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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1082742..1083955- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004906-T1 ID=KJC3_004906-T1|Name=KJC3_004906-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1214bp|location=Sequence derived from alignment at ch4:1082742..1083955- (Aspergillus niger KJC3)
CCTCCACACGGCAGCAACTCCGCACAAGTCCTTGATGATGCCAGCTGGAT
AGGAGTCTTCAAGTCGTCAGAGACATTCTAACATTTAACAACTCTATGGA
CCGTTGACAATGGCAGCCAAGTTTATCCCGCGCCAGGCTTTCCCCAACTA
TGGGTCCATCCCGAGGTCCTATTTCCTGGGCCACCATAGGGCCGGCCTGA
AGAAGATGCAGAACATGCTCTCTTCCATTGATTATGTAGTCGAGTGTCGA
GATTACAGAGTTCCTGTTACTTCTATCAACCCTATGTTCGAAGAAGCACT
GGGAAAGACACGGCGGTTGACCGTCTATACAAAGAGAGATCTGGGTGCTA
CAGCGGGATCGAATGCGCAGAAATTGGTGAGTGGAATACCACAAGTGAGA
GGAATGCACTATGATAATGATAGTGCTAACATATAATATACATACTTAGG
CAGAAAAAACCATTCGAACCTTCAATAAGAACGGCGCTACATTCTTCGTG
AGCTCGTCCTCTCGGGCAGATGTGGGCACAATCCTAAAACACCTGCGGGA
CGATGCAGAAGGACCGGACAAGCTTGTTGGATGCCGGGTGATGATTGTTG
GTATGCCTAATGTGGGCAAGTCGACGCTCATCAATCACCTGCGTAATCAG
GGTGTTGGGAAAGCTAAGGCGGTGCGGACCGGTGGCCAGCCAGGTATCAC
AAGAAAGATCGGGACACCCGTGAAGATCATCGAACGAGAAGGTGGCTCAC
ATGTCTACGTCTTGGATACCCCTGGAGTATTCATGCCATACGTGCCAGAC
GCGGAGAACATGTTAAAGCTAGCCCTGTGCGGCTGCGTCAAGGACTCGGT
CATTTCCCCGGTCACGCTAGCCGACTACCTATTATATCACATCAACCTGA
ATGACGCCGAGGTATATAAGCGATGGTCTGAGCCAACAAACGAGATTTTA
CCTCTGTTGAACAACTTTGCCCGACATGCTGGTCTCTTGGCCAAGGGCGG
AATTCCAAACACCGACCTGGCAGCACTACACTTCATACAAAAGTGGCGTG
CCGGCGACCTGGGCAGGTTTATGCTTGATGATCTGAAGGAGGAAGAGCGC
CGTCTGCAAGAAGGCGGAGAACGAGAGATACCCACCAGCTATACTCAGGC
CTTGAAGGCTGAGAAGCTGGGCAGAAAGCAACCCAAGCTGTAAATAAATA
AAGAATCATGTAAT back to topCoding sequence (CDS) from alignment at ch4:1082742..1083955- >KJC3_004906-T1 ID=KJC3_004906-T1|Name=KJC3_004906-T1|organism=Aspergillus niger KJC3|type=CDS|length=2022bp|location=Sequence derived from alignment at ch4:1082742..1083955- (Aspergillus niger KJC3)
GCAGAAAAAACCATTCGAACCTTCAATAAGAACGGCGCTACATTCTTCGT
GAGCTCGTCCTCTCGGGCAGATGTGGGCACAATCCTAAAACACCTGCGGG
ACGATGCAGAAGGACCGGACAAGCTTGTTGGATGCCGGGTGATGATTGTT
GGTATGCCTAATGTGGGCAAGTCGACGCTCATCAATCACCTGCGTAATCA
GGGTGTTGGGAAAGCTAAGGCGGTGCGGACCGGTGGCCAGCCAGGTATCA
CAAGAAAGATCGGGACACCCGTGAAGATCATCGAACGAGAAGGTGGCTCA
CATGTCTACGTCTTGGATACCCCTGGAGTATTCATGCCATACGTGCCAGA
CGCGGAGAACATGTTAAAGCTAGCCCTGTGCGGCTGCGTCAAGGACTCGG
TCATTTCCCCGGTCACGCTAGCCGACTACCTATTATATCACATCAACCTG
AATGACGCCGAGGTATATAAGCGATGGTCTGAGCCAACAAACGAGATTTT
ACCTCTGTTGAACAACTTTGCCCGACATGCTGGTCTCTTGGCCAAGGGCG
GAATTCCAAACACCGACCTGGCAGCACTACACTTCATACAAAAGTGGCGT
GCCGGCGACCTGGGCAGGTTTATGCTTGATGATCTGAAGGAGGAAGAGCG
CCGTCTGCAAGAAGGCGGAGAACGAGAGATACCCACCAGCTATACTCAGG
CCTTGAAGGCTGAGAAGCTGGGCAGAAAGCAACCCAAGCTGTAAATGGCA
GCCAAGTTTATCCCGCGCCAGGCTTTCCCCAACTATGGGTCCATCCCGAG
GTCCTATTTCCTGGGCCACCATAGGGCCGGCCTGAAGAAGATGCAGAACA
TGCTCTCTTCCATTGATTATGTAGTCGAGTGTCGAGATTACAGAGTTCCT
GTTACTTCTATCAACCCTATGTTCGAAGAAGCACTGGGAAAGACACGGCG
GTTGACCGTCTATACAAAGAGAGATCTGGGTGCTACAGCGGGATCGAATG
CGCAGAAATTGGCAGAAAAAACCATTCGAACCTTCAATAAGAACGGCGCT
ACATTCTTCGTGAGCTCGTCCTCTCGGGCAGATGTGGGCACAATCCTAAA
ACACCTGCGGGACGATGCAGAAGGACCGGACAAGCTTGTTGGATGCCGGG
TGATGATTGTTGGTATGCCTAATGTGGGCAAGTCGACGCTCATCAATCAC
CTGCGTAATCAGGGTGTTGGGAAAGCTAAGGCGGTGCGGACCGGTGGCCA
GCCAGGTATCACAAGAAAGATCGGGACACCCGTGAAGATCATCGAACGAG
AAGGTGGCTCACATGTCTACGTCTTGGATACCCCTGGAGTATTCATGCCA
TACGTGCCAGACGCGGAGAACATGTTAAAGCTAGCCCTGTGCGGCTGCGT
CAAGGACTCGGTCATTTCCCCGGTCACGCTAGCCGACTACCTATTATATC
ACATCAACCTGAATGACGCCGAGGTATATAAGCGATGGTCTGAGCCAACA
AACGAGATTTTACCTCTGTTGAACAACTTTGCCCGACATGCTGGTCTCTT
GGCCAAGGGCGGAATTCCAAACACCGACCTGGCAGCACTACACTTCATAC
AAAAGTGGCGTGCCGGCGACCTGGGCAGGTTTATGCTTGATGATCTGAAG
GAGGAAGAGCGCCGTCTGCAAGAAGGCGGAGAACGAGAGATACCCACCAG
CTATACTCAGGCCTTGAAGGCTGAGAAGCTGGGCAGAAAGCAACCCAAGC
TGTAAATGGCAGCCAAGTTTATCCCGCGCCAGGCTTTCCCCAACTATGGG
TCCATCCCGAGGTCCTATTTCCTGGGCCACCATAGGGCCGGCCTGAAGAA
GATGCAGAACATGCTCTCTTCCATTGATTATGTAGTCGAGTGTCGAGATT
ACAGAGTTCCTGTTACTTCTATCAACCCTATGTTCGAAGAAGCACTGGGA
AAGACACGGCGGTTGACCGTCTATACAAAGAGAGATCTGGGTGCTACAGC
GGGATCGAATGCGCAGAAATTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004906-T1.utr3p1 | KJC3_004906-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004906-T1.utr5p1 | KJC3_004906-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262WHU |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR006073 |
| DBxref | InterPro:IPR023179 |
| DBxref | InterPro:IPR016478 |
| DBxref | PFAM:PF01926 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1082742..1083955 - |
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