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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1028794..1030898- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004898-T1 ID=KJC3_004898-T1|Name=KJC3_004898-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2105bp|location=Sequence derived from alignment at ch4:1028794..1030898- (Aspergillus niger KJC3)
ATGGCCGGCGTGAACCGGTCCTTTAGTTACAGTCGCGGCGACGATGCGTT
GTTGAGAGATGATGAGCGAGAGATTTCACCCCTCCGATCCGCAGAAGACG
GTCTCTACAGTACATCGTATGGCGACGTCTCTCCGCTATCTGCTGGGGTT
CAAGCGCAGAATCGGCCATTCGACCGAGGTCTGGTGTCAGTCCCGGAGGG
TCAGACCCTGGAGCGCCACATGACCTCTACGCCGGGGATGGATAATCTAG
GGCCGGCCTCTGTGGGTGGCGGAATCAGTGGTATCGCTCTTGGCGTGGCC
AATTCTCATAATCGCCAGAGTGGAGTTGACGCTTTTAGGGAAACAGATGT
GCCAGTACGCAATCTCCCCGCAGAACGGGATTTCAACACCACCGGCTCCG
ATAACCCCTATATACCTGCTCCGCCAGATGGAGACATATATCCCAGTTCA
GAGGCGGTGAGGTATCGCGACTCTTACAGCTCGCATACCGGGCTTGGTGC
TGGCGCGCCTTTTGCCGAACATAGCACGCCGGGCACGACGCCATCCCAAC
GTAGTTTCTTCGATAGTCCGTACCAAGGCGTGGATGCTGGACCGTACCAG
CGGCACTCGGCTTATAGTTCTCACGACTACCCGCTGGTCATCAATCCGGA
TGACATTGCTGACGACGGCGATGATGGTTTCCCAGTCCACCCGAAGGGAG
CAGCGGACTACAGATCGAACGCTAACGTACCTGGTACAGGTGTCGCCGGC
GCAGCGGCTGCTGGGGGGTTTCTTGGGAAATTTCGGGCGCTGTTTAAGAG
AGAAGAACCTAGTCCCTTCTACGATTCAGACATTGGAGGTGGTCTGGGAG
GAGCCGAAAAGGCACAAGGCGGTAGGCACATTATTGGAGGAGGCAGCCGT
AAGCGCGGTTGGATTGTTGGGCTCATATTGGCGGCGGTTATCGTGGCAGC
TATTGTTGGGGGCGCTGTCGGCGGTATTCTGGGCCATCAGGAACACGACG
GTGATACATCGTCGTCGTCATCATCATCATCATCATCAGGCACAGGGTCT
GGTGGTTCGGACAAAGGTGATGGGTTGCTTGACAAGGATTCCGACGAGAT
CAAAGCACTCATGAACAACAAGAACCTCCACAAAGTGTTTCCTGGTGTCG
ACTATACCCCGTGGGGAGTGCAGTATCCACTGTGCCTCCAATATCCTCCG
TCGCAGAATAACGTTACGCGCGACCTGGCGGTGCTTACGCAGTTGACTAA
TACTATCAGGCTCTACGGCACCGACTGCAATCAGACCGAAATGGTCCTCG
AGGCTATTGACCGCTTGCAGTTGACTAATATGAAGCTCTGGCTGGGCGTG
TGGATTGATACCAATACAACGACTACGGATCGCCAGATCAGCCAATTGTA
TAAGATCGTGGAAAATGCGAACGACACCTCTATTTTCAAAGGAGCTATTG
TCGGTAATGAAGCCCTCTATCGAGCAGGCTCGGACGTGGCGAGTGCAGAA
ACGAATCTGATCGGCTACATTAACGATGTCAAAGACCACTTCAAAGACAA
GAATATTGACCTCCCAGTGGGCACCTCAGACTTGGGCGACAATTGGAATG
CACAGCTAGTCAGCGCGGCCGACTTTGTCATGTCGAACATTCATCCGTTC
TTCGGAGGAGTAGAGATTGACGACGCTGCCAGCTGGACATGGACGTTTTG
GCAGACGCATGACACCCCACTCACAGCGGGAACGAACAAACAGCAGATCA
TATCAGAGGTGGGATGGCCGACGGGAGGAGGGAACGACTGTGGGTCCGAC
AACAAGTGTCAGAATGACAAGCAGGGCGCCGTGGCGGGCATCGATGAGCT
GAACCAGTTCCTGTCGGAGTGGGTTTGTCAGGCTTTGGACAATGGTACAG
AGTATTTCTGGTATGTTCGCAGATATCCTCATTGGTAAGACTCGGCTAAA
ACATGCGCAGGTTTGAAGCTTTCGATGAGCCGTGGAAGGTCCAGTACAAC
ACGCCCGGTCAGGAGTGGGAAGACAAATGGGGGCTGATGGACTCGGCTCG
CAATCTGAAGCCGGGCGTCAAGATCCCCGATTGTGGCGGCAAGACGATTA
CGTGA back to topCoding sequence (CDS) from alignment at ch4:1028794..1030898- >KJC3_004898-T1 ID=KJC3_004898-T1|Name=KJC3_004898-T1|organism=Aspergillus niger KJC3|type=CDS|length=5967bp|location=Sequence derived from alignment at ch4:1028794..1030898- (Aspergillus niger KJC3)
GTTTGAAGCTTTCGATGAGCCGTGGAAGGTCCAGTACAACACGCCCGGTC
AGGAGTGGGAAGACAAATGGGGGCTGATGGACTCGGCTCGCAATCTGAAG
CCGGGCGTCAAGATCCCCGATTGTGGCGGCAAGACGATTACGTGAATGTG
CCAGTACGCAATCTCCCCGCAGAACGGGATTTCAACACCACCGGCTCCGA
TAACCCCTATATACCTGCTCCGCCAGATGGAGACATATATCCCAGTTCAG
AGGCGGTGAGGTATCGCGACTCTTACAGCTCGCATACCGGGCTTGGTGCT
GGCGCGCCTTTTGCCGAACATAGCACGCCGGGCACGACGCCATCCCAACG
TAGTTTCTTCGATAGTCCGTACCAAGGCGTGGATGCTGGACCGTACCAGC
GGCACTCGGCTTATAGTTCTCACGACTACCCGCTGGTCATCAATCCGGAT
GACATTGCTGACGACGGCGATGATGGTTTCCCAGTCCACCCGAAGGGAGC
AGCGGACTACAGATCGAACGCTAACGTACCTGGTACAGGTGTCGCCGGCG
CAGCGGCTGCTGGGGGGTTTCTTGGGAAATTTCGGGCGCTGTTTAAGAGA
GAAGAACCTAGTCCCTTCTACGATTCAGACATTGGAGGTGGTCTGGGAGG
AGCCGAAAAGGCACAAGGCGGTAGGCACATTATTGGAGGAGGCAGCCGTA
AGCGCGGTTGGATTGTTGGGCTCATATTGGCGGCGGTTATCGTGGCAGCT
ATTGTTGGGGGCGCTGTCGGCGGTATTCTGGGCCATCAGGAACACGACGG
TGATACATCGTCGTCGTCATCATCATCATCATCATCAGGCACAGGGTCTG
GTGGTTCGGACAAAGGTGATGGGTTGCTTGACAAGGATTCCGACGAGATC
AAAGCACTCATGAACAACAAGAACCTCCACAAAGTGTTTCCTGGTGTCGA
CTATACCCCGTGGGGAGTGCAGTATCCACTGTGCCTCCAATATCCTCCGT
CGCAGAATAACGTTACGCGCGACCTGGCGGTGCTTACGCAGTTGACTAAT
ACTATCAGGCTCTACGGCACCGACTGCAATCAGACCGAAATGGTCCTCGA
GGCTATTGACCGCTTGCAGTTGACTAATATGAAGCTCTGGCTGGGCGTGT
GGATTGATACCAATACAACGACTACGGATCGCCAGATCAGCCAATTGTAT
AAGATCGTGGAAAATGCGAACGACACCTCTATTTTCAAAGGAGCTATTGT
CGGTAATGAAGCCCTCTATCGAGCAGGCTCGGACGTGGCGAGTGCAGAAA
CGAATCTGATCGGCTACATTAACGATGTCAAAGACCACTTCAAAGACAAG
AATATTGACCTCCCAGTGGGCACCTCAGACTTGGGCGACAATTGGAATGC
ACAGCTAGTCAGCGCGGCCGACTTTGTCATGTCGAACATTCATCCGTTCT
TCGGAGGAGTAGAGATTGACGACGCTGCCAGCTGGACATGGACGTTTTGG
CAGACGCATGACACCCCACTCACAGCGGGAACGAACAAACAGCAGATCAT
ATCAGAGGTGGGATGGCCGACGGGAGGAGGGAACGACTGTGGGTCCGACA
ACAAGTGTCAGAATGACAAGCAGGGCGCCGTGGCGGGCATCGATGAGCTG
AACCAGTTCCTGTCGGAGTGGGTTTGTCAGGCTTTGGACAATGGTACAGA
GTATTTCTGATGGCCGGCGTGAACCGGTCCTTTAGTTACAGTCGCGGCGA
CGATGCGTTGTTGAGAGATGATGAGCGAGAGATTTCACCCCTCCGATCCG
CAGAAGACGGTCTCTACAGTACATCGTATGGCGACGTCTCTCCGCTATCT
GCTGGGGTTCAAGCGCAGAATCGGCCATTCGACCGAGGTCTGGTGTCAGT
CCCGGAGGGTCAGACCCTGGAGCGCCACATGACCTCTACGCCGGGGATGG
ATAATCTAGGGCCGGCCTCTGTGGGTGGCGGAATCAGTGGTTTGAAGCTT
TCGATGAGCCGTGGAAGGTCCAGTACAACACGCCCGGTCAGGAGTGGGAA
GACAAATGGGGGCTGATGGACTCGGCTCGCAATCTGAAGCCGGGCGTCAA
GATCCCCGATTGTGGCGGCAAGACGATTACGTGAATGTGCCAGTACGCAA
TCTCCCCGCAGAACGGGATTTCAACACCACCGGCTCCGATAACCCCTATA
TACCTGCTCCGCCAGATGGAGACATATATCCCAGTTCAGAGGCGGTGAGG
TATCGCGACTCTTACAGCTCGCATACCGGGCTTGGTGCTGGCGCGCCTTT
TGCCGAACATAGCACGCCGGGCACGACGCCATCCCAACGTAGTTTCTTCG
ATAGTCCGTACCAAGGCGTGGATGCTGGACCGTACCAGCGGCACTCGGCT
TATAGTTCTCACGACTACCCGCTGGTCATCAATCCGGATGACATTGCTGA
CGACGGCGATGATGGTTTCCCAGTCCACCCGAAGGGAGCAGCGGACTACA
GATCGAACGCTAACGTACCTGGTACAGGTGTCGCCGGCGCAGCGGCTGCT
GGGGGGTTTCTTGGGAAATTTCGGGCGCTGTTTAAGAGAGAAGAACCTAG
TCCCTTCTACGATTCAGACATTGGAGGTGGTCTGGGAGGAGCCGAAAAGG
CACAAGGCGGTAGGCACATTATTGGAGGAGGCAGCCGTAAGCGCGGTTGG
ATTGTTGGGCTCATATTGGCGGCGGTTATCGTGGCAGCTATTGTTGGGGG
CGCTGTCGGCGGTATTCTGGGCCATCAGGAACACGACGGTGATACATCGT
CGTCGTCATCATCATCATCATCATCAGGCACAGGGTCTGGTGGTTCGGAC
AAAGGTGATGGGTTGCTTGACAAGGATTCCGACGAGATCAAAGCACTCAT
GAACAACAAGAACCTCCACAAAGTGTTTCCTGGTGTCGACTATACCCCGT
GGGGAGTGCAGTATCCACTGTGCCTCCAATATCCTCCGTCGCAGAATAAC
GTTACGCGCGACCTGGCGGTGCTTACGCAGTTGACTAATACTATCAGGCT
CTACGGCACCGACTGCAATCAGACCGAAATGGTCCTCGAGGCTATTGACC
GCTTGCAGTTGACTAATATGAAGCTCTGGCTGGGCGTGTGGATTGATACC
AATACAACGACTACGGATCGCCAGATCAGCCAATTGTATAAGATCGTGGA
AAATGCGAACGACACCTCTATTTTCAAAGGAGCTATTGTCGGTAATGAAG
CCCTCTATCGAGCAGGCTCGGACGTGGCGAGTGCAGAAACGAATCTGATC
GGCTACATTAACGATGTCAAAGACCACTTCAAAGACAAGAATATTGACCT
CCCAGTGGGCACCTCAGACTTGGGCGACAATTGGAATGCACAGCTAGTCA
GCGCGGCCGACTTTGTCATGTCGAACATTCATCCGTTCTTCGGAGGAGTA
GAGATTGACGACGCTGCCAGCTGGACATGGACGTTTTGGCAGACGCATGA
CACCCCACTCACAGCGGGAACGAACAAACAGCAGATCATATCAGAGGTGG
GATGGCCGACGGGAGGAGGGAACGACTGTGGGTCCGACAACAAGTGTCAG
AATGACAAGCAGGGCGCCGTGGCGGGCATCGATGAGCTGAACCAGTTCCT
GTCGGAGTGGGTTTGTCAGGCTTTGGACAATGGTACAGAGTATTTCTGAT
GGCCGGCGTGAACCGGTCCTTTAGTTACAGTCGCGGCGACGATGCGTTGT
TGAGAGATGATGAGCGAGAGATTTCACCCCTCCGATCCGCAGAAGACGGT
CTCTACAGTACATCGTATGGCGACGTCTCTCCGCTATCTGCTGGGGTTCA
AGCGCAGAATCGGCCATTCGACCGAGGTCTGGTGTCAGTCCCGGAGGGTC
AGACCCTGGAGCGCCACATGACCTCTACGCCGGGGATGGATAATCTAGGG
CCGGCCTCTGTGGGTGGCGGAATCAGTGGTTTGAAGCTTTCGATGAGCCG
TGGAAGGTCCAGTACAACACGCCCGGTCAGGAGTGGGAAGACAAATGGGG
GCTGATGGACTCGGCTCGCAATCTGAAGCCGGGCGTCAAGATCCCCGATT
GTGGCGGCAAGACGATTACGTGAATGTGCCAGTACGCAATCTCCCCGCAG
AACGGGATTTCAACACCACCGGCTCCGATAACCCCTATATACCTGCTCCG
CCAGATGGAGACATATATCCCAGTTCAGAGGCGGTGAGGTATCGCGACTC
TTACAGCTCGCATACCGGGCTTGGTGCTGGCGCGCCTTTTGCCGAACATA
GCACGCCGGGCACGACGCCATCCCAACGTAGTTTCTTCGATAGTCCGTAC
CAAGGCGTGGATGCTGGACCGTACCAGCGGCACTCGGCTTATAGTTCTCA
CGACTACCCGCTGGTCATCAATCCGGATGACATTGCTGACGACGGCGATG
ATGGTTTCCCAGTCCACCCGAAGGGAGCAGCGGACTACAGATCGAACGCT
AACGTACCTGGTACAGGTGTCGCCGGCGCAGCGGCTGCTGGGGGGTTTCT
TGGGAAATTTCGGGCGCTGTTTAAGAGAGAAGAACCTAGTCCCTTCTACG
ATTCAGACATTGGAGGTGGTCTGGGAGGAGCCGAAAAGGCACAAGGCGGT
AGGCACATTATTGGAGGAGGCAGCCGTAAGCGCGGTTGGATTGTTGGGCT
CATATTGGCGGCGGTTATCGTGGCAGCTATTGTTGGGGGCGCTGTCGGCG
GTATTCTGGGCCATCAGGAACACGACGGTGATACATCGTCGTCGTCATCA
TCATCATCATCATCAGGCACAGGGTCTGGTGGTTCGGACAAAGGTGATGG
GTTGCTTGACAAGGATTCCGACGAGATCAAAGCACTCATGAACAACAAGA
ACCTCCACAAAGTGTTTCCTGGTGTCGACTATACCCCGTGGGGAGTGCAG
TATCCACTGTGCCTCCAATATCCTCCGTCGCAGAATAACGTTACGCGCGA
CCTGGCGGTGCTTACGCAGTTGACTAATACTATCAGGCTCTACGGCACCG
ACTGCAATCAGACCGAAATGGTCCTCGAGGCTATTGACCGCTTGCAGTTG
ACTAATATGAAGCTCTGGCTGGGCGTGTGGATTGATACCAATACAACGAC
TACGGATCGCCAGATCAGCCAATTGTATAAGATCGTGGAAAATGCGAACG
ACACCTCTATTTTCAAAGGAGCTATTGTCGGTAATGAAGCCCTCTATCGA
GCAGGCTCGGACGTGGCGAGTGCAGAAACGAATCTGATCGGCTACATTAA
CGATGTCAAAGACCACTTCAAAGACAAGAATATTGACCTCCCAGTGGGCA
CCTCAGACTTGGGCGACAATTGGAATGCACAGCTAGTCAGCGCGGCCGAC
TTTGTCATGTCGAACATTCATCCGTTCTTCGGAGGAGTAGAGATTGACGA
CGCTGCCAGCTGGACATGGACGTTTTGGCAGACGCATGACACCCCACTCA
CAGCGGGAACGAACAAACAGCAGATCATATCAGAGGTGGGATGGCCGACG
GGAGGAGGGAACGACTGTGGGTCCGACAACAAGTGTCAGAATGACAAGCA
GGGCGCCGTGGCGGGCATCGATGAGCTGAACCAGTTCCTGTCGGAGTGGG
TTTGTCAGGCTTTGGACAATGGTACAGAGTATTTCTGATGGCCGGCGTGA
ACCGGTCCTTTAGTTACAGTCGCGGCGACGATGCGTTGTTGAGAGATGAT
GAGCGAGAGATTTCACCCCTCCGATCCGCAGAAGACGGTCTCTACAGTAC
ATCGTATGGCGACGTCTCTCCGCTATCTGCTGGGGTTCAAGCGCAGAATC
GGCCATTCGACCGAGGTCTGGTGTCAGTCCCGGAGGGTCAGACCCTGGAG
CGCCACATGACCTCTACGCCGGGGATGGATAATCTAGGGCCGGCCTCTGT
GGGTGGCGGAATCAGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH17 |
| DBxref | InterPro:IPR017853 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1028794..1030898 - |
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