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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1022143..1023426+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004893-T1 ID=KJC3_004893-T1|Name=KJC3_004893-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1284bp|location=Sequence derived from alignment at ch4:1022143..1023426+ (Aspergillus niger KJC3)
CCCAACTCGCCCTACTGACTATATTACACATCCCATCTAAGAACATCACC
ATCATCACCATCATCCCCCAAAACCATGCCATCATCATCATCACCATCAT
CCTCCCTCCCCCTCCCCCCATCCATAACCTCCCGCTTCATCCCAACAACC
CCCTCCCTAACCACCCACATCCTCGAATCCAACGCCCCCACAACCACCAC
TCCATCCCCCCGCAAACTCATCCTCCTCCTCCACGGCTTCCCCGAACTCG
CCTACTCCTGGCGCCACGTCCTCCCCCAACTCTCCTCCCAAGCCGGCGCG
GACTACCACATCGTCGCCCCGGACGGGCGCGGGTTCGGCCGCACAACCGG
CTGGGAAAGAGATGCCCCCAACTTCACCGACTCGAACCTCACCACATTCA
CCGGGCTTTCCTTAGTCCGGGACGTGGTGAGCCTAGTCCATGCACTGGGC
TACACCACCGTGGAATGCGTAGTCGGTCATGATGCGGGGGCCGTGACGGC
TGCTTTTTGTGCTGTCGCTAGACCGGATATGTTCCGGAGTGTGGTGCTGC
TAAGTCATCCGTTTCCGGGGGTTCCGTCGCCTGTTATTCCTCCGGAGAAG
AAGAAGGAAGATGATAGTAAAGAAGGGGACATACAAACCGACCTCAAAAA
CCTCGGCCTGAAACACCACAAATGGTACTACTCCACCGAAAACGCAAGTC
CCGAGATGGAGAACCCCGCTCAGGGTCTCCACGATTTCTTACGGGGATAC
TTCCACCTGAAGAGTGGATGTTGGGAAGGGAATAATCCCTCCAAAATGGG
ACCTATCTCCTCGTGGACCGGGGAGCAATTAGCCAGAATGCCGGGGTATT
ATATCATGCCGGTGGGGTTGAGCATGCCGGAGACGGTGGAGGAGATGATG
CGGCAGGCTGATGCGCAGGGAGTTGCGCGGAGTAAAGAGTGGCTCAGTGA
TGAGGAGTTGTCGGTATATGTTGGAGAGTTCGCCCGTACAGGGTTCCAGG
GCGCGTTGAATTGGTATCGGGTGAGGACGACGCCGGGGAGGCAATATACC
TGGGATTGGGAAGTGTTTGCCGGTAGGAGGATTGAGATTCCGTGTGCGTT
CTGCTCCGGCGAGAGTGATTGGGGGGTGTACCAGGAGCCGGGGGCGTTGG
AGAATATGCGGAACGGAACGAGTTGTGGGGATTTGAGAGAGGTGAGGTTG
ATTCCTGGGGTGGGTCATTGGGCGCCGCAGGAGAGGCCGGGGGAGGTGGT
GGAGGTGATTTTGGGGGTGGTGAGGGGGCTGTAG back to topCoding sequence (CDS) from alignment at ch4:1022143..1023426+ >KJC3_004893-T1 ID=KJC3_004893-T1|Name=KJC3_004893-T1|organism=Aspergillus niger KJC3|type=CDS|length=1209bp|location=Sequence derived from alignment at ch4:1022143..1023426+ (Aspergillus niger KJC3)
ATGCCATCATCATCATCACCATCATCCTCCCTCCCCCTCCCCCCATCCAT
AACCTCCCGCTTCATCCCAACAACCCCCTCCCTAACCACCCACATCCTCG
AATCCAACGCCCCCACAACCACCACTCCATCCCCCCGCAAACTCATCCTC
CTCCTCCACGGCTTCCCCGAACTCGCCTACTCCTGGCGCCACGTCCTCCC
CCAACTCTCCTCCCAAGCCGGCGCGGACTACCACATCGTCGCCCCGGACG
GGCGCGGGTTCGGCCGCACAACCGGCTGGGAAAGAGATGCCCCCAACTTC
ACCGACTCGAACCTCACCACATTCACCGGGCTTTCCTTAGTCCGGGACGT
GGTGAGCCTAGTCCATGCACTGGGCTACACCACCGTGGAATGCGTAGTCG
GTCATGATGCGGGGGCCGTGACGGCTGCTTTTTGTGCTGTCGCTAGACCG
GATATGTTCCGGAGTGTGGTGCTGCTAAGTCATCCGTTTCCGGGGGTTCC
GTCGCCTGTTATTCCTCCGGAGAAGAAGAAGGAAGATGATAGTAAAGAAG
GGGACATACAAACCGACCTCAAAAACCTCGGCCTGAAACACCACAAATGG
TACTACTCCACCGAAAACGCAAGTCCCGAGATGGAGAACCCCGCTCAGGG
TCTCCACGATTTCTTACGGGGATACTTCCACCTGAAGAGTGGATGTTGGG
AAGGGAATAATCCCTCCAAAATGGGACCTATCTCCTCGTGGACCGGGGAG
CAATTAGCCAGAATGCCGGGGTATTATATCATGCCGGTGGGGTTGAGCAT
GCCGGAGACGGTGGAGGAGATGATGCGGCAGGCTGATGCGCAGGGAGTTG
CGCGGAGTAAAGAGTGGCTCAGTGATGAGGAGTTGTCGGTATATGTTGGA
GAGTTCGCCCGTACAGGGTTCCAGGGCGCGTTGAATTGGTATCGGGTGAG
GACGACGCCGGGGAGGCAATATACCTGGGATTGGGAAGTGTTTGCCGGTA
GGAGGATTGAGATTCCGTGTGCGTTCTGCTCCGGCGAGAGTGATTGGGGG
GTGTACCAGGAGCCGGGGGCGTTGGAGAATATGCGGAACGGAACGAGTTG
TGGGGATTTGAGAGAGGTGAGGTTGATTCCTGGGGTGGGTCATTGGGCGC
CGCAGGAGAGGCCGGGGGAGGTGGTGGAGGTGATTTTGGGGGTGGTGAGG
GGGCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004893-T1.utr5p1 | KJC3_004893-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0014065 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR000639 |
| DBxref | PFAM:PF12146 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1022143..1023426 + |
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