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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:996439..999372+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004884-T1 ID=KJC3_004884-T1|Name=KJC3_004884-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2934bp|location=Sequence derived from alignment at ch4:996439..999372+ (Aspergillus niger KJC3)
TATGAGGGAGAGAGGATCGGCCCCGTGAAGCCAATCGGGGCCCTCCGATT
GGGAGTTCCTTAGGATGCCGTTGGTCACGGGGGGCGCTAACAGCGGGTGT
CGTGATGTTTGCTGGGAAATCCGACGAAATGAACAGCAGCACTGGTTCCA
TTCGTCTTTGCTGGATGCTGCTGGTGACCATGGTTACGAACAGTGTGATC
CATCTTTCTGTGACGACTCATTTGTGCTTTGGGTCAGTACCACTTCTAGT
CCACTGGACTTGAGGTGCGGGATCCACCCATTTGGGCACTATTGTCATGA
TGGCCTGTGCTGTCTCGGATGGTTTCTTTTGTTCCCATCCACTGGGCAGC
ATCGGCAAGCTCCGGGGTAAGGCAGCAAAACGGACAGGTCAACTTTGACC
TCCCTCTGGGGAATGCAGACCTGCAGGCTGCAGTCAGCGCGGCGCAAGTG
AATGAATGGGGGAGTGGGTTGATGAATGGGGGAAAGAGGGGAGATGATGT
TGCCTGGATGGGGCCTGGCAGGGTCACCTGGACGCGGCCATGTTTTGCCT
CAACGACTATTAAGCCTGCAGGCTGAAGATCTCCGGCGTGTCTTCGCTCC
TGCCCTTGCAGCTGATCTCTCCCCCAGTCCCGCCCACCAACCAACGCCGT
CTTCAAATACAAAAGAATCTCCCCTGACTCGCTTGCTCGCTGGCCTGTCC
TCCCTCTTGTTACCAGCCATTTATCGCGATCGATTACCTCCTGGAGGATT
CCTTTTCCTCCCCCCTGCGTTTGGCGGGAGACCCTGCCCCTCAATTCACC
GCCAGACGCAACACTGACAGCATCTACCGGGCAGTGCTGTTGGTACTGAC
CTCAACATTCTCTCACATGCGAACCTTCAGCCTAGTTGTTCCTTTGATCA
TGTAGCTGAGTTGGGGCTCTTACTTACTTCTGAGCTAGACTGCAGCCTTG
GCATCTCTCACCATGGAAAGTCTCCCCAAAGGCTTGCTGACTACGGCAAC
AAAGGTATCAACAGAGTTGGATGGCGTGGGTCCAGTGCATATTGGGGATG
TCGTGCAGCTTTGGAAAGGTGGGTTTGTCCGCACCTTCCCTTGTCTCGAA
TGTAACGTGTCTCATAGCGCAATAGTATACAGTGCCAATCCATCAGCGCA
TGATGACGACGTGGGATATAGGCTGGAGAACTTCTTCTGGAGAATATGGG
GGAGTCATTGTCTGAACCATACTCTCCTGGGATCTACGTTGGCCAGCCTG
TTCCTACGTATTTCCGAGCCCAACCCGTTTAGTCTGGTGCAGCTGAGCAA
GGTGAGGAATATCGCACGGCTGATGCGCGGCCTACGTTGACATCGATGGC
AACTTGTGCTAACTTGTACAGGCAGCCAAAGCAGCTCAGTCATCCAAGGG
GAATCGTGAAGGGCCCTCGGGGAGGCCGGGCGTTAATAACGGGAAGGCAC
CACTTCACCCCATACTCAAGAAGCCCCGAAACGGAAGTTCCAGCGGAGAA
ACACATAAAACAACTCGTCTGCTCCTGACGGGCATTGATGGTCAGAGTAC
AACTCGCAAACCCTCGAATCCCCCTACGCCGGTTCCTCCACCAGTGCCTA
CAATGGGAGACACTGCGCCCCGACAGACGCAGAAGAAGGCGATTTTTGTG
GCAAGCAAGGCAAAAAGTAGCAAGCGTCGGCCTGTGATAATGCGACGCAA
GTCCTCACAGCAGTCGTCTGGTACCAGTTCAACCCGTGCCCAAAGTCCAC
CACCAGACCCACCGCAGCTGACTCTGGATTATGCCCAAAGCCCACAAATT
CAAGCATCTGGGAGTGCGTCGAAGGCTACCGTTGATGCATATGAACTTAT
TGAAACGATGCCATTGTCGAGAAGCCATGGCGAACCTCGTTCAGACCTTG
CCGTATCCCCAAGAGACACGAAGAACGAGCTTCCCGGTAAAGGCCTCTTT
ATAGAAGACGTACTCGAGAAAGACCCAGCCGAGGAAGAAAGAGCCCAAGT
TGAAAGATCCCCGGAACTACCAGAATTGTTCTTATCCGATCTCAGAGAGC
TTCTTGACACGGAACGACCAGAAGTGGCATATGTTAAGCCGCCACCTCCA
CGTCGAAGAGCATTCTATTCAGTCGAACCTTCCCTACCCGAACCCAATTT
TTTTTCAGCTACTGGATGTCGCCGCTATGATGCACGATATCTGTCGGCGG
AGAACTACGAGCAACCATCCAGCATGAAACTTGTTGACAAGAACTTCCGA
AAGCAATTCTCGGATCGAGTACGCCGGGAACAAGTCCTGGTTTCTTCTCT
AGGTTCACCTGAGCCAGAGACCGAACCCAAGGCAATACTACCCAAACCAG
TACGGGCTGAATCTAGCAGCACGGTCACTAATGACACATCTCCATCCCGG
TTTGGGGATTCACACGGAAAGGCGTCCACGGCTCCAAGCTCTGCCGTTCC
TTTCCAACGGCCTTCAAACTATGAGGATTCGTTTTCAACTGACAGTCAGG
GCAGTACGGAAGAGGAAGTGCCTCCAGTGTTGACCACCTTTACGATGCCA
CGCAGACAAAGTCAGCTTAGTGTGATGATCGAGCAAAGTCGACAGCAGGG
GGTAGAAGAGGGTCAGCAAGAGACGGAAGAGGTTATTGAAGAGATTAGAG
AGTAGTATGATAAAAGAAAAATGAGTGCTGACAACTCATCTGAGTGAGCA
GGACGAAGGTTACAATATGCGATTCACAGCCATTTTCTAAGATCTCAAGA
CATTACTCGTGCGTCGGTGCATGCACTCAGTGCTCAATACAAAATACAAG
ATTTATGCAACAATACTCTTCCATCCATCTCCTTGTCCCATCCATTCCTC
TTCTCATATCCCTCCCTCCCTCATGCCCTTTCCCTTTCCCAAATAATCAC
CCTTCCACCCCAAACAATCAATCCCATCTACGCC back to topCoding sequence (CDS) from alignment at ch4:996439..999372+ >KJC3_004884-T1 ID=KJC3_004884-T1|Name=KJC3_004884-T1|organism=Aspergillus niger KJC3|type=CDS|length=4698bp|location=Sequence derived from alignment at ch4:996439..999372+ (Aspergillus niger KJC3)
ATGGAAAGTCTCCCCAAAGGCTTGCTGACTACGGCAACAAAGGTATCAAC
AGAGTTGGATGGCGTGGGTCCAGTGCATATTGGGGATGTCGTGCAGCTTT
GGAAAGTATACAGTGCCAATCCATCAGCGCATGATGACGACGTGGGATAT
AGGCTGGAGAACTTCTTCTGGAGAATATGGGGGAGTCATTGTCTGAACCA
TACTCTCCTGGGATCTACGTTGGCCAGCCTGTTCCTACGTATTTCCGAGC
CCAACCCGTTTAGTCTGGTGCAGCTGAGCAAGGCAGCCAAAGCAGCTCAG
TCATCCAAGGGGAATCGTGAAGGGCCCTCGGGGAGGCCGGGCGTTAATAA
CGGGAAGGCACCACTTCACCCCATACTCAAGAAGCCCCGAAACGGAAGTT
CCAGCGGAGAAACACATAAAACAACTCGTCTGCTCCTGACGGGCATTGAT
GGTCAGAGTACAACTCGCAAACCCTCGAATCCCCCTACGCCGGTTCCTCC
ACCAGTGCCTACAATGGGAGACACTGCGCCCCGACAGACGCAGAAGAAGG
CGATTTTTGTGGCAAGCAAGGCAAAAAGTAGCAAGCGTCGGCCTGTGATA
ATGCGACGCAAGTCCTCACAGCAGTCGTCTGGTACCAGTTCAACCCGTGC
CCAAAGTCCACCACCAGACCCACCGCAGCTGACTCTGGATTATGCCCAAA
GCCCACAAATTCAAGCATCTGGGAGTGCGTCGAAGGCTACCGTTGATGCA
TATGAACTTATTGAAACGATGCCATTGTCGAGAAGCCATGGCGAACCTCG
TTCAGACCTTGCCGTATCCCCAAGAGACACGAAGAACGAGCTTCCCGGTA
AAGGCCTCTTTATAGAAGACGTACTCGAGAAAGACCCAGCCGAGGAAGAA
AGAGCCCAAGTTGAAAGATCCCCGGAACTACCAGAATTGTTCTTATCCGA
TCTCAGAGAGCTTCTTGACACGGAACGACCAGAAGTGGCATATGTTAAGC
CGCCACCTCCACGTCGAAGAGCATTCTATTCAGTCGAACCTTCCCTACCC
GAACCCAATTTTTTTTCAGCTACTGGATGTCGCCGCTATGATGCACGATA
TCTGTCGGCGGAGAACTACGAGCAACCATCCAGCATGAAACTTGTTGACA
AGAACTTCCGAAAGCAATTCTCGGATCGAGTACGCCGGGAACAAGTCCTG
GTTTCTTCTCTAGGTTCACCTGAGCCAGAGACCGAACCCAAGGCAATACT
ACCCAAACCAGTACGGGCTGAATCTAGCAGCACGGTCACTAATGACACAT
CTCCATCCCGGTTTGGGGATTCACACGGAAAGGCGTCCACGGCTCCAAGC
TCTGCCGTTCCTTTCCAACGGCCTTCAAACTATGAGGATTCGTTTTCAAC
TGACAGTCAGGGCAGTACGGAAGAGGAAGTGCCTCCAGTGTTGACCACCT
TTACGATGCCACGCAGACAAAGTCAGCTTAGTGTGATGATCGAGCAAAGT
CGACAGCAGGGGGTAGAAGAGGGTCAGCAAGAGACGGAAGAGGTTATTGA
AGAGATTAGAGAGTAGATGGAAAGTCTCCCCAAAGGCTTGCTGACTACGG
CAACAAAGGTATCAACAGAGTTGGATGGCGTGGGTCCAGTGCATATTGGG
GATGTCGTGCAGCTTTGGAAAGTATACAGTGCCAATCCATCAGCGCATGA
TGACGACGTGGGATATAGGCTGGAGAACTTCTTCTGGAGAATATGGGGGA
GTCATTGTCTGAACCATACTCTCCTGGGATCTACGTTGGCCAGCCTGTTC
CTACGTATTTCCGAGCCCAACCCGTTTAGTCTGGTGCAGCTGAGCAAGGC
AGCCAAAGCAGCTCAGTCATCCAAGGGGAATCGTGAAGGGCCCTCGGGGA
GGCCGGGCGTTAATAACGGGAAGGCACCACTTCACCCCATACTCAAGAAG
CCCCGAAACGGAAGTTCCAGCGGAGAAACACATAAAACAACTCGTCTGCT
CCTGACGGGCATTGATGGTCAGAGTACAACTCGCAAACCCTCGAATCCCC
CTACGCCGGTTCCTCCACCAGTGCCTACAATGGGAGACACTGCGCCCCGA
CAGACGCAGAAGAAGGCGATTTTTGTGGCAAGCAAGGCAAAAAGTAGCAA
GCGTCGGCCTGTGATAATGCGACGCAAGTCCTCACAGCAGTCGTCTGGTA
CCAGTTCAACCCGTGCCCAAAGTCCACCACCAGACCCACCGCAGCTGACT
CTGGATTATGCCCAAAGCCCACAAATTCAAGCATCTGGGAGTGCGTCGAA
GGCTACCGTTGATGCATATGAACTTATTGAAACGATGCCATTGTCGAGAA
GCCATGGCGAACCTCGTTCAGACCTTGCCGTATCCCCAAGAGACACGAAG
AACGAGCTTCCCGGTAAAGGCCTCTTTATAGAAGACGTACTCGAGAAAGA
CCCAGCCGAGGAAGAAAGAGCCCAAGTTGAAAGATCCCCGGAACTACCAG
AATTGTTCTTATCCGATCTCAGAGAGCTTCTTGACACGGAACGACCAGAA
GTGGCATATGTTAAGCCGCCACCTCCACGTCGAAGAGCATTCTATTCAGT
CGAACCTTCCCTACCCGAACCCAATTTTTTTTCAGCTACTGGATGTCGCC
GCTATGATGCACGATATCTGTCGGCGGAGAACTACGAGCAACCATCCAGC
ATGAAACTTGTTGACAAGAACTTCCGAAAGCAATTCTCGGATCGAGTACG
CCGGGAACAAGTCCTGGTTTCTTCTCTAGGTTCACCTGAGCCAGAGACCG
AACCCAAGGCAATACTACCCAAACCAGTACGGGCTGAATCTAGCAGCACG
GTCACTAATGACACATCTCCATCCCGGTTTGGGGATTCACACGGAAAGGC
GTCCACGGCTCCAAGCTCTGCCGTTCCTTTCCAACGGCCTTCAAACTATG
AGGATTCGTTTTCAACTGACAGTCAGGGCAGTACGGAAGAGGAAGTGCCT
CCAGTGTTGACCACCTTTACGATGCCACGCAGACAAAGTCAGCTTAGTGT
GATGATCGAGCAAAGTCGACAGCAGGGGGTAGAAGAGGGTCAGCAAGAGA
CGGAAGAGGTTATTGAAGAGATTAGAGAGTAGATGGAAAGTCTCCCCAAA
GGCTTGCTGACTACGGCAACAAAGGTATCAACAGAGTTGGATGGCGTGGG
TCCAGTGCATATTGGGGATGTCGTGCAGCTTTGGAAAGTATACAGTGCCA
ATCCATCAGCGCATGATGACGACGTGGGATATAGGCTGGAGAACTTCTTC
TGGAGAATATGGGGGAGTCATTGTCTGAACCATACTCTCCTGGGATCTAC
GTTGGCCAGCCTGTTCCTACGTATTTCCGAGCCCAACCCGTTTAGTCTGG
TGCAGCTGAGCAAGGCAGCCAAAGCAGCTCAGTCATCCAAGGGGAATCGT
GAAGGGCCCTCGGGGAGGCCGGGCGTTAATAACGGGAAGGCACCACTTCA
CCCCATACTCAAGAAGCCCCGAAACGGAAGTTCCAGCGGAGAAACACATA
AAACAACTCGTCTGCTCCTGACGGGCATTGATGGTCAGAGTACAACTCGC
AAACCCTCGAATCCCCCTACGCCGGTTCCTCCACCAGTGCCTACAATGGG
AGACACTGCGCCCCGACAGACGCAGAAGAAGGCGATTTTTGTGGCAAGCA
AGGCAAAAAGTAGCAAGCGTCGGCCTGTGATAATGCGACGCAAGTCCTCA
CAGCAGTCGTCTGGTACCAGTTCAACCCGTGCCCAAAGTCCACCACCAGA
CCCACCGCAGCTGACTCTGGATTATGCCCAAAGCCCACAAATTCAAGCAT
CTGGGAGTGCGTCGAAGGCTACCGTTGATGCATATGAACTTATTGAAACG
ATGCCATTGTCGAGAAGCCATGGCGAACCTCGTTCAGACCTTGCCGTATC
CCCAAGAGACACGAAGAACGAGCTTCCCGGTAAAGGCCTCTTTATAGAAG
ACGTACTCGAGAAAGACCCAGCCGAGGAAGAAAGAGCCCAAGTTGAAAGA
TCCCCGGAACTACCAGAATTGTTCTTATCCGATCTCAGAGAGCTTCTTGA
CACGGAACGACCAGAAGTGGCATATGTTAAGCCGCCACCTCCACGTCGAA
GAGCATTCTATTCAGTCGAACCTTCCCTACCCGAACCCAATTTTTTTTCA
GCTACTGGATGTCGCCGCTATGATGCACGATATCTGTCGGCGGAGAACTA
CGAGCAACCATCCAGCATGAAACTTGTTGACAAGAACTTCCGAAAGCAAT
TCTCGGATCGAGTACGCCGGGAACAAGTCCTGGTTTCTTCTCTAGGTTCA
CCTGAGCCAGAGACCGAACCCAAGGCAATACTACCCAAACCAGTACGGGC
TGAATCTAGCAGCACGGTCACTAATGACACATCTCCATCCCGGTTTGGGG
ATTCACACGGAAAGGCGTCCACGGCTCCAAGCTCTGCCGTTCCTTTCCAA
CGGCCTTCAAACTATGAGGATTCGTTTTCAACTGACAGTCAGGGCAGTAC
GGAAGAGGAAGTGCCTCCAGTGTTGACCACCTTTACGATGCCACGCAGAC
AAAGTCAGCTTAGTGTGATGATCGAGCAAAGTCGACAGCAGGGGGTAGAA
GAGGGTCAGCAAGAGACGGAAGAGGTTATTGAAGAGATTAGAGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004884-T1.utr3p1 | KJC3_004884-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013860 |
| DBxref | PFAM:PF08550 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:996439..999372 + |
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