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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1005234..1008163+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004887-T1 ID=KJC3_004887-T1|Name=KJC3_004887-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2930bp|location=Sequence derived from alignment at ch4:1005234..1008163+ (Aspergillus niger KJC3)
GTTTCCCTCTTTCTCGCTCCTCCTCGTCCTTTTTCTCCTCCCCACCAACC
CTTTTCCTGCAATTTCACAGACTATGTAGTCCTCGGTCTTCGTTCAAGCT
CGCAGGCGCAGTTCTCGGATGTCTTTTCTCCTTTGGTCACAATTGGCATT
CCTCTGTCCTTGACTTGCCGGCTTTTTCCCCTCTGCTGCATCTCTTGTCA
TCCTTAACCACTTGTCTGAGGCGTTGTCGACTCCCCCAGCTCTCCACCCG
TGTGCGACAGCTCGCTCACGGGCAGGTGCCTACTCCTCGACGTTGTCCTC
TCTCTTTTCGATCCATATTCTATTCTTCCTCCTGTCCCTTCATACCCTAC
GACCGTTTTATTGTCAGAGTTCGGTCGCTCTGCCCATCTCCCCCGCTAAT
AACCTCCCTCCATTATGACGCCTCGTCGCTCCTCTCGTGCTCGCAACCAA
CCCTCTCCAGCTATTCTTCAGCATACAAACTCCTCTAGCTCCTCCAATTC
CATGGCTCGCGAAAGAAGCACCCGGTCGAATCACAAAATCTCCTCCCCTC
AGCGGTCCTCCACCAATCGGTCCCAGTCGATCGACGATGCCGACACAGGC
TCGAAAAGTGACTTTCGAGAAACACGCCAGCGACAGCGTGCTCGGGGGGA
GGAGGATAATGATCACCATATGAGACTTGAGGATGGTGATGACGATGACG
GAGAAGAAGATGACGAGGAGGAAGAAATTACCCGGTGTCTCTGTGGACAA
CAGGAGTACCCGGGTCTGCCTCCTTCTCGACGTGATTTAAGTCGGCGCAA
TGGTTTGCGAGCCGGCATGAAAGATGAGACATTCAATCTCGCCGCGGACG
CATCAGACCTGTTGCCAGACGAGATCGGGAGCATGTTCATCCAATGTGAT
TCGTGCAAAGTCTGGCAGCATGGTGGCTGTGTGGGGATCATGGACGAGGC
TATGAGCCCCGATGAGTACTTTTGCGAAGAGTGTCGCAAGGACCTCCATA
AAATCATCAGCGAAACAAATGGGTAAGCCGATGTCTTCCTTTTTTCGTTC
TCGTCGGTTTTTGTACTGCGTCTCGGTTCTTGTTGCCAGACTCAAATTTT
CGAGCGAGCCGCTTGTGCTGTTTTCTCATCCGATTATTCGCTATTTCTCG
GCATGTGGCATTTTCGCTTACGATCTCGCAGATCATATTCGTCCCAATAT
CTTCCTGTCGCTCCTCCCCCTTCCACTGCTCCATCGTCACGAGAGTCGTC
GCGGGAAACATCGAGACGCGCCAAGGAACCAAAACCACGACACAATGATC
CTACCAATCCTAAGAGGCGATCAACGATGAATAGCCGTGATGCGGCTTAT
GACGAAGAAGAGCAGCTGCGACGGGCCATCGAAGAGAGCAAGGAAGATAA
CAAACCAGCTGGTGATGATATTGCGGCCCGGAGGCCCAAGAGAAGTCGCA
GTGACAGTGAAGCGTACGTTGACCGTTGTTCATTGTGCTGGTGATCAAGC
TAACAGGACGGTAGGCAAAAACAAACGACTAAGCGACAGCGCACGAGCTC
TCCCTCTCCGGGCGCCGTTTCGAAAAGTAACCCTGCATCTCAGCCGGTCT
CGGAGGATGAGTCGAAGAAACCTGCCACCAATGGCGTCCGACGGCAGAGA
GCTGCTTCACGCAGCCAGCGTGATAAGGAAACCAAAGAACCCGAAGAACC
TGAGACGGAGCAGCCAGAGGTTGCAACTCGTCGGAAAAGCCGATCGGAGC
GACAGAAGGGTGATGGTGAGTGATACCGCTTCCTGTCAATATCCCGATCA
TGAGGCTAACTTTTGAAGACGCTGAGTCCGACCTTGAGACAGGATCCCCA
ATCAAGCCTAATGCGAGCGAACCCGAGCCGAAGCAACCCAGTCCGGAGGA
GACGCCTGCCCCTGCCCCCGAAGCTGCACCTTCGCGTCCGTCCACTCGCA
AATCCGGCCGTCCGCCTGCACGGCGTGGCGGTCGCATCGGACGGAATCAA
TATACTCGCGATCGTGACACCAACGGCACCGACTCAACAACACGGTCGCC
GCGGCGTGGACAATCGCATGACCTTGGAGGGGATTCGCCGCGTGTGGGTG
TCAACGGGACACACATCAACAGCAGTGAATCGGGCAAGCCCAGCCGGCCC
CGCTACGTGAACCAACGAACCACCATGAACGAGATGAAGCGACGGGTGAC
GGCGATCTTGGAGTTCATTTCACGCATGCAGGTGGAGATGGCTGTAGCAG
GGGAGAGCACCACCCCGCCGGGTAACGATGACCGGCCGAACGGGGTCAGC
CGACTTCTGAGCGAGAGTCAACTCCTCTCCAGTGCTATAGAGAGCGCTGG
CCTGGAGGGCGGTTCAGTGGCGCAACCCGCCGCAGAGAAGGATTTCAAGG
ACCTCAGCAGCGTGGAGATGATGGATGTGTTGACTCGTCATCTCTTGAAG
TGGCAGCAGGAGTATGGCAAATTTGGGGAACGGTGACGGAGCTACCGGCA
GATCCGTTTCTTCTTTGGCAACTGCTGGCTAGGAGTTTTTGCTACGCACG
ATACCCGGTTCGTCTCTTCTGAAAGTGTGGACATGTATATTATGGCTTCT
GGAGCATCTTGAGGACAGTCGGCGTTACGAATCTTACGGAATAAGTACCC
TGCTCATCTAGTACGATTTGCTTGGTTGTTGAGGCGTGAATTGGATATGT
TTGATGTCGGTATATTGGAGTTCTGGCGTATGCCATATGCCAGCTGATCA
CGGCCTGGCTTCGCTCAACTAGATTACTTTGTTATGGTTCTGGCATATGG
CTTCATTTTCTCACAGTACGAGGGTTAATGTTTGATTGCTGTGGATAGTA
TAATACCATTCTTTCTGATGCTTTCATCTGGATATATGCTTTCCCTCTGT
TAGCAACATACTACATCTTTATCATCTGGC back to topCoding sequence (CDS) from alignment at ch4:1005234..1008163+ >KJC3_004887-T1 ID=KJC3_004887-T1|Name=KJC3_004887-T1|organism=Aspergillus niger KJC3|type=CDS|length=7236bp|location=Sequence derived from alignment at ch4:1005234..1008163+ (Aspergillus niger KJC3)
ATGACGCCTCGTCGCTCCTCTCGTGCTCGCAACCAACCCTCTCCAGCTAT
TCTTCAGCATACAAACTCCTCTAGCTCCTCCAATTCCATGGCTCGCGAAA
GAAGCACCCGGTCGAATCACAAAATCTCCTCCCCTCAGCGGTCCTCCACC
AATCGGTCCCAGTCGATCGACGATGCCGACACAGGCTCGAAAAGTGACTT
TCGAGAAACACGCCAGCGACAGCGTGCTCGGGGGGAGGAGGATAATGATC
ACCATATGAGACTTGAGGATGGTGATGACGATGACGGAGAAGAAGATGAC
GAGGAGGAAGAAATTACCCGGTGTCTCTGTGGACAACAGGAGTACCCGGG
TCTGCCTCCTTCTCGACGTGATTTAAGTCGGCGCAATGGTTTGCGAGCCG
GCATGAAAGATGAGACATTCAATCTCGCCGCGGACGCATCAGACCTGTTG
CCAGACGAGATCGGGAGCATGTTCATCCAATGTGATTCGTGCAAAGTCTG
GCAGCATGGTGGCTGTGTGGGGATCATGGACGAGGCTATGAGCCCCGATG
AGTACTTTTGCGAAGAGTGTCGCAAGGACCTCCATAAAATCATCAGCGAA
ACAAATGGATCATATTCGTCCCAATATCTTCCTGTCGCTCCTCCCCCTTC
CACTGCTCCATCGTCACGAGAGTCGTCGCGGGAAACATCGAGACGCGCCA
AGGAACCAAAACCACGACACAATGATCCTACCAATCCTAAGAGGCGATCA
ACGATGAATAGCCGTGATGCGGCTTATGACGAAGAAGAGCAGCTGCGACG
GGCCATCGAAGAGAGCAAGGAAGATAACAAACCAGCTGGTGATGATATTG
CGGCCCGGAGGCCCAAGAGAAGTCGCAGTGACAGTGAAGCGCAAAAACAA
ACGACTAAGCGACAGCGCACGAGCTCTCCCTCTCCGGGCGCCGTTTCGAA
AAGTAACCCTGCATCTCAGCCGGTCTCGGAGGATGAGTCGAAGAAACCTG
CCACCAATGGCGTCCGACGGCAGAGAGCTGCTTCACGCAGCCAGCGTGAT
AAGGAAACCAAAGAACCCGAAGAACCTGAGACGGAGCAGCCAGAGGTTGC
AACTCGTCGGAAAAGCCGATCGGAGCGACAGAAGGGTGATGACGCTGAGT
CCGACCTTGAGACAGGATCCCCAATCAAGCCTAATGCGAGCGAACCCGAG
CCGAAGCAACCCAGTCCGGAGGAGACGCCTGCCCCTGCCCCCGAAGCTGC
ACCTTCGCGTCCGTCCACTCGCAAATCCGGCCGTCCGCCTGCACGGCGTG
GCGGTCGCATCGGACGGAATCAATATACTCGCGATCGTGACACCAACGGC
ACCGACTCAACAACACGGTCGCCGCGGCGTGGACAATCGCATGACCTTGG
AGGGGATTCGCCGCGTGTGGGTGTCAACGGGACACACATCAACAGCAGTG
AATCGGGCAAGCCCAGCCGGCCCCGCTACGTGAACCAACGAACCACCATG
AACGAGATGAAGCGACGGGTGACGGCGATCTTGGAGTTCATTTCACGCAT
GCAGGTGGAGATGGCTGTAGCAGGGGAGAGCACCACCCCGCCGGGTAACG
ATGACCGGCCGAACGGGGTCAGCCGACTTCTGAGCGAGAGTCAACTCCTC
TCCAGTGCTATAGAGAGCGCTGGCCTGGAGGGCGGTTCAGTGGCGCAACC
CGCCGCAGAGAAGGATTTCAAGGACCTCAGCAGCGTGGAGATGATGGATG
TGTTGACTCGTCATCTCTTGAAGTGGCAGCAGGAGTATGGCAAATTTGGG
GAACGGTGAATGACGCCTCGTCGCTCCTCTCGTGCTCGCAACCAACCCTC
TCCAGCTATTCTTCAGCATACAAACTCCTCTAGCTCCTCCAATTCCATGG
CTCGCGAAAGAAGCACCCGGTCGAATCACAAAATCTCCTCCCCTCAGCGG
TCCTCCACCAATCGGTCCCAGTCGATCGACGATGCCGACACAGGCTCGAA
AAGTGACTTTCGAGAAACACGCCAGCGACAGCGTGCTCGGGGGGAGGAGG
ATAATGATCACCATATGAGACTTGAGGATGGTGATGACGATGACGGAGAA
GAAGATGACGAGGAGGAAGAAATTACCCGGTGTCTCTGTGGACAACAGGA
GTACCCGGGTCTGCCTCCTTCTCGACGTGATTTAAGTCGGCGCAATGGTT
TGCGAGCCGGCATGAAAGATGAGACATTCAATCTCGCCGCGGACGCATCA
GACCTGTTGCCAGACGAGATCGGGAGCATGTTCATCCAATGTGATTCGTG
CAAAGTCTGGCAGCATGGTGGCTGTGTGGGGATCATGGACGAGGCTATGA
GCCCCGATGAGTACTTTTGCGAAGAGTGTCGCAAGGACCTCCATAAAATC
ATCAGCGAAACAAATGGATCATATTCGTCCCAATATCTTCCTGTCGCTCC
TCCCCCTTCCACTGCTCCATCGTCACGAGAGTCGTCGCGGGAAACATCGA
GACGCGCCAAGGAACCAAAACCACGACACAATGATCCTACCAATCCTAAG
AGGCGATCAACGATGAATAGCCGTGATGCGGCTTATGACGAAGAAGAGCA
GCTGCGACGGGCCATCGAAGAGAGCAAGGAAGATAACAAACCAGCTGGTG
ATGATATTGCGGCCCGGAGGCCCAAGAGAAGTCGCAGTGACAGTGAAGCG
CAAAAACAAACGACTAAGCGACAGCGCACGAGCTCTCCCTCTCCGGGCGC
CGTTTCGAAAAGTAACCCTGCATCTCAGCCGGTCTCGGAGGATGAGTCGA
AGAAACCTGCCACCAATGGCGTCCGACGGCAGAGAGCTGCTTCACGCAGC
CAGCGTGATAAGGAAACCAAAGAACCCGAAGAACCTGAGACGGAGCAGCC
AGAGGTTGCAACTCGTCGGAAAAGCCGATCGGAGCGACAGAAGGGTGATG
ACGCTGAGTCCGACCTTGAGACAGGATCCCCAATCAAGCCTAATGCGAGC
GAACCCGAGCCGAAGCAACCCAGTCCGGAGGAGACGCCTGCCCCTGCCCC
CGAAGCTGCACCTTCGCGTCCGTCCACTCGCAAATCCGGCCGTCCGCCTG
CACGGCGTGGCGGTCGCATCGGACGGAATCAATATACTCGCGATCGTGAC
ACCAACGGCACCGACTCAACAACACGGTCGCCGCGGCGTGGACAATCGCA
TGACCTTGGAGGGGATTCGCCGCGTGTGGGTGTCAACGGGACACACATCA
ACAGCAGTGAATCGGGCAAGCCCAGCCGGCCCCGCTACGTGAACCAACGA
ACCACCATGAACGAGATGAAGCGACGGGTGACGGCGATCTTGGAGTTCAT
TTCACGCATGCAGGTGGAGATGGCTGTAGCAGGGGAGAGCACCACCCCGC
CGGGTAACGATGACCGGCCGAACGGGGTCAGCCGACTTCTGAGCGAGAGT
CAACTCCTCTCCAGTGCTATAGAGAGCGCTGGCCTGGAGGGCGGTTCAGT
GGCGCAACCCGCCGCAGAGAAGGATTTCAAGGACCTCAGCAGCGTGGAGA
TGATGGATGTGTTGACTCGTCATCTCTTGAAGTGGCAGCAGGAGTATGGC
AAATTTGGGGAACGGTGAATGACGCCTCGTCGCTCCTCTCGTGCTCGCAA
CCAACCCTCTCCAGCTATTCTTCAGCATACAAACTCCTCTAGCTCCTCCA
ATTCCATGGCTCGCGAAAGAAGCACCCGGTCGAATCACAAAATCTCCTCC
CCTCAGCGGTCCTCCACCAATCGGTCCCAGTCGATCGACGATGCCGACAC
AGGCTCGAAAAGTGACTTTCGAGAAACACGCCAGCGACAGCGTGCTCGGG
GGGAGGAGGATAATGATCACCATATGAGACTTGAGGATGGTGATGACGAT
GACGGAGAAGAAGATGACGAGGAGGAAGAAATTACCCGGTGTCTCTGTGG
ACAACAGGAGTACCCGGGTCTGCCTCCTTCTCGACGTGATTTAAGTCGGC
GCAATGGTTTGCGAGCCGGCATGAAAGATGAGACATTCAATCTCGCCGCG
GACGCATCAGACCTGTTGCCAGACGAGATCGGGAGCATGTTCATCCAATG
TGATTCGTGCAAAGTCTGGCAGCATGGTGGCTGTGTGGGGATCATGGACG
AGGCTATGAGCCCCGATGAGTACTTTTGCGAAGAGTGTCGCAAGGACCTC
CATAAAATCATCAGCGAAACAAATGGATCATATTCGTCCCAATATCTTCC
TGTCGCTCCTCCCCCTTCCACTGCTCCATCGTCACGAGAGTCGTCGCGGG
AAACATCGAGACGCGCCAAGGAACCAAAACCACGACACAATGATCCTACC
AATCCTAAGAGGCGATCAACGATGAATAGCCGTGATGCGGCTTATGACGA
AGAAGAGCAGCTGCGACGGGCCATCGAAGAGAGCAAGGAAGATAACAAAC
CAGCTGGTGATGATATTGCGGCCCGGAGGCCCAAGAGAAGTCGCAGTGAC
AGTGAAGCGCAAAAACAAACGACTAAGCGACAGCGCACGAGCTCTCCCTC
TCCGGGCGCCGTTTCGAAAAGTAACCCTGCATCTCAGCCGGTCTCGGAGG
ATGAGTCGAAGAAACCTGCCACCAATGGCGTCCGACGGCAGAGAGCTGCT
TCACGCAGCCAGCGTGATAAGGAAACCAAAGAACCCGAAGAACCTGAGAC
GGAGCAGCCAGAGGTTGCAACTCGTCGGAAAAGCCGATCGGAGCGACAGA
AGGGTGATGACGCTGAGTCCGACCTTGAGACAGGATCCCCAATCAAGCCT
AATGCGAGCGAACCCGAGCCGAAGCAACCCAGTCCGGAGGAGACGCCTGC
CCCTGCCCCCGAAGCTGCACCTTCGCGTCCGTCCACTCGCAAATCCGGCC
GTCCGCCTGCACGGCGTGGCGGTCGCATCGGACGGAATCAATATACTCGC
GATCGTGACACCAACGGCACCGACTCAACAACACGGTCGCCGCGGCGTGG
ACAATCGCATGACCTTGGAGGGGATTCGCCGCGTGTGGGTGTCAACGGGA
CACACATCAACAGCAGTGAATCGGGCAAGCCCAGCCGGCCCCGCTACGTG
AACCAACGAACCACCATGAACGAGATGAAGCGACGGGTGACGGCGATCTT
GGAGTTCATTTCACGCATGCAGGTGGAGATGGCTGTAGCAGGGGAGAGCA
CCACCCCGCCGGGTAACGATGACCGGCCGAACGGGGTCAGCCGACTTCTG
AGCGAGAGTCAACTCCTCTCCAGTGCTATAGAGAGCGCTGGCCTGGAGGG
CGGTTCAGTGGCGCAACCCGCCGCAGAGAAGGATTTCAAGGACCTCAGCA
GCGTGGAGATGATGGATGTGTTGACTCGTCATCTCTTGAAGTGGCAGCAG
GAGTATGGCAAATTTGGGGAACGGTGAATGACGCCTCGTCGCTCCTCTCG
TGCTCGCAACCAACCCTCTCCAGCTATTCTTCAGCATACAAACTCCTCTA
GCTCCTCCAATTCCATGGCTCGCGAAAGAAGCACCCGGTCGAATCACAAA
ATCTCCTCCCCTCAGCGGTCCTCCACCAATCGGTCCCAGTCGATCGACGA
TGCCGACACAGGCTCGAAAAGTGACTTTCGAGAAACACGCCAGCGACAGC
GTGCTCGGGGGGAGGAGGATAATGATCACCATATGAGACTTGAGGATGGT
GATGACGATGACGGAGAAGAAGATGACGAGGAGGAAGAAATTACCCGGTG
TCTCTGTGGACAACAGGAGTACCCGGGTCTGCCTCCTTCTCGACGTGATT
TAAGTCGGCGCAATGGTTTGCGAGCCGGCATGAAAGATGAGACATTCAAT
CTCGCCGCGGACGCATCAGACCTGTTGCCAGACGAGATCGGGAGCATGTT
CATCCAATGTGATTCGTGCAAAGTCTGGCAGCATGGTGGCTGTGTGGGGA
TCATGGACGAGGCTATGAGCCCCGATGAGTACTTTTGCGAAGAGTGTCGC
AAGGACCTCCATAAAATCATCAGCGAAACAAATGGATCATATTCGTCCCA
ATATCTTCCTGTCGCTCCTCCCCCTTCCACTGCTCCATCGTCACGAGAGT
CGTCGCGGGAAACATCGAGACGCGCCAAGGAACCAAAACCACGACACAAT
GATCCTACCAATCCTAAGAGGCGATCAACGATGAATAGCCGTGATGCGGC
TTATGACGAAGAAGAGCAGCTGCGACGGGCCATCGAAGAGAGCAAGGAAG
ATAACAAACCAGCTGGTGATGATATTGCGGCCCGGAGGCCCAAGAGAAGT
CGCAGTGACAGTGAAGCGCAAAAACAAACGACTAAGCGACAGCGCACGAG
CTCTCCCTCTCCGGGCGCCGTTTCGAAAAGTAACCCTGCATCTCAGCCGG
TCTCGGAGGATGAGTCGAAGAAACCTGCCACCAATGGCGTCCGACGGCAG
AGAGCTGCTTCACGCAGCCAGCGTGATAAGGAAACCAAAGAACCCGAAGA
ACCTGAGACGGAGCAGCCAGAGGTTGCAACTCGTCGGAAAAGCCGATCGG
AGCGACAGAAGGGTGATGACGCTGAGTCCGACCTTGAGACAGGATCCCCA
ATCAAGCCTAATGCGAGCGAACCCGAGCCGAAGCAACCCAGTCCGGAGGA
GACGCCTGCCCCTGCCCCCGAAGCTGCACCTTCGCGTCCGTCCACTCGCA
AATCCGGCCGTCCGCCTGCACGGCGTGGCGGTCGCATCGGACGGAATCAA
TATACTCGCGATCGTGACACCAACGGCACCGACTCAACAACACGGTCGCC
GCGGCGTGGACAATCGCATGACCTTGGAGGGGATTCGCCGCGTGTGGGTG
TCAACGGGACACACATCAACAGCAGTGAATCGGGCAAGCCCAGCCGGCCC
CGCTACGTGAACCAACGAACCACCATGAACGAGATGAAGCGACGGGTGAC
GGCGATCTTGGAGTTCATTTCACGCATGCAGGTGGAGATGGCTGTAGCAG
GGGAGAGCACCACCCCGCCGGGTAACGATGACCGGCCGAACGGGGTCAGC
CGACTTCTGAGCGAGAGTCAACTCCTCTCCAGTGCTATAGAGAGCGCTGG
CCTGGAGGGCGGTTCAGTGGCGCAACCCGCCGCAGAGAAGGATTTCAAGG
ACCTCAGCAGCGTGGAGATGATGGATGTGTTGACTCGTCATCTCTTGAAG
TGGCAGCAGGAGTATGGCAAATTTGGGGAACGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004887-T1.utr5p1 | KJC3_004887-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004887-T1.utr3p1 | KJC3_004887-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260NE0 |
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR019787 |
| DBxref | InterPro:IPR003903 |
| DBxref | InterPro:IPR001965 |
| DBxref | PFAM:PF00628 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1005234..1008163 + |
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