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KJC3_004916-T1, KJC3_004916-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004916-T1
Unique NameKJC3_004916-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1107122..1107870+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004916-T1 ID=KJC3_004916-T1|Name=KJC3_004916-T1|organism=Aspergillus niger KJC3|type=mRNA|length=749bp|location=Sequence derived from alignment at ch4:1107122..1107870+ (Aspergillus niger KJC3)
ATGCCTGTTATCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAAT
TGTTTGCGGTGCGGTATGTATTTCAATATGATCCATATAGATTATTCTAC
TCTATCTCGATTTATACGCTAACATATGGACTTGAATAGGTCGTCGCCGG
TATCATTGGTCACTACCTTGCCCAATACAGCGGTGACGCATGGCCTGAAG
CCCGCTGGATCTACACCGAAGTCGTCGCCGGTTTATCAATCCTCCTTGGC
CTGATATGGCTCATACCATTTTCCTCTGGATTTTTCTCCTGGCCATGTAC
GTTGTCGCATTTCCCCCCTCTACTCCTCCGCAATTGCTGACTCGGCCCCC
CTTTCCCGCAGTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCG
GTATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCAC
TGGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGA
AGCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGG
TATGTTCTCATAACCCCCTGCTGGCTATTGATGCATACTGACGATCGTGA
TACAGGGTCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCT
ACCTAGTAAGTCACACCATCACCGTCTTTGTGAGAACCTCGACACTAATA
AGCTCGCATCAGTGGTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAA
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Coding sequence (CDS) from alignment at ch4:1107122..1107870+

>KJC3_004916-T1 ID=KJC3_004916-T1|Name=KJC3_004916-T1|organism=Aspergillus niger KJC3|type=CDS|length=2475bp|location=Sequence derived from alignment at ch4:1107122..1107870+ (Aspergillus niger KJC3)
ATGCCTGTTATCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAAT
TGTTTGCGGTGCGGTCGTCGCCGGTATCATTGGTCACTACCTTGCCCAAT
ACAGCGGTGACGCATGGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTC
GCCGGTTTATCAATCCTCCTTGGCCTGATATGGCTCATACCATTTTCCTC
TGGATTTTTCTCCTGGCCATTTGACGTCATCATCTCCCTTGCATGGTTTG
CCGCATTCGGTATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGT
ATCTGGCACTGGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAA
GGCCGCTGAAGCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGG
CGCTTGTGGGTCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCC
CCTACCTATGGTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCC
TGTTATCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTT
GCGGTGCGGTCGTCGCCGGTATCATTGGTCACTACCTTGCCCAATACAGC
GGTGACGCATGGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGG
TTTATCAATCCTCCTTGGCCTGATATGGCTCATACCATTTTCCTCTGGAT
TTTTCTCCTGGCCATTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCA
TTCGGTATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTG
GCACTGGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCG
CTGAAGCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTT
GTGGGTCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTAC
CTATGGTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCCTGTTA
TCTCCCGACTAATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTTGCGGT
GCGGTCGTCGCCGGTATCATTGGTCACTACCTTGCCCAATACAGCGGTGA
CGCATGGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGGTTTAT
CAATCCTCCTTGGCCTGATATGGCTCATACCATTTTCCTCTGGATTTTTC
TCCTGGCCATTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCGG
TATCCTTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCACT
GGGGTGGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGAA
GCGTTCAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGGG
TCTTTGGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTACCTATG
GTCGCCGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCCTGTTATCTCC
CGACTAATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTTGCGGTGCGGT
CGTCGCCGGTATCATTGGTCACTACCTTGCCCAATACAGCGGTGACGCAT
GGCCTGAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGGTTTATCAATC
CTCCTTGGCCTGATATGGCTCATACCATTTTCCTCTGGATTTTTCTCCTG
GCCATTTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCGGTATCC
TTGTCAACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCACTGGGGT
GGTCTCTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGAAGCGTT
CAGCTTCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGGGTCTTT
GGTTCACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTACCTATGGTCGC
CGTCGCTTCTTCGGTCGCTCCGCCGTGTAAATGCCTGTTATCTCCCGACT
AATCTCGATCGTCTTCCGCGTCGCGCAAATTGTTTGCGGTGCGGTCGTCG
CCGGTATCATTGGTCACTACCTTGCCCAATACAGCGGTGACGCATGGCCT
GAAGCCCGCTGGATCTACACCGAAGTCGTCGCCGGTTTATCAATCCTCCT
TGGCCTGATATGGCTCATACCATTTTCCTCTGGATTTTTCTCCTGGCCAT
TTGACGTCATCATCTCCCTTGCATGGTTTGCCGCATTCGGTATCCTTGTC
AACGCCATTCACAAGTTGAGCTGCGGCAGTATCTGGCACTGGGGTGGTCT
CTACCGCAACAATACTTGCAGTCGCTGGAAGGCCGCTGAAGCGTTCAGCT
TCATCTCGGCTATTGTCTGGCTTGCCTCGGCGCTTGTGGGTCTTTGGTTC
ACTTTCCGTGTTAGGAAGGAAAGCACTGCCCCTACCTATGGTCGCCGTCG
CTTCTTCGGTCGCTCCGCCGTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004916KJC3_004916Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004916-T1KJC3_004916-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004916-T1.exon1KJC3_004916-T1.exon1Aspergillus niger KJC3exon
KJC3_004916-T1.exon2KJC3_004916-T1.exon2Aspergillus niger KJC3exon
KJC3_004916-T1.exon3KJC3_004916-T1.exon3Aspergillus niger KJC3exon
KJC3_004916-T1.exon4KJC3_004916-T1.exon4Aspergillus niger KJC3exon
KJC3_004916-T1.exon5KJC3_004916-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004916-T1.cdsKJC3_004916-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR008253
DBxrefPFAM:PF01284
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1107122..1107870 +
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