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KJC3_004901-T1, KJC3_004901-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004901-T1
Unique NameKJC3_004901-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1056709..1058696-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004901-T1 ID=KJC3_004901-T1|Name=KJC3_004901-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1988bp|location=Sequence derived from alignment at ch4:1056709..1058696- (Aspergillus niger KJC3)
CTCTGGTCCCCATCGTCGCATATTGCTTCACACGGGCTTGTTCGTCGCAC
TGTTATCTCGCTCCGTGGAAGCTGTATATACTTTATGTTAATATGGATAC
ATATGCGGGTCGACTTCCCTGAAACTGGCTAGCTGACTGTTCTCCGATGC
GGAGGCGTTTGTAAGCCTTCCACGTTCTGTTTCAAATGGCGCGCCCAGAT
AGGCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTGTG
TGTATGTGTATATGCATGCTATATTGTCACAAAGCCGTTATGCAGTAAGT
GCCCCCTGAGCCAATGGCTTACTTCCGCCGCTAATTGTCCGAATTAGTTG
ACTACCTGATCCGCCCTCTCCCAAAATATTCCCACGGCCGTCGAGTTGGC
GCTGGCATAGCCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTAT
TATAACCTATCTCCGGCTGTTGTTCAATATCACCCGCAACCCTGGCTTCT
TACCCCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAGACGGAACCATCG
GACCGCCCTCCACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGA
GAAGCCGGATAAGACGGACGTTGATATTGAAAGAGGTGCAGACGGCAACG
CCGACAGTGGTGCAATTCCTTTGGATATTATTGGCTTGGAGAGTTTCTAT
ACAAAAGATGTTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTC
GACATGTTCTCGCTACAAGCCTGATAGAGCACATCACTGTCGAGAGGTAG
ACAGGTGTGTGCTTAAGATGGACCACTTTTGTCCTTGGTGAGTTCCTCTT
CCTCAGTGATCACTGGACCGGACTGTCATTAACATTTGATCAGGGTAGGA
GGCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAGTTCGTGTTTTA
TACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACCTTCACGG
CAGAGATTATTCAAGATGTGAGAAAATGTCTTTCAAGCTCTCTGGTCTGT
AGACTAACCGTTTTCTTTTGCATAGGCTGGCGGAGCCAATGTTCATCTGG
CTATCGGTATTGGATTGTAAGTATTTTCAACGTATGCTTCAGGTTTACCG
ATCGCCTTCTAACGATCAGTAGGAGCTCCCTGTTCGGTCTTTTCTCCTTC
GGGATGACTATCAGTTCCTTACAGCTTGCGATGTGGAATCTGTCAACGAT
TGAGAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTGC
CAGATCGTATGCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCACT
TTCCGCACCATAACGTACCCACTTCCACCTGTGCCTCTCTCCCCTGAGGC
GGCGAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTCC
AAACCCTGCCTGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAAC
CTCCAACAGGTCCTGGGGTATTCCATCATCGACTGGTTTCTACCTCTCAG
ACAAAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTAG
GACCGGTAGTGTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACCC
GAATCGCAGCCCACAACACAGAATGACACAGAAAGAAAACATAAGCGAAG
ACGAAGTTCGCATAGACGATCGCAAGGGTGACAAATTGGATATTCCATAG
ATTCATTGTCCATTTCATCATATACTACCACACGCATTGACCTTCTCAAA
CCTTCATCCGAGTTTGCCTTACCACTTCCTATTTTTGTATTTTCTTGGAT
ACCACCAGTCCGTTGGCTCTCCCAACTGGTGCTATTCTACCTTTGCATAC
ATAAATAGCTTGGGTTCTATCCATACATAACTAATACAGACTAATCCTAT
CTCACAATACAAATACCGGGACAGGGGGTAAGGCGAAG
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Coding sequence (CDS) from alignment at ch4:1056709..1058696-

>KJC3_004901-T1 ID=KJC3_004901-T1|Name=KJC3_004901-T1|organism=Aspergillus niger KJC3|type=CDS|length=6615bp|location=Sequence derived from alignment at ch4:1056709..1058696- (Aspergillus niger KJC3)
GAGCTCCCTGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTAC
AGCTTGCGATGTGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCT
GCAGTATGGACTCTGGCCATCCGCGTGCCAGATCGTATGCTGGCAAGGCT
CAACCCCGAGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCAC
TTCCACCTGTGCCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCA
GAGAAGCAGCATGTCTTTGCCATTCTCCAAACCCTGCCTGGCGAGAATCC
TTTCGACCTCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATT
CCATCATCGACTGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGC
ACTACAAGAGACAGCTTCTACGAACTAGGACCGGTAGTGTCCCGCCTGAA
AAAGGAGGCCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGA
ATGACACAGAAAGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCG
CAAGGGTGAGCTGGCGGAGCCAATGTTCATCTGGCTATCGGTATTGGATT
GGTAGGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAGTTCG
TGTTTTATACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACC
TTCACGGCAGAGATTATTCAAGATTTGACTACCTGATCCGCCCTCTCCCA
AAATATTCCCACGGCCGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTAT
CTTCTACATTCTCATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGT
TCAATATCACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACG
AAGGAAGAGCAAGAGACGGAACCATCGGACCGCCCTCCACGCAGGAAGAG
AAAGCACAGAAGGACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTG
ATATTGAAAGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTG
GATATTATTGGCTTGGAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCA
AGAGGATGGGAGACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTG
ATAGAGCACATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGAC
CACTTTTGTCCTTGATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTT
GCCAGGGCTATTCCGCCATTTCTATTGTGTGTATGTGTATATGCATGCTA
TATTGTCACAAAGCCGTTATGCAGAGCTCCCTGTTCGGTCTTTTCTCCTT
CGGGATGACTATCAGTTCCTTACAGCTTGCGATGTGGAATCTGTCAACGA
TTGAGAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTG
CCAGATCGTATGCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCAC
TTTCCGCACCATAACGTACCCACTTCCACCTGTGCCTCTCTCCCCTGAGG
CGGCGAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTC
CAAACCCTGCCTGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAA
CCTCCAACAGGTCCTGGGGTATTCCATCATCGACTGGTTTCTACCTCTCA
GACAAAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTA
GGACCGGTAGTGTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACC
CGAATCGCAGCCCACAACACAGAATGACACAGAAAGAAAACATAAGCGAA
GACGAAGTTCGCATAGACGATCGCAAGGGTGAGCTGGCGGAGCCAATGTT
CATCTGGCTATCGGTATTGGATTGGTAGGAGGCGTGGTTTCCGAAACATC
ATTCAAATTCTTTATACAGTTCGTGTTTTATACTCTGATATTTTGCGCAT
TCAGTTTGATAATATGCGCAACCTTCACGGCAGAGATTATTCAAGATTTG
ACTACCTGATCCGCCCTCTCCCAAAATATTCCCACGGCCGTCGAGTTGGC
GCTGGCATAGCCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTAT
TATAACCTATCTCCGGCTGTTGTTCAATATCACCCGCAACCCTGGCTTCT
TACCCCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAGACGGAACCATCG
GACCGCCCTCCACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGA
GAAGCCGGATAAGACGGACGTTGATATTGAAAGAGGTGCAGACGGCAACG
CCGACAGTGGTGCAATTCCTTTGGATATTATTGGCTTGGAGAGTTTCTAT
ACAAAAGATGTTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTC
GACATGTTCTCGCTACAAGCCTGATAGAGCACATCACTGTCGAGAGGTAG
ACAGGTGTGTGCTTAAGATGGACCACTTTTGTCCTTGATGGCGCGCCCAG
ATAGGCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTG
TGTGTATGTGTATATGCATGCTATATTGTCACAAAGCCGTTATGCAGAGC
TCCCTGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCT
TGCGATGTGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAG
TATGGACTCTGGCCATCCGCGTGCCAGATCGTATGCTGGCAAGGCTCAAC
CCCGAGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCC
ACCTGTGCCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGA
AGCAGCATGTCTTTGCCATTCTCCAAACCCTGCCTGGCGAGAATCCTTTC
GACCTCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCAT
CATCGACTGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTA
CAAGAGACAGCTTCTACGAACTAGGACCGGTAGTGTCCCGCCTGAAAAAG
GAGGCCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGA
CACAGAAAGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAG
GGTGAGCTGGCGGAGCCAATGTTCATCTGGCTATCGGTATTGGATTGGTA
GGAGGCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAGTTCGTGTT
TTATACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACCTTCA
CGGCAGAGATTATTCAAGATTTGACTACCTGATCCGCCCTCTCCCAAAAT
ATTCCCACGGCCGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTATCTTC
TACATTCTCATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGTTCAA
TATCACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGG
AAGAGCAAGAGACGGAACCATCGGACCGCCCTCCACGCAGGAAGAGAAAG
CACAGAAGGACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTGATAT
TGAAAGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATA
TTATTGGCTTGGAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCAAGAG
GATGGGAGACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTGATAG
AGCACATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACT
TTTGTCCTTGATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCA
GGGCTATTCCGCCATTTCTATTGTGTGTATGTGTATATGCATGCTATATT
GTCACAAAGCCGTTATGCAGAGCTCCCTGTTCGGTCTTTTCTCCTTCGGG
ATGACTATCAGTTCCTTACAGCTTGCGATGTGGAATCTGTCAACGATTGA
GAACCTGAATCGTCGGTCTGCAGTATGGACTCTGGCCATCCGCGTGCCAG
ATCGTATGCTGGCAAGGCTCAACCCCGAGTCACGATGGGCACCCACTTTC
CGCACCATAACGTACCCACTTCCACCTGTGCCTCTCTCCCCTGAGGCGGC
GAGAGATTACCAGCCACCAGAGAAGCAGCATGTCTTTGCCATTCTCCAAA
CCCTGCCTGGCGAGAATCCTTTCGACCTCGGCAGTCGCTTTAAGAACCTC
CAACAGGTCCTGGGGTATTCCATCATCGACTGGTTTCTACCTCTCAGACA
AAGTCCATGTGCAGACCGCACTACAAGAGACAGCTTCTACGAACTAGGAC
CGGTAGTGTCCCGCCTGAAAAAGGAGGCCGGATTAGACCCTCCACCCGAA
TCGCAGCCCACAACACAGAATGACACAGAAAGAAAACATAAGCGAAGACG
AAGTTCGCATAGACGATCGCAAGGGTGAGCTGGCGGAGCCAATGTTCATC
TGGCTATCGGTATTGGATTGGTAGGAGGCGTGGTTTCCGAAACATCATTC
AAATTCTTTATACAGTTCGTGTTTTATACTCTGATATTTTGCGCATTCAG
TTTGATAATATGCGCAACCTTCACGGCAGAGATTATTCAAGATTTGACTA
CCTGATCCGCCCTCTCCCAAAATATTCCCACGGCCGTCGAGTTGGCGCTG
GCATAGCCATTCTCGTTATCTTCTACATTCTCATTCTTGTCGTTATTATA
ACCTATCTCCGGCTGTTGTTCAATATCACCCGCAACCCTGGCTTCTTACC
CCGTGCTCCCGCACCGACGAAGGAAGAGCAAGAGACGGAACCATCGGACC
GCCCTCCACGCAGGAAGAGAAAGCACAGAAGGACACGGACAGCCGAGAAG
CCGGATAAGACGGACGTTGATATTGAAAGAGGTGCAGACGGCAACGCCGA
CAGTGGTGCAATTCCTTTGGATATTATTGGCTTGGAGAGTTTCTATACAA
AAGATGTTTTTGTTTGCCAAGAGGATGGGAGACCACTTTATTGCTCGACA
TGTTCTCGCTACAAGCCTGATAGAGCACATCACTGTCGAGAGGTAGACAG
GTGTGTGCTTAAGATGGACCACTTTTGTCCTTGATGGCGCGCCCAGATAG
GCGCGTCAATCTAGCGGTTGCCAGGGCTATTCCGCCATTTCTATTGTGTG
TATGTGTATATGCATGCTATATTGTCACAAAGCCGTTATGCAGAGCTCCC
TGTTCGGTCTTTTCTCCTTCGGGATGACTATCAGTTCCTTACAGCTTGCG
ATGTGGAATCTGTCAACGATTGAGAACCTGAATCGTCGGTCTGCAGTATG
GACTCTGGCCATCCGCGTGCCAGATCGTATGCTGGCAAGGCTCAACCCCG
AGTCACGATGGGCACCCACTTTCCGCACCATAACGTACCCACTTCCACCT
GTGCCTCTCTCCCCTGAGGCGGCGAGAGATTACCAGCCACCAGAGAAGCA
GCATGTCTTTGCCATTCTCCAAACCCTGCCTGGCGAGAATCCTTTCGACC
TCGGCAGTCGCTTTAAGAACCTCCAACAGGTCCTGGGGTATTCCATCATC
GACTGGTTTCTACCTCTCAGACAAAGTCCATGTGCAGACCGCACTACAAG
AGACAGCTTCTACGAACTAGGACCGGTAGTGTCCCGCCTGAAAAAGGAGG
CCGGATTAGACCCTCCACCCGAATCGCAGCCCACAACACAGAATGACACA
GAAAGAAAACATAAGCGAAGACGAAGTTCGCATAGACGATCGCAAGGGTG
AGCTGGCGGAGCCAATGTTCATCTGGCTATCGGTATTGGATTGGTAGGAG
GCGTGGTTTCCGAAACATCATTCAAATTCTTTATACAGTTCGTGTTTTAT
ACTCTGATATTTTGCGCATTCAGTTTGATAATATGCGCAACCTTCACGGC
AGAGATTATTCAAGATTTGACTACCTGATCCGCCCTCTCCCAAAATATTC
CCACGGCCGTCGAGTTGGCGCTGGCATAGCCATTCTCGTTATCTTCTACA
TTCTCATTCTTGTCGTTATTATAACCTATCTCCGGCTGTTGTTCAATATC
ACCCGCAACCCTGGCTTCTTACCCCGTGCTCCCGCACCGACGAAGGAAGA
GCAAGAGACGGAACCATCGGACCGCCCTCCACGCAGGAAGAGAAAGCACA
GAAGGACACGGACAGCCGAGAAGCCGGATAAGACGGACGTTGATATTGAA
AGAGGTGCAGACGGCAACGCCGACAGTGGTGCAATTCCTTTGGATATTAT
TGGCTTGGAGAGTTTCTATACAAAAGATGTTTTTGTTTGCCAAGAGGATG
GGAGACCACTTTATTGCTCGACATGTTCTCGCTACAAGCCTGATAGAGCA
CATCACTGTCGAGAGGTAGACAGGTGTGTGCTTAAGATGGACCACTTTTG
TCCTTGATGGCGCGCCCAGATAGGCGCGTCAATCTAGCGGTTGCCAGGGC
TATTCCGCCATTTCTATTGTGTGTATGTGTATATGCATGCTATATTGTCA
CAAAGCCGTTATGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016409palmitoyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PFA5KJC3_004901Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004901-T1KJC3_004901-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004901-T1.cdsKJC3_004901-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004901-T1.utr3p1KJC3_004901-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004901-T1.exon5KJC3_004901-T1.exon5Aspergillus niger KJC3exon
KJC3_004901-T1.exon4KJC3_004901-T1.exon4Aspergillus niger KJC3exon
KJC3_004901-T1.exon3KJC3_004901-T1.exon3Aspergillus niger KJC3exon
KJC3_004901-T1.exon2KJC3_004901-T1.exon2Aspergillus niger KJC3exon
KJC3_004901-T1.exon1KJC3_004901-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004901-T1.utr5p1KJC3_004901-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001594
DBxrefPFAM:PF01529
Productpalmitoyltransferase pfa5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1056709..1058696 -
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