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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1000760..1003897- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004886-T1 ID=KJC3_004886-T1|Name=KJC3_004886-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3138bp|location=Sequence derived from alignment at ch4:1000760..1003897- (Aspergillus niger KJC3)
CTCCGCCATCTTCGTCCCCTGTTGCCTTCCCCTCTTCTGATTGCTAGTTT
ACTTGTTTAATTCCCCGGGATCTGCTATCACTGCCTGTTTATCTTTACAC
CCGTTCTTGCCCTTCCCCCCTGTCCCTCTTTTGCGTGGTCCGGGGTTGAA
CTGGTGTCGATTCTCGGTCCTTCCTTGCCGACACCTCGGGTTGAGTCGTC
AAAAAGTCTGCATGGGCGATATCGGTGCATGGTCTCCTACGTAAGTCCCT
TGCTCTGTCCTGGGGATCCTACAAGTCCAACTTTGGATGTTGAGACTGGC
GGGGACCTTGGATGCCCTCGTGGGCGGTCTCCTCCAAACTCTGTGTGGTT
CCGGGTGCCAGCGTTGGGAAACATGACAACTGACTTGTGGGTGCCAATCC
AGTGCGGTCAAGGGTCATCTCCGTATTGCTCCCTCCACCCCCTCCCTCTT
CCTTCCGTATTCACGCCGACCAGACGGAACTGGCTATAGAGTATCGTGTG
GGGGAAAGGTTGGCCATCGAGGACTTATAACAAAATTAATTGGAGGGAAG
GGTTGTCTTTAAATCAAAGCAAAAGGGACCATCCAGGGAACGTTGCCGGG
TTGGGCTACAAGGAGGCAAACTGCCATTCGGCTGTGGTTGTGGAGGTCGA
GAGAGAGAGCCGAGAAACTGCCATCATGACTGCTACTCTGAGTATGTCTT
TTACCAAGGATGTCTGTTCCTCCGGGGAAGTAGCGTCTGGCCTTGTCGGT
GCGTACAATTGACGGGTTGTCCCTCGATGGTGGATCCGCAAATTCCTGGG
CGGATCTAGAGTTCAGGGTTCTGCTGGCTGCTCAGTTGCTGATACTGCTC
ACCTGCAGATGGGATGTTTAATTCGGCCCCAGATACACCGTCCCCTGTCT
ACCCGGATAGGCTCATCCGCCCTCTGCCCAAGCGTACCCTCCGCTCTCGC
CTGTCCTCTGAAGCGGCCGAGTCGATCCTCTTCCCACCGGCCCCTCCTGC
CACCCAGCTGTTCTACGGAACCTCCGTGGACAGCGCAGACATTGTAAATG
ACACCAAAGTGTATGTGCAACAGAGCGACGGTCGCGACCAAAGCCCTGAT
GGGGTGGAGTTGGAGAGCGGTGATGAGGACGGGCCCGTAGTTGTGCGTCG
AAGTGCTGGTTTCCGCGGGTCGTCATTGTCCCCCTCCGCCGCCTCCAGTG
CCCCCCCTCAGACGCTGCCCAGCAACAGTGAAGGGCCTCAAGTGAAGTCC
TCTTCGGCGGGTCCCGATGGGTACGATGCGTTTGAGAACACCAACAACAA
GAAGAAACGCAAAATTCCTACACCAGGCAACCTCAGCAGTCACCACTCTA
CCCTCTCTCCAGAGTTCTCCAGCATGGGCCTTGCGACGTCTTTTCAGTCC
CCTTCCACTGCTGGCGAAGGCAGCCATGTGAGTACCTTCTATGGCACGGG
CAGCCCCGCGTCTCCGATCTCCAGCGGCATGTCCGGCGCGGGACGAGGTC
GCCTTGGCCGCCATCCGCAGCGTGGTAGCACGGGGAGGAACTCCTTGTCG
CTTCATTCTCCCATCAGTTGGCCTCGCACCCCTACGCGGCGCGATGGCCT
GTTGTCGTCCCCGGGAGGAGCAGGTATGTTTCTCTTGTGTGTCTTACCGA
GTGTTCGGGCTTCGCTTACGCACGTCTAGGTGACTCGGTTCCGAAACCAG
ACCAGGGTATAATTTCCGCCGCTATCGCAAATGCCGCTGCTTCAGCATTC
TCCTCACCCCCTCCTGGACCCGGCCATGTCAGCATGCTCGAACGACAAAC
GCCTACGCCGACCAAGACCCAGTTCACATTCACATGCGAGTCGGATTCAT
CGAAGGGAATGGCCCTGCAGGCACAGAACGCGTACCCTGTTCCTCACCGT
TCACCCAGTGCTCTCACTGCGGCTGTCCAGAGCCAGCGGGGATACTCACA
AGGCACCCAGACAATCCCAAACGCTTCCTCACAAGTCAACTCTTCAGGGC
CATCTCAACAGTCACAGCACTCGCAACAGCCGCAACTACAAATTGCGGGA
ACTGAGCCTGCGCCCACGGGTAGGAAGAAGAAGCGGTCTCCGGGTAGCAT
CTATGCTCTGGCCGCGCGTCAACGCAAAATCCAGCAGCAGTATGCCAACC
TTCACCACCCGCCCAGCCTCGAGGACATCTGGATCTGCGAGTTCTGCGAG
TACGAGAGCATCTTTGGGCACCCGCCCGAGGCTCTCATTCGCCAATACGA
GATCAAGGATCGCAAGGAGCGGAAACGATTGGCGGAGAAGAAGCGATTGC
TCGAGAAGGCCAAGATGAAGGGTCGTAAGGGCAAGAAAGCGACCAAGAAC
GCCAGCAAGCACGCAGCGGCTCAGCACGCAGCCTATGACCAGGGATACGA
CCGGGCGTCCGTGGATCATTCTTCAAGCGGAGGACCAGGGGTGCATGATG
ACGAGTATTTAGGCAATGAGTACGAGGACGAGGGAATTCCAACCCCACCT
CCAGCGCCTCCAACTTCCGTCAAAACTGCACCGCCGCCAGGGCATCCGCC
TAAATTAGCTGCTGCAACAGGGTCGGGCGCTAAGAGTGCAACGGACGGCG
GCACAAGGCCGCCCTGACAATGGAGCAACGGCTATCGGGCTAGCGAGCGG
TGATAGGCCGTTGCTCACTCTTCCTTTCGGTTTTCCCTTCTTTGTCTGTT
CCTGTTTTAACGCATGTTTTCTTCTATCTTCAACCATTAATCTTTTCTTT
CTATTTCCCTTCCACTGCATGGTTGAGTGTTAGCCTTCTGCTTTTCGTTT
TTCCCATCACTTGCATGAATGAATCCCCGCTCCGGTCGATGAATGTCACG
TCAGCGTCGCACATGAATATTTCAGGTTCAGGTTGGAATTGTTGAGCAGC
ATCAATGCATATTGGAGAATGTCATTGGAGCACGGATAGAGAGAGAGAGA
GAGAGAGACCGATGGACGGACGGATGAGAATCAGGGGGGTTTCGATGTCT
CGGTATTATGCATGCAGAGAGAACATGGATGGATGGTTGGGCGATAGTAT
CTTAGTCCGTAGCGCTAATGTATGTAGATCAGATCCTATGGCGAGAGACG
CAGGAGAGAAAGAAAGGAATCCATGTTCTGGTCTGTTG back to topCoding sequence (CDS) from alignment at ch4:1000760..1003897- >KJC3_004886-T1 ID=KJC3_004886-T1|Name=KJC3_004886-T1|organism=Aspergillus niger KJC3|type=CDS|length=5328bp|location=Sequence derived from alignment at ch4:1000760..1003897- (Aspergillus niger KJC3)
GTGACTCGGTTCCGAAACCAGACCAGGGTATAATTTCCGCCGCTATCGCA
AATGCCGCTGCTTCAGCATTCTCCTCACCCCCTCCTGGACCCGGCCATGT
CAGCATGCTCGAACGACAAACGCCTACGCCGACCAAGACCCAGTTCACAT
TCACATGCGAGTCGGATTCATCGAAGGGAATGGCCCTGCAGGCACAGAAC
GCGTACCCTGTTCCTCACCGTTCACCCAGTGCTCTCACTGCGGCTGTCCA
GAGCCAGCGGGGATACTCACAAGGCACCCAGACAATCCCAAACGCTTCCT
CACAAGTCAACTCTTCAGGGCCATCTCAACAGTCACAGCACTCGCAACAG
CCGCAACTACAAATTGCGGGAACTGAGCCTGCGCCCACGGGTAGGAAGAA
GAAGCGGTCTCCGGGTAGCATCTATGCTCTGGCCGCGCGTCAACGCAAAA
TCCAGCAGCAGTATGCCAACCTTCACCACCCGCCCAGCCTCGAGGACATC
TGGATCTGCGAGTTCTGCGAGTACGAGAGCATCTTTGGGCACCCGCCCGA
GGCTCTCATTCGCCAATACGAGATCAAGGATCGCAAGGAGCGGAAACGAT
TGGCGGAGAAGAAGCGATTGCTCGAGAAGGCCAAGATGAAGGGTCGTAAG
GGCAAGAAAGCGACCAAGAACGCCAGCAAGCACGCAGCGGCTCAGCACGC
AGCCTATGACCAGGGATACGACCGGGCGTCCGTGGATCATTCTTCAAGCG
GAGGACCAGGGGTGCATGATGACGAGTATTTAGGCAATGAGTACGAGGAC
GAGGGAATTCCAACCCCACCTCCAGCGCCTCCAACTTCCGTCAAAACTGC
ACCGCCGCCAGGGCATCCGCCTAAATTAGCTGCTGCAACAGGGTCGGGCG
CTAAGAGTGCAACGGACGGCGGCACAAGGCCGCCCTGAATGGGATGTTTA
ATTCGGCCCCAGATACACCGTCCCCTGTCTACCCGGATAGGCTCATCCGC
CCTCTGCCCAAGCGTACCCTCCGCTCTCGCCTGTCCTCTGAAGCGGCCGA
GTCGATCCTCTTCCCACCGGCCCCTCCTGCCACCCAGCTGTTCTACGGAA
CCTCCGTGGACAGCGCAGACATTGTAAATGACACCAAAGTGTATGTGCAA
CAGAGCGACGGTCGCGACCAAAGCCCTGATGGGGTGGAGTTGGAGAGCGG
TGATGAGGACGGGCCCGTAGTTGTGCGTCGAAGTGCTGGTTTCCGCGGGT
CGTCATTGTCCCCCTCCGCCGCCTCCAGTGCCCCCCCTCAGACGCTGCCC
AGCAACAGTGAAGGGCCTCAAGTGAAGTCCTCTTCGGCGGGTCCCGATGG
GTACGATGCGTTTGAGAACACCAACAACAAGAAGAAACGCAAAATTCCTA
CACCAGGCAACCTCAGCAGTCACCACTCTACCCTCTCTCCAGAGTTCTCC
AGCATGGGCCTTGCGACGTCTTTTCAGTCCCCTTCCACTGCTGGCGAAGG
CAGCCATGTGAGTACCTTCTATGGCACGGGCAGCCCCGCGTCTCCGATCT
CCAGCGGCATGTCCGGCGCGGGACGAGGTCGCCTTGGCCGCCATCCGCAG
CGTGGTAGCACGGGGAGGAACTCCTTGTCGCTTCATTCTCCCATCAGTTG
GCCTCGCACCCCTACGCGGCGCGATGGCCTGTTGTCGTCCCCGGGAGGAG
CAGATGACTGCTACTCTGAGTATGTCTTTTACCAAGGATGTCTGTTCCTC
CGGGGAAGTAGCGTCTGGCCTTGTCGGTGACTCGGTTCCGAAACCAGACC
AGGGTATAATTTCCGCCGCTATCGCAAATGCCGCTGCTTCAGCATTCTCC
TCACCCCCTCCTGGACCCGGCCATGTCAGCATGCTCGAACGACAAACGCC
TACGCCGACCAAGACCCAGTTCACATTCACATGCGAGTCGGATTCATCGA
AGGGAATGGCCCTGCAGGCACAGAACGCGTACCCTGTTCCTCACCGTTCA
CCCAGTGCTCTCACTGCGGCTGTCCAGAGCCAGCGGGGATACTCACAAGG
CACCCAGACAATCCCAAACGCTTCCTCACAAGTCAACTCTTCAGGGCCAT
CTCAACAGTCACAGCACTCGCAACAGCCGCAACTACAAATTGCGGGAACT
GAGCCTGCGCCCACGGGTAGGAAGAAGAAGCGGTCTCCGGGTAGCATCTA
TGCTCTGGCCGCGCGTCAACGCAAAATCCAGCAGCAGTATGCCAACCTTC
ACCACCCGCCCAGCCTCGAGGACATCTGGATCTGCGAGTTCTGCGAGTAC
GAGAGCATCTTTGGGCACCCGCCCGAGGCTCTCATTCGCCAATACGAGAT
CAAGGATCGCAAGGAGCGGAAACGATTGGCGGAGAAGAAGCGATTGCTCG
AGAAGGCCAAGATGAAGGGTCGTAAGGGCAAGAAAGCGACCAAGAACGCC
AGCAAGCACGCAGCGGCTCAGCACGCAGCCTATGACCAGGGATACGACCG
GGCGTCCGTGGATCATTCTTCAAGCGGAGGACCAGGGGTGCATGATGACG
AGTATTTAGGCAATGAGTACGAGGACGAGGGAATTCCAACCCCACCTCCA
GCGCCTCCAACTTCCGTCAAAACTGCACCGCCGCCAGGGCATCCGCCTAA
ATTAGCTGCTGCAACAGGGTCGGGCGCTAAGAGTGCAACGGACGGCGGCA
CAAGGCCGCCCTGAATGGGATGTTTAATTCGGCCCCAGATACACCGTCCC
CTGTCTACCCGGATAGGCTCATCCGCCCTCTGCCCAAGCGTACCCTCCGC
TCTCGCCTGTCCTCTGAAGCGGCCGAGTCGATCCTCTTCCCACCGGCCCC
TCCTGCCACCCAGCTGTTCTACGGAACCTCCGTGGACAGCGCAGACATTG
TAAATGACACCAAAGTGTATGTGCAACAGAGCGACGGTCGCGACCAAAGC
CCTGATGGGGTGGAGTTGGAGAGCGGTGATGAGGACGGGCCCGTAGTTGT
GCGTCGAAGTGCTGGTTTCCGCGGGTCGTCATTGTCCCCCTCCGCCGCCT
CCAGTGCCCCCCCTCAGACGCTGCCCAGCAACAGTGAAGGGCCTCAAGTG
AAGTCCTCTTCGGCGGGTCCCGATGGGTACGATGCGTTTGAGAACACCAA
CAACAAGAAGAAACGCAAAATTCCTACACCAGGCAACCTCAGCAGTCACC
ACTCTACCCTCTCTCCAGAGTTCTCCAGCATGGGCCTTGCGACGTCTTTT
CAGTCCCCTTCCACTGCTGGCGAAGGCAGCCATGTGAGTACCTTCTATGG
CACGGGCAGCCCCGCGTCTCCGATCTCCAGCGGCATGTCCGGCGCGGGAC
GAGGTCGCCTTGGCCGCCATCCGCAGCGTGGTAGCACGGGGAGGAACTCC
TTGTCGCTTCATTCTCCCATCAGTTGGCCTCGCACCCCTACGCGGCGCGA
TGGCCTGTTGTCGTCCCCGGGAGGAGCAGATGACTGCTACTCTGAGTATG
TCTTTTACCAAGGATGTCTGTTCCTCCGGGGAAGTAGCGTCTGGCCTTGT
CGGTGACTCGGTTCCGAAACCAGACCAGGGTATAATTTCCGCCGCTATCG
CAAATGCCGCTGCTTCAGCATTCTCCTCACCCCCTCCTGGACCCGGCCAT
GTCAGCATGCTCGAACGACAAACGCCTACGCCGACCAAGACCCAGTTCAC
ATTCACATGCGAGTCGGATTCATCGAAGGGAATGGCCCTGCAGGCACAGA
ACGCGTACCCTGTTCCTCACCGTTCACCCAGTGCTCTCACTGCGGCTGTC
CAGAGCCAGCGGGGATACTCACAAGGCACCCAGACAATCCCAAACGCTTC
CTCACAAGTCAACTCTTCAGGGCCATCTCAACAGTCACAGCACTCGCAAC
AGCCGCAACTACAAATTGCGGGAACTGAGCCTGCGCCCACGGGTAGGAAG
AAGAAGCGGTCTCCGGGTAGCATCTATGCTCTGGCCGCGCGTCAACGCAA
AATCCAGCAGCAGTATGCCAACCTTCACCACCCGCCCAGCCTCGAGGACA
TCTGGATCTGCGAGTTCTGCGAGTACGAGAGCATCTTTGGGCACCCGCCC
GAGGCTCTCATTCGCCAATACGAGATCAAGGATCGCAAGGAGCGGAAACG
ATTGGCGGAGAAGAAGCGATTGCTCGAGAAGGCCAAGATGAAGGGTCGTA
AGGGCAAGAAAGCGACCAAGAACGCCAGCAAGCACGCAGCGGCTCAGCAC
GCAGCCTATGACCAGGGATACGACCGGGCGTCCGTGGATCATTCTTCAAG
CGGAGGACCAGGGGTGCATGATGACGAGTATTTAGGCAATGAGTACGAGG
ACGAGGGAATTCCAACCCCACCTCCAGCGCCTCCAACTTCCGTCAAAACT
GCACCGCCGCCAGGGCATCCGCCTAAATTAGCTGCTGCAACAGGGTCGGG
CGCTAAGAGTGCAACGGACGGCGGCACAAGGCCGCCCTGAATGGGATGTT
TAATTCGGCCCCAGATACACCGTCCCCTGTCTACCCGGATAGGCTCATCC
GCCCTCTGCCCAAGCGTACCCTCCGCTCTCGCCTGTCCTCTGAAGCGGCC
GAGTCGATCCTCTTCCCACCGGCCCCTCCTGCCACCCAGCTGTTCTACGG
AACCTCCGTGGACAGCGCAGACATTGTAAATGACACCAAAGTGTATGTGC
AACAGAGCGACGGTCGCGACCAAAGCCCTGATGGGGTGGAGTTGGAGAGC
GGTGATGAGGACGGGCCCGTAGTTGTGCGTCGAAGTGCTGGTTTCCGCGG
GTCGTCATTGTCCCCCTCCGCCGCCTCCAGTGCCCCCCCTCAGACGCTGC
CCAGCAACAGTGAAGGGCCTCAAGTGAAGTCCTCTTCGGCGGGTCCCGAT
GGGTACGATGCGTTTGAGAACACCAACAACAAGAAGAAACGCAAAATTCC
TACACCAGGCAACCTCAGCAGTCACCACTCTACCCTCTCTCCAGAGTTCT
CCAGCATGGGCCTTGCGACGTCTTTTCAGTCCCCTTCCACTGCTGGCGAA
GGCAGCCATGTGAGTACCTTCTATGGCACGGGCAGCCCCGCGTCTCCGAT
CTCCAGCGGCATGTCCGGCGCGGGACGAGGTCGCCTTGGCCGCCATCCGC
AGCGTGGTAGCACGGGGAGGAACTCCTTGTCGCTTCATTCTCCCATCAGT
TGGCCTCGCACCCCTACGCGGCGCGATGGCCTGTTGTCGTCCCCGGGAGG
AGCAGATGACTGCTACTCTGAGTATGTCTTTTACCAAGGATGTCTGTTCC
TCCGGGGAAGTAGCGTCTGGCCTTGTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004886-T1.utr3p1 | KJC3_004886-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch4 | supercontig | ch4:1000760..1003897 - |
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