You are here

Home

KJC3_004912-T1, KJC3_004912-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004912-T1
Unique NameKJC3_004912-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1097600..1098385+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004912-T1 ID=KJC3_004912-T1|Name=KJC3_004912-T1|organism=Aspergillus niger KJC3|type=mRNA|length=786bp|location=Sequence derived from alignment at ch4:1097600..1098385+ (Aspergillus niger KJC3)
ATGAGTGGTTTCAATGCTATCTCTCCTCGGTACGCCGGCGCCTAGTCCAG
CCTCTGCTGTCAGCGGTTAACGTGCCAAAAACAGGAGGCCAGATCTGCGA
AGTCACCATATCCTACTCGACGCCGATGAGTTCGTGACCAAGTATGATAT
AGACGACTTGCGGGACGAGATCCGGACGGGCGCCCTCCTCGTCGATGATC
CCGATCATATCGGATGCTTTGAATGCTTGGCCGATGAGGAGACCAGGGCA
CTCGCATTGGAAAGGCAACCGATTCCTGTATTCTCGAGGACTTTATTCAA
CTGGCCTTGGCGATTTCCATGTGTGTGCACAATAGGAGGCCTTCTTTGGT
AAGAACCTCACAGCGTGAAGGGTAAACGCTGATGTTTTATACTAGGGGCT
TTACGGAACTCTTGTTTGAACAGCTGCTGCTTGACATGGATCCTTCAGAC
GCAGAACCTGGAACAGAAATAGCAAAACACATAGTAAAAATGATGGAAGG
ATGGAGCGTATGGATTGCCAAGATTGTCGGGCTCTGGTGCGCGATACCAC
TGCTCAGGCTACTTGGACGCCGCGGTGCAGGGTATGGCGTGGTAGGCCTG
AGGCTTGCCAGTCTTTTGGTATTGCTGGTATTTCCAAAGTTCTCAACCCC
AACGTATAAAGCGTTCCCTGCTACGACCAGTGGAATGTTCGCTTGTATCG
TGTCTATGTATATTGCGGAGACGGCTCCGGTCTCACAGCGCGGTAGTATT
TTCATCGCCTGGCAAGCGTTCGTATCACTCCTCTAG
back to top

Coding sequence (CDS) from alignment at ch4:1097600..1098385+

>KJC3_004912-T1 ID=KJC3_004912-T1|Name=KJC3_004912-T1|organism=Aspergillus niger KJC3|type=CDS|length=2052bp|location=Sequence derived from alignment at ch4:1097600..1098385+ (Aspergillus niger KJC3)
ATGAGTGGTTTCAATGCTATCTCTCCTCGGAGGCCAGATCTGCGAAGTCA
CCATATCCTACTCGACGCCGATGAGTTCGTGACCAAGTATGATATAGACG
ACTTGCGGGACGAGATCCGGACGGGCGCCCTCCTCGTCGATGATCCCGAT
CATATCGGATGCTTTGAATGCTTGGCCGATGAGGAGACCAGGGCACTCGC
ATTGGAAAGGCAACCGATTCCTGTATTCTCGAGGACTTTATTCAACTGGC
CTTGGCGATTTCCATGTGTGTGCACAATAGGAGGCCTTCTTTGGGGCTTT
ACGGAACTCTTGTTTGAACAGCTGCTGCTTGACATGGATCCTTCAGACGC
AGAACCTGGAACAGAAATAGCAAAACACATAGTAAAAATGATGGAAGGAT
GGAGCGTATGGATTGCCAAGATTGTCGGGCTCTGGTGCGCGATACCACTG
CTCAGGCTACTTGGACGCCGCGGTGCAGGGTATGGCGTGGTAGGCCTGAG
GCTTGCCAGTCTTTTGGTATTGCTGGTATTTCCAAAGTTCTCAACCCCAA
CGTATAAAGCGTTCCCTGCTACGACCAGTGGAATGTTCGCTTGTATCGTG
TCTATGTATATTGCGGAGACGGCTCCGGTCTCACAGCGCGGTAGTATTTT
CATCGCCTGGCAAGCGTTCGTATCACTCCTCTAGATGAGTGGTTTCAATG
CTATCTCTCCTCGGAGGCCAGATCTGCGAAGTCACCATATCCTACTCGAC
GCCGATGAGTTCGTGACCAAGTATGATATAGACGACTTGCGGGACGAGAT
CCGGACGGGCGCCCTCCTCGTCGATGATCCCGATCATATCGGATGCTTTG
AATGCTTGGCCGATGAGGAGACCAGGGCACTCGCATTGGAAAGGCAACCG
ATTCCTGTATTCTCGAGGACTTTATTCAACTGGCCTTGGCGATTTCCATG
TGTGTGCACAATAGGAGGCCTTCTTTGGGGCTTTACGGAACTCTTGTTTG
AACAGCTGCTGCTTGACATGGATCCTTCAGACGCAGAACCTGGAACAGAA
ATAGCAAAACACATAGTAAAAATGATGGAAGGATGGAGCGTATGGATTGC
CAAGATTGTCGGGCTCTGGTGCGCGATACCACTGCTCAGGCTACTTGGAC
GCCGCGGTGCAGGGTATGGCGTGGTAGGCCTGAGGCTTGCCAGTCTTTTG
GTATTGCTGGTATTTCCAAAGTTCTCAACCCCAACGTATAAAGCGTTCCC
TGCTACGACCAGTGGAATGTTCGCTTGTATCGTGTCTATGTATATTGCGG
AGACGGCTCCGGTCTCACAGCGCGGTAGTATTTTCATCGCCTGGCAAGCG
TTCGTATCACTCCTCTAGATGAGTGGTTTCAATGCTATCTCTCCTCGGAG
GCCAGATCTGCGAAGTCACCATATCCTACTCGACGCCGATGAGTTCGTGA
CCAAGTATGATATAGACGACTTGCGGGACGAGATCCGGACGGGCGCCCTC
CTCGTCGATGATCCCGATCATATCGGATGCTTTGAATGCTTGGCCGATGA
GGAGACCAGGGCACTCGCATTGGAAAGGCAACCGATTCCTGTATTCTCGA
GGACTTTATTCAACTGGCCTTGGCGATTTCCATGTGTGTGCACAATAGGA
GGCCTTCTTTGGGGCTTTACGGAACTCTTGTTTGAACAGCTGCTGCTTGA
CATGGATCCTTCAGACGCAGAACCTGGAACAGAAATAGCAAAACACATAG
TAAAAATGATGGAAGGATGGAGCGTATGGATTGCCAAGATTGTCGGGCTC
TGGTGCGCGATACCACTGCTCAGGCTACTTGGACGCCGCGGTGCAGGGTA
TGGCGTGGTAGGCCTGAGGCTTGCCAGTCTTTTGGTATTGCTGGTATTTC
CAAAGTTCTCAACCCCAACGTATAAAGCGTTCCCTGCTACGACCAGTGGA
ATGTTCGCTTGTATCGTGTCTATGTATATTGCGGAGACGGCTCCGGTCTC
ACAGCGCGGTAGTATTTTCATCGCCTGGCAAGCGTTCGTATCACTCCTCT
AG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004912KJC3_004912Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004912-T1.exon1KJC3_004912-T1.exon1Aspergillus niger KJC3exon
KJC3_004912-T1.exon2KJC3_004912-T1.exon2Aspergillus niger KJC3exon
KJC3_004912-T1.exon3KJC3_004912-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004912-T1.cdsKJC3_004912-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004912-T1KJC3_004912-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1097600..1098385 +
Powered by Drupal