG GTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCA GACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGG TAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATGTGA
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Coding sequence (CDS) from alignment at ch4:954083..955876-

>KJC3_004871-T1 ID=KJC3_004871-T1|Name=KJC3_004871-T1|organism=Aspergillus niger KJC3|type=CDS|length=3474bp|location=Sequence derived from alignment at ch4:954083..955876- (Aspergillus niger KJC3)
CGGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGA
TCGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGG
CGGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGC
GGTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGC
AGACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGG
GTAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCG
TGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTC
CCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTC
GCATTCTCGAGATCTGTTGCCAGCTATACCCATCCTCACCATGCATCCGC
CATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGG
AGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACAT
AGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGC
AAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAG
GCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCT
GACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGG
CGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACAT
ACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAA
GAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCT
TCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTT
TCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTC
GTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGA
TGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTC
CTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGT
GGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGT
GGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCA
ACTATCCAAAAACGACCGTTACTCTTAAGAACATCCCCGGTGACGCCATC
AGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAA
CCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATG
GCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTGTCACT
GGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGG
TATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCT
GCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTC
ATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAA
GCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTAT
TTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGCGGTCGCGCTTAC
TCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGATCGGTGTCATGGG
CTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGCGGACAGCGGACC
CCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCGGTCTTTTCCTCG
GCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCAGACGAGACGGTT
CCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGGTAGATGCTGATG
TGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCGTGCTCCGTCTCCG
CTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTCCCTCCCGCTGTCT
ACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTCGCATTCTCGAGAT
CTGTTGCCAGCTATACCCATCCTCACCATGCATCCGCCATATCGGCTCTT
CCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGGAGAACGCCCAGCA
AATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACATAGCACAATTTCCC
AAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGCAAGAGGGAAAATG
CTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAGGCACCTCGTTCCT
AGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCTGACGACGTCCCAG
CAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGGCGTCACCTGTATG
ATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACATACTACCCCATCAC
CGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAAGAAAACAAGCTTC
CCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCTTCCCCACCAAGCA
GATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTTTCTTCAACCAAGC
CCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTCGTCATGGGCCCCT
GCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGATGAGACGATCATT
GTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTCCTCTTGTCAAAGC
TGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGTGGGGGTCAGCTTC
ATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGTGGACGATGCGCAT
GCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCAACTATCCAAAAAC
GACCGTTACTCTTAAGAACATCCCCGGTGACGCCATCAGAGAGCCGTTGT
ATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAACCTCCGGCGCCAG
ATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATGGCAGTGAGTTTGC
CGAATTCAAGCGGGACTATGGCACGACACTTGTCACTGGCTTTGCTCGTA
TCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGGTATCCTGTTCTCC
GAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCTGCGCGCAACGTAA
AATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTCATGGTTGGCGCAG
ATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAAGCTCGTTACGGCC
GTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTATTTGGTTCCAGCGC
TGGCGCGGGCAACTATGGAATGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MCCC2KJC3_004871Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004871-T1KJC3_004871-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004871-T1.cdsKJC3_004871-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004871-T1.exon2KJC3_004871-T1.exon2Aspergillus niger KJC3exon
KJC3_004871-T1.exon1KJC3_004871-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR029045
DBxrefInterPro:IPR011763
DBxrefInterPro:IPR011762
DBxrefInterPro:IPR034733
DBxrefPFAM:PF01039
Product mitochondrial
ProductMethylcrotonoyl-CoA carboxylase beta chain
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:954083..955876 -