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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:965808..968326- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004876-T1 ID=KJC3_004876-T1|Name=KJC3_004876-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2519bp|location=Sequence derived from alignment at ch4:965808..968326- (Aspergillus niger KJC3)
GCCGCCTTGCGTCGCCAACCAACAAAAGCACCCCTGTCCGGTGAGTTGGC
TTGACCGGTATGATATTGATCCGACTCGCAGCCTTGTGCTACCCCGCACC
TGAGTATCAGTTCATATCTGGATCTCTAGACTCCCAGGCGGTTGCCATCT
GTGTTGCGTCAAAGTTCAGAACGCCTCAATATCAATAAAATGAGGTTAAC
ATGTGCGTATCTCGTACTGCTGGCGGCGGGGGGTTATAGTGCCGACCTGA
GAGGTAAGTGCTCCCGACAGCTGCCTTCATTTCGTTACTAAGATGGGGAC
ATCCTGCAGAAGCGCTCCCAACAGCCACTCCCGACCAAGACGGACAGGAT
CGTTTCCTAACTCCTCAGAACAACTATAATGGCTGGGTAAATCCTGAAGA
TCTCATGCCTATGCCACAATGCATAGCGCAGCAAGATCAGTCCACCTGGC
TGGAAACTATGACCAAGTGTACCGCCAAACAGTGCACATCTCATTTTGGA
ATTATCTGCACCCATCACCAATGGTTGACTCAGCTCAGCTGTCTCAGCGT
TGCATTCTCCTCAGATGTCACCGCGAGATATCTCCCATACTGCGGTAGAT
CGATACTCGCCAAAGCGCAATTGTACTCATGGATTCGTGACATCACGGGT
AGAGAATGGCTTGTCGAGGTCGGCGATGCGAATGAGCTACAAAACCTTTC
CCCAGCCTCACTTGCCGAGGGGTTCACAGCTGTGGACGTTATCAACACAG
CGCCAAAATGCCTCACCGGCTCGGTATGTTCTCTCTCAACGGAGCCTTTT
CAACACGTTATAGCCTCCTGTGGGTTTACCAGCAGTAGCCAACACACCGG
AAATGCTGCCCGTCCTTGGGAATATAACGAACCCGCTCATTCCATGATCG
CTCTCGATTCAGAAACAGTTGGATATGACCTCATCGGGCATTATGTAAAT
GACAACCGCTATTTTGACAAAGCTTGTTTCTGCAGCGCCTTCGCAGTAGA
TTTCGAAAAGGAGCCCTGTTCAGGTTCAGGACGACTAGACTTCACAAAAG
AGCGCCTCTGGCTCAATGCAACCTGTGGGTCGACTTCCTTACCCGATAAC
TGGGCGGATACACTCATAACCACACAATTCGCATTTATTGCTATCGAGGA
TTGGCGCTGGCCCAAGTGTGTCGCAGATATGCCAAAGCAAGTTACTGGAC
TCACAGATCAGTGTGCAACTGATGCTTGTGAGCTTGACTCAAGCGGATAT
TGCCAAGTCACGCGTGCAGTCGACAGGGAATGCTTTTGCCACAAGATCAG
CTACGATTCCTGCGAGGGTTCATGTCAGATATTCGAAACCCGGATAGACT
ATATTAAGTGGCTTCACGACCTTTGTGGTAATGTCCAAGATTGGCACGGT
TTGCCAGATAACTGGCGTCAGTTATCTGCACCCACTCTTATCGACATGAT
TCCATGGCAATGGGCTCTCAAGCCCTCCAATGCTCCAGACATTCCTATCA
CCCCGCATGGAGACGCTAAAGCAACCGTAGCATGTCCCTCGAACCAGTGG
AAACTTGGAAGCTTTGCTATTGTTAACATAGCTACTTTCTGCGCATTGCT
TCTCTGTCAAAAGAAACACATGCTTCGAAGCAGAAACATCCATTCGGAAC
ACTCGCAGCCGTTGGATTGGGCTTTCAAGGGCATTATCCTCGCCACTGTC
CAGATCTTTGCCAGCTGGCTGAATTTTGTGCTGGTCCAACATACTCCTGG
CTACGAAGAGGTTCCCATATTTCAACTGATTCTTCTCTGGTGTTCAATGC
CTCGTCTTTCTTGGCTGGCCATGTTGTTACTTGGTCTACAACATTTTGGG
CCAAAGAGCCTCTCCGTGGCTGCCTCTTTGTTATTTGCGGAAATACTCCT
TCAGATTCTATCTGCTTATTACTTACTCATAACAATCAATTCTGGCCGAC
AACACAATTTCTATTTCAATATTACGGAAATATGGTTGCCAGCACGGATC
ATGTACGCCGGAGCACTCATGTGGTTGATCATCGTTCTCATAGCATACTA
CACTCTATGGATCCAGGCTAGACGCAGGATGCAAAAGTCCCTTGGATCCG
TTTCCACGCCATTTAACATCACCGAAGAAGGAATGCCGCCAATAATAGAA
TATTTCAACATCCCAACGGAAAAGAGGTCCCACCTGGCGACTGGAAGGCC
AAGGTCCCCGGAAGAAGCACCATTGATGAGGGATCAAAGCAATCGCACAA
TCTATGACCCTCTCCTCGTTAAAGCTCACCACACCCCGCTTCCCCAGAGG
CCAGGTTTTGTGAGGTGGCTTGCCAGAACTAAGAGACCGGCTATTGACCG
CTAGATGTGGGTTAACAAGCTACCAGATGTCGAACCATTGACTTCGTGTG
TCCCATTCGTTTTGATTAATTAATTTCTCCACATACACCTTCTGTGGTGT
TCGTTCAAGGGTCTTCTTTAATTAAATTGATTCTGATGACTAAGATAACG
GAGAATTTAATTTCAAGGT back to topCoding sequence (CDS) from alignment at ch4:965808..968326- >KJC3_004876-T1 ID=KJC3_004876-T1|Name=KJC3_004876-T1|organism=Aspergillus niger KJC3|type=CDS|length=4218bp|location=Sequence derived from alignment at ch4:965808..968326- (Aspergillus niger KJC3)
AAGCGCTCCCAACAGCCACTCCCGACCAAGACGGACAGGATCGTTTCCTA
ACTCCTCAGAACAACTATAATGGCTGGGTAAATCCTGAAGATCTCATGCC
TATGCCACAATGCATAGCGCAGCAAGATCAGTCCACCTGGCTGGAAACTA
TGACCAAGTGTACCGCCAAACAGTGCACATCTCATTTTGGAATTATCTGC
ACCCATCACCAATGGTTGACTCAGCTCAGCTGTCTCAGCGTTGCATTCTC
CTCAGATGTCACCGCGAGATATCTCCCATACTGCGGTAGATCGATACTCG
CCAAAGCGCAATTGTACTCATGGATTCGTGACATCACGGGTAGAGAATGG
CTTGTCGAGGTCGGCGATGCGAATGAGCTACAAAACCTTTCCCCAGCCTC
ACTTGCCGAGGGGTTCACAGCTGTGGACGTTATCAACACAGCGCCAAAAT
GCCTCACCGGCTCGGTATGTTCTCTCTCAACGGAGCCTTTTCAACACGTT
ATAGCCTCCTGTGGGTTTACCAGCAGTAGCCAACACACCGGAAATGCTGC
CCGTCCTTGGGAATATAACGAACCCGCTCATTCCATGATCGCTCTCGATT
CAGAAACAGTTGGATATGACCTCATCGGGCATTATGTAAATGACAACCGC
TATTTTGACAAAGCTTGTTTCTGCAGCGCCTTCGCAGTAGATTTCGAAAA
GGAGCCCTGTTCAGGTTCAGGACGACTAGACTTCACAAAAGAGCGCCTCT
GGCTCAATGCAACCTGTGGGTCGACTTCCTTACCCGATAACTGGGCGGAT
ACACTCATAACCACACAATTCGCATTTATTGCTATCGAGGATTGGCGCTG
GCCCAAGTGTGTCGCAGATATGCCAAAGCAAGTTACTGGACTCACAGATC
AGTGTGCAACTGATGCTTGTGAGCTTGACTCAAGCGGATATTGCCAAGTC
ACGCGTGCAGTCGACAGGGAATGCTTTTGCCACAAGATCAGCTACGATTC
CTGCGAGGGTTCATGTCAGATATTCGAAACCCGGATAGACTATATTAAGT
GGCTTCACGACCTTTGTGGTAATGTCCAAGATTGGCACGGTTTGCCAGAT
AACTGGCGTCAGTTATCTGCACCCACTCTTATCGACATGATTCCATGGCA
ATGGGCTCTCAAGCCCTCCAATGCTCCAGACATTCCTATCACCCCGCATG
GAGACGCTAAAGCAACCGTAGCATGTCCCTCGAACCAGTGGAAACTTGGA
AGCTTTGCTATTGTTAACATAGCTACTTTCTGCGCATTGCTTCTCTGTCA
AAAGAAACACATGCTTCGAAGCAGAAACATCCATTCGGAACACTCGCAGC
CGTTGGATTGGGCTTTCAAGGGCATTATCCTCGCCACTGTCCAGATCTTT
GCCAGCTGGCTGAATTTTGTGCTGGTCCAACATACTCCTGGCTACGAAGA
GGTTCCCATATTTCAACTGATTCTTCTCTGGTGTTCAATGCCTCGTCTTT
CTTGGCTGGCCATGTTGTTACTTGGTCTACAACATTTTGGGCCAAAGAGC
CTCTCCGTGGCTGCCTCTTTGTTATTTGCGGAAATACTCCTTCAGATTCT
ATCTGCTTATTACTTACTCATAACAATCAATTCTGGCCGACAACACAATT
TCTATTTCAATATTACGGAAATATGGTTGCCAGCACGGATCATGTACGCC
GGAGCACTCATGTGGTTGATCATCGTTCTCATAGCATACTACACTCTATG
GATCCAGGCTAGACGCAGGATGCAAAAGTCCCTTGGATCCGTTTCCACGC
CATTTAACATCACCGAAGAAGGAATGCCGCCAATAATAGAATATTTCAAC
ATCCCAACGGAAAAGAGGTCCCACCTGGCGACTGGAAGGCCAAGGTCCCC
GGAAGAAGCACCATTGATGAGGGATCAAAGCAATCGCACAATCTATGACC
CTCTCCTCGTTAAAGCTCACCACACCCCGCTTCCCCAGAGGCCAGGTTTT
GTGAGGTGGCTTGCCAGAACTAAGAGACCGGCTATTGACCGCTAGATGAG
GTTAACATGTGCGTATCTCGTACTGCTGGCGGCGGGGGGTTATAGTGCCG
ACCTGAGAGAAGCGCTCCCAACAGCCACTCCCGACCAAGACGGACAGGAT
CGTTTCCTAACTCCTCAGAACAACTATAATGGCTGGGTAAATCCTGAAGA
TCTCATGCCTATGCCACAATGCATAGCGCAGCAAGATCAGTCCACCTGGC
TGGAAACTATGACCAAGTGTACCGCCAAACAGTGCACATCTCATTTTGGA
ATTATCTGCACCCATCACCAATGGTTGACTCAGCTCAGCTGTCTCAGCGT
TGCATTCTCCTCAGATGTCACCGCGAGATATCTCCCATACTGCGGTAGAT
CGATACTCGCCAAAGCGCAATTGTACTCATGGATTCGTGACATCACGGGT
AGAGAATGGCTTGTCGAGGTCGGCGATGCGAATGAGCTACAAAACCTTTC
CCCAGCCTCACTTGCCGAGGGGTTCACAGCTGTGGACGTTATCAACACAG
CGCCAAAATGCCTCACCGGCTCGGTATGTTCTCTCTCAACGGAGCCTTTT
CAACACGTTATAGCCTCCTGTGGGTTTACCAGCAGTAGCCAACACACCGG
AAATGCTGCCCGTCCTTGGGAATATAACGAACCCGCTCATTCCATGATCG
CTCTCGATTCAGAAACAGTTGGATATGACCTCATCGGGCATTATGTAAAT
GACAACCGCTATTTTGACAAAGCTTGTTTCTGCAGCGCCTTCGCAGTAGA
TTTCGAAAAGGAGCCCTGTTCAGGTTCAGGACGACTAGACTTCACAAAAG
AGCGCCTCTGGCTCAATGCAACCTGTGGGTCGACTTCCTTACCCGATAAC
TGGGCGGATACACTCATAACCACACAATTCGCATTTATTGCTATCGAGGA
TTGGCGCTGGCCCAAGTGTGTCGCAGATATGCCAAAGCAAGTTACTGGAC
TCACAGATCAGTGTGCAACTGATGCTTGTGAGCTTGACTCAAGCGGATAT
TGCCAAGTCACGCGTGCAGTCGACAGGGAATGCTTTTGCCACAAGATCAG
CTACGATTCCTGCGAGGGTTCATGTCAGATATTCGAAACCCGGATAGACT
ATATTAAGTGGCTTCACGACCTTTGTGGTAATGTCCAAGATTGGCACGGT
TTGCCAGATAACTGGCGTCAGTTATCTGCACCCACTCTTATCGACATGAT
TCCATGGCAATGGGCTCTCAAGCCCTCCAATGCTCCAGACATTCCTATCA
CCCCGCATGGAGACGCTAAAGCAACCGTAGCATGTCCCTCGAACCAGTGG
AAACTTGGAAGCTTTGCTATTGTTAACATAGCTACTTTCTGCGCATTGCT
TCTCTGTCAAAAGAAACACATGCTTCGAAGCAGAAACATCCATTCGGAAC
ACTCGCAGCCGTTGGATTGGGCTTTCAAGGGCATTATCCTCGCCACTGTC
CAGATCTTTGCCAGCTGGCTGAATTTTGTGCTGGTCCAACATACTCCTGG
CTACGAAGAGGTTCCCATATTTCAACTGATTCTTCTCTGGTGTTCAATGC
CTCGTCTTTCTTGGCTGGCCATGTTGTTACTTGGTCTACAACATTTTGGG
CCAAAGAGCCTCTCCGTGGCTGCCTCTTTGTTATTTGCGGAAATACTCCT
TCAGATTCTATCTGCTTATTACTTACTCATAACAATCAATTCTGGCCGAC
AACACAATTTCTATTTCAATATTACGGAAATATGGTTGCCAGCACGGATC
ATGTACGCCGGAGCACTCATGTGGTTGATCATCGTTCTCATAGCATACTA
CACTCTATGGATCCAGGCTAGACGCAGGATGCAAAAGTCCCTTGGATCCG
TTTCCACGCCATTTAACATCACCGAAGAAGGAATGCCGCCAATAATAGAA
TATTTCAACATCCCAACGGAAAAGAGGTCCCACCTGGCGACTGGAAGGCC
AAGGTCCCCGGAAGAAGCACCATTGATGAGGGATCAAAGCAATCGCACAA
TCTATGACCCTCTCCTCGTTAAAGCTCACCACACCCCGCTTCCCCAGAGG
CCAGGTTTTGTGAGGTGGCTTGCCAGAACTAAGAGACCGGCTATTGACCG
CTAGATGAGGTTAACATGTGCGTATCTCGTACTGCTGGCGGCGGGGGGTT
ATAGTGCCGACCTGAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004876-T1.utr3p1 | KJC3_004876-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004876-T1.utr5p1 | KJC3_004876-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch4 | supercontig | ch4:965808..968326 - |
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