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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1013002..1015595- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004890-T1 ID=KJC3_004890-T1|Name=KJC3_004890-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2594bp|location=Sequence derived from alignment at ch4:1013002..1015595- (Aspergillus niger KJC3)
ATGATTGTTCCAGTAGATACTATCTAACTGTATCTACTGTAGATAGGCAG
AGTCAGTCGTAAGAAAGTAAAGTTTTGGAGAGCTGAAGCAACACTGGACT
GTAAACATCCCCCCAATCCGGCAAGGCGCGGTAAACAAACGCGTATCTCC
AGCTACTTCAACACCGTCTTTTCCTCTCGTCATCCTCACTTGTTCTCTTC
TCTCTCCTCTTTTCTTTCTATCCTCATCCCCTCCTCTCTCCACCTTCTAC
TTCTTCCATTCCATTCTTCCCCCCTCCCTTTCTTTCTTAAGCTTAAGCTT
ATCTTACATTCCTCTACCCCAGGAATTCTCCGCTTGATTTGAGATAGATC
TCACGGATCGTTCTCAATTCCCACCCCACGTACACCTTCCCCCGAGAAAG
ACTTCTTCTTCCCCGTAACAAGTCTTTTCTTGTCTCGTCTTTCGAGTTGT
TGCCCAACAGTTCGAAAGGCATTCGAGAAGAGACGCCCGAAGGACAGCCA
ATCTGGACTTCGACGCCCGCGTCCCCATCCCCTTCAGTGTCTTCCCGTCG
TCGTACCGGAGTGACGCTGTTCCTGAAGCTACTCTCGCGGCGCCTGCCAG
AGTAGAGGAAGAAGTCAATCTCGATCGCACTTCGCACGTCGAACGGGAAG
ATACTCGAACCTCTGCTCCTCTCCCGGACCCCCGTGTCTACGGAAAGGAA
GAAGTCGACCTTCACGCTTCTTCTTTTGTCGAGCAGGATCGTTACGGTCC
TAGACCCGGTGCTCCTTCAGCTTTCCGCGAGGAGGACGTGACTACTACTG
TCAATACTGTTCGATTTGACGAGCGTGTTGAGACTATTCCCCCCGTTGGT
GCCGGTGCTTCTTCTGCTGCTCCTCGGTATCCGCAAGTTGATCTAGCGCG
TGAACGGTAAGCCACTACTTTTTTTACTGGTCTCCATTTTTTTTTCTTTT
ATTTACATGTGTATTATTTTTGTTTAATTGTTTTTGTTTTTGTTTTTCTT
TTTTCCGTTTTCTTTCCCGGTGGCTGCCTGGCTGGGGATCGGATTGGCAC
GGGGCACCATCGACTCCAGCCCAAGTGGAGAGCGACAAGAAGCGGTGTCT
GGCCGTGGCTTCACTACTAGTCGCGTCCCTCCACTTCCTTCTTACGTGGC
ACCAAAACAAACAAGCCTCTCTTCCCCAACCCTCTTCTCATTTCCTCTTC
TACTTCCTCTTGCTTTCCTGTTTTCCTCTTTTCCTTTCCCCTTTTTCCTA
TTTCTTTCCCCCCATCCATTGCATTCCCACCCACTTGTGGTCCCAGCTTA
AGCTTCCCCTTCCCACACACCCTCCCATAAGAGGTATTAAGTCCTGTTCC
ACCCAATCATCTCACGTTCCCCCTCATCATACCCCAACCCTACTATACAT
CACATCCCCTTGCCTGCCTGCCTGCCTGCTTGCTTGCTTGCGTGCGTGCT
GTTTGTCTACCTATTACCCCATTGGACCTCCACCTTCCCGTCCTACATGA
CTATTGCATTAGTCACTCTTCTCTGACGCAACCATAGTTATCGTGAACCG
TCGGTCCGTTTCCAAGACCGTCAACCCACCTACGATCAGGCTCTCCAGAA
CCAGCTCGATATCACTGAGCGCGAGTATCGTCGTCGGGTCAACAACCCTA
CCTACGACGTTCCTGCCTCTTCGTACGACCGCCGCTCTCAGGCTTCGGTA
GATTCCTTCTCTGGTCCTCGCCAGCAGTCTAGGGACGTTTCGTACGACCG
CCAATTCAAGCAGTCCGAGTTTGACGTCTCGTACGACCGTGCTTACCAGC
CTAAGCCTGTCGACTCGTACCCCCGCGACCCTTACAGCCGCCGTCAACAG
AACGTTGAGCCGGTTCCCGAGTCTCCCAGCAGCTCGAACTCTGTAAAAGT
TCTCAAGACCAAGACTGTCATTGATTCCCCTCCTTCTCGCAAGATGGGTT
ACTACGACGACGACGGTAACTATCACTCCTTCCGTCGTGGTGTGGAGCGC
GCTGCCGACCGCATCATGCACCCTCACGGTCACCACGACCGCCAGGACGT
AGTCGTCGCTGACGAAGGCGGTCCAGTTCGTTTCCGTGAAGGCGTCCGCG
AGGATGTCCGTATCGTTGAGCCCCGTGCCGGTGGCAGCTCCTCGACCGCC
GAGACCGTGCCGATCCCCTGCCACTTCATCCGCATTGGCGACATCCTGAT
CCTTCAGGGCCGTCCCTGCCAGGTGATCCGCATCTCCGTCTCCCCCCAGA
CCGGCCAGCACCGTTACCTGGGTGTCGACCTGTTCACCCGTGAACTCCAG
GAGGAGTCCAGCTTCGTCTCCAACCCTTCTCCTTCCGTCGTGGTCCAGAC
CATGCTCGGCCCTGTCTACAAGACCTACCGCATCCTGGACCTCCGTGATG
ACGGCCGCCTGGTCGCCATGACCGAGACCGGTGATGTCAAGCAGGGTCTG
CCCGTGGTGCCCCAGGGTCACCTGTTCCGTCGCATCCGCGAGGCCTTCGA
GGATGGCCGTGGCAGCGTCCGCGCCCTGGTCATCAACGATGGTGGTCGCG
AGCTGGTCGTCGACTACAAGGTGGTCCACGCTTCCCGCCTGTAA back to topCoding sequence (CDS) from alignment at ch4:1013002..1015595- >KJC3_004890-T1 ID=KJC3_004890-T1|Name=KJC3_004890-T1|organism=Aspergillus niger KJC3|type=CDS|length=4527bp|location=Sequence derived from alignment at ch4:1013002..1015595- (Aspergillus niger KJC3)
TTATCGTGAACCGTCGGTCCGTTTCCAAGACCGTCAACCCACCTACGATC
AGGCTCTCCAGAACCAGCTCGATATCACTGAGCGCGAGTATCGTCGTCGG
GTCAACAACCCTACCTACGACGTTCCTGCCTCTTCGTACGACCGCCGCTC
TCAGGCTTCGGTAGATTCCTTCTCTGGTCCTCGCCAGCAGTCTAGGGACG
TTTCGTACGACCGCCAATTCAAGCAGTCCGAGTTTGACGTCTCGTACGAC
CGTGCTTACCAGCCTAAGCCTGTCGACTCGTACCCCCGCGACCCTTACAG
CCGCCGTCAACAGAACGTTGAGCCGGTTCCCGAGTCTCCCAGCAGCTCGA
ACTCTGTAAAAGTTCTCAAGACCAAGACTGTCATTGATTCCCCTCCTTCT
CGCAAGATGGGTTACTACGACGACGACGGTAACTATCACTCCTTCCGTCG
TGGTGTGGAGCGCGCTGCCGACCGCATCATGCACCCTCACGGTCACCACG
ACCGCCAGGACGTAGTCGTCGCTGACGAAGGCGGTCCAGTTCGTTTCCGT
GAAGGCGTCCGCGAGGATGTCCGTATCGTTGAGCCCCGTGCCGGTGGCAG
CTCCTCGACCGCCGAGACCGTGCCGATCCCCTGCCACTTCATCCGCATTG
GCGACATCCTGATCCTTCAGGGCCGTCCCTGCCAGGTGATCCGCATCTCC
GTCTCCCCCCAGACCGGCCAGCACCGTTACCTGGGTGTCGACCTGTTCAC
CCGTGAACTCCAGGAGGAGTCCAGCTTCGTCTCCAACCCTTCTCCTTCCG
TCGTGGTCCAGACCATGCTCGGCCCTGTCTACAAGACCTACCGCATCCTG
GACCTCCGTGATGACGGCCGCCTGGTCGCCATGACCGAGACCGGTGATGT
CAAGCAGGGTCTGCCCGTGGTGCCCCAGGGTCACCTGTTCCGTCGCATCC
GCGAGGCCTTCGAGGATGGCCGTGGCAGCGTCCGCGCCCTGGTCATCAAC
GATGGTGGTCGCGAGCTGGTCGTCGACTACAAGGTGGTCCACGCTTCCCG
CCTGTAATTCGAAAGGCATTCGAGAAGAGACGCCCGAAGGACAGCCAATC
TGGACTTCGACGCCCGCGTCCCCATCCCCTTCAGTGTCTTCCCGTCGTCG
TACCGGAGTGACGCTGTTCCTGAAGCTACTCTCGCGGCGCCTGCCAGAGT
AGAGGAAGAAGTCAATCTCGATCGCACTTCGCACGTCGAACGGGAAGATA
CTCGAACCTCTGCTCCTCTCCCGGACCCCCGTGTCTACGGAAAGGAAGAA
GTCGACCTTCACGCTTCTTCTTTTGTCGAGCAGGATCGTTACGGTCCTAG
ACCCGGTGCTCCTTCAGCTTTCCGCGAGGAGGACGTGACTACTACTGTCA
ATACTGTTCGATTTGACGAGCGTGTTGAGACTATTCCCCCCGTTGGTGCC
GGTGCTTCTTCTGCTGCTCCTCGGTATCCGCAAGTTGATCTAGCGCGTGA
ACGATGATTTTATCGTGAACCGTCGGTCCGTTTCCAAGACCGTCAACCCA
CCTACGATCAGGCTCTCCAGAACCAGCTCGATATCACTGAGCGCGAGTAT
CGTCGTCGGGTCAACAACCCTACCTACGACGTTCCTGCCTCTTCGTACGA
CCGCCGCTCTCAGGCTTCGGTAGATTCCTTCTCTGGTCCTCGCCAGCAGT
CTAGGGACGTTTCGTACGACCGCCAATTCAAGCAGTCCGAGTTTGACGTC
TCGTACGACCGTGCTTACCAGCCTAAGCCTGTCGACTCGTACCCCCGCGA
CCCTTACAGCCGCCGTCAACAGAACGTTGAGCCGGTTCCCGAGTCTCCCA
GCAGCTCGAACTCTGTAAAAGTTCTCAAGACCAAGACTGTCATTGATTCC
CCTCCTTCTCGCAAGATGGGTTACTACGACGACGACGGTAACTATCACTC
CTTCCGTCGTGGTGTGGAGCGCGCTGCCGACCGCATCATGCACCCTCACG
GTCACCACGACCGCCAGGACGTAGTCGTCGCTGACGAAGGCGGTCCAGTT
CGTTTCCGTGAAGGCGTCCGCGAGGATGTCCGTATCGTTGAGCCCCGTGC
CGGTGGCAGCTCCTCGACCGCCGAGACCGTGCCGATCCCCTGCCACTTCA
TCCGCATTGGCGACATCCTGATCCTTCAGGGCCGTCCCTGCCAGGTGATC
CGCATCTCCGTCTCCCCCCAGACCGGCCAGCACCGTTACCTGGGTGTCGA
CCTGTTCACCCGTGAACTCCAGGAGGAGTCCAGCTTCGTCTCCAACCCTT
CTCCTTCCGTCGTGGTCCAGACCATGCTCGGCCCTGTCTACAAGACCTAC
CGCATCCTGGACCTCCGTGATGACGGCCGCCTGGTCGCCATGACCGAGAC
CGGTGATGTCAAGCAGGGTCTGCCCGTGGTGCCCCAGGGTCACCTGTTCC
GTCGCATCCGCGAGGCCTTCGAGGATGGCCGTGGCAGCGTCCGCGCCCTG
GTCATCAACGATGGTGGTCGCGAGCTGGTCGTCGACTACAAGGTGGTCCA
CGCTTCCCGCCTGTAATTCGAAAGGCATTCGAGAAGAGACGCCCGAAGGA
CAGCCAATCTGGACTTCGACGCCCGCGTCCCCATCCCCTTCAGTGTCTTC
CCGTCGTCGTACCGGAGTGACGCTGTTCCTGAAGCTACTCTCGCGGCGCC
TGCCAGAGTAGAGGAAGAAGTCAATCTCGATCGCACTTCGCACGTCGAAC
GGGAAGATACTCGAACCTCTGCTCCTCTCCCGGACCCCCGTGTCTACGGA
AAGGAAGAAGTCGACCTTCACGCTTCTTCTTTTGTCGAGCAGGATCGTTA
CGGTCCTAGACCCGGTGCTCCTTCAGCTTTCCGCGAGGAGGACGTGACTA
CTACTGTCAATACTGTTCGATTTGACGAGCGTGTTGAGACTATTCCCCCC
GTTGGTGCCGGTGCTTCTTCTGCTGCTCCTCGGTATCCGCAAGTTGATCT
AGCGCGTGAACGATGATTTTATCGTGAACCGTCGGTCCGTTTCCAAGACC
GTCAACCCACCTACGATCAGGCTCTCCAGAACCAGCTCGATATCACTGAG
CGCGAGTATCGTCGTCGGGTCAACAACCCTACCTACGACGTTCCTGCCTC
TTCGTACGACCGCCGCTCTCAGGCTTCGGTAGATTCCTTCTCTGGTCCTC
GCCAGCAGTCTAGGGACGTTTCGTACGACCGCCAATTCAAGCAGTCCGAG
TTTGACGTCTCGTACGACCGTGCTTACCAGCCTAAGCCTGTCGACTCGTA
CCCCCGCGACCCTTACAGCCGCCGTCAACAGAACGTTGAGCCGGTTCCCG
AGTCTCCCAGCAGCTCGAACTCTGTAAAAGTTCTCAAGACCAAGACTGTC
ATTGATTCCCCTCCTTCTCGCAAGATGGGTTACTACGACGACGACGGTAA
CTATCACTCCTTCCGTCGTGGTGTGGAGCGCGCTGCCGACCGCATCATGC
ACCCTCACGGTCACCACGACCGCCAGGACGTAGTCGTCGCTGACGAAGGC
GGTCCAGTTCGTTTCCGTGAAGGCGTCCGCGAGGATGTCCGTATCGTTGA
GCCCCGTGCCGGTGGCAGCTCCTCGACCGCCGAGACCGTGCCGATCCCCT
GCCACTTCATCCGCATTGGCGACATCCTGATCCTTCAGGGCCGTCCCTGC
CAGGTGATCCGCATCTCCGTCTCCCCCCAGACCGGCCAGCACCGTTACCT
GGGTGTCGACCTGTTCACCCGTGAACTCCAGGAGGAGTCCAGCTTCGTCT
CCAACCCTTCTCCTTCCGTCGTGGTCCAGACCATGCTCGGCCCTGTCTAC
AAGACCTACCGCATCCTGGACCTCCGTGATGACGGCCGCCTGGTCGCCAT
GACCGAGACCGGTGATGTCAAGCAGGGTCTGCCCGTGGTGCCCCAGGGTC
ACCTGTTCCGTCGCATCCGCGAGGCCTTCGAGGATGGCCGTGGCAGCGTC
CGCGCCCTGGTCATCAACGATGGTGGTCGCGAGCTGGTCGTCGACTACAA
GGTGGTCCACGCTTCCCGCCTGTAATTCGAAAGGCATTCGAGAAGAGACG
CCCGAAGGACAGCCAATCTGGACTTCGACGCCCGCGTCCCCATCCCCTTC
AGTGTCTTCCCGTCGTCGTACCGGAGTGACGCTGTTCCTGAAGCTACTCT
CGCGGCGCCTGCCAGAGTAGAGGAAGAAGTCAATCTCGATCGCACTTCGC
ACGTCGAACGGGAAGATACTCGAACCTCTGCTCCTCTCCCGGACCCCCGT
GTCTACGGAAAGGAAGAAGTCGACCTTCACGCTTCTTCTTTTGTCGAGCA
GGATCGTTACGGTCCTAGACCCGGTGCTCCTTCAGCTTTCCGCGAGGAGG
ACGTGACTACTACTGTCAATACTGTTCGATTTGACGAGCGTGTTGAGACT
ATTCCCCCCGTTGGTGCCGGTGCTTCTTCTGCTGCTCCTCGGTATCCGCA
AGTTGATCTAGCGCGTGAACGATGATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR008991 |
| DBxref | InterPro:IPR037318 |
| DBxref | InterPro:IPR014722 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1013002..1015595 - |
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