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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1108591..1111028- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004917-T1 ID=KJC3_004917-T1|Name=KJC3_004917-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2438bp|location=Sequence derived from alignment at ch4:1108591..1111028- (Aspergillus niger KJC3)
GCTCCCTTGATCTGGGGTATATATTCTATTCCCAGACTTCATATGTAAGC
GACCCTGGGGAGCGGCAACTCCAAAGGACAGAGAAGTAATCAAACCCGCA
GTTTCAAGCATGACTTCTTTTATATTGAGCGACGTGCCGACGTCGCCCTC
TCCAGTGCCAACATTTATCACGCCGAAGCAGTGCGTCACTCATCTTAAGC
TTCTCTCAGCATTTGCCGAGTTGCGAGATGTAATCAGCAACAATGACGGA
CTCTTCGGGCTTTACGACCAAGGCGAACATCCAGAGAATGTTGCTCGAGA
CAATTATCAAGACTTAGTCAGAGAGAAGCGCTGGGCTGTATATGTTGCAC
GGGCTGTGAAACGATACACGGATTGGTGGTTCCGATGTCTCCCTAGCCAG
AAGCCGCTCCCCACAATGGCAGATATCCGCAAGGATGCATATGCCAAAGT
CGTTAAGCCTAAGAAAATAGTGCAGTGGCACGAAGATGTCCTTCCACCTC
TGGGTACGTGACTCTTATTTCATTATCAGGAAACTCTGCTTGCTAATGTG
AGACGTGGTGTAGATGTGCTTATGGTGTGGCACTCGCATATGCTGAACCC
ACGCAAGTATCTCGAGGACTGCATCCGGTATGGCAAGATGTGTGTTTGGG
GTGCACGTTTCCCCTGGGAGCTTGTTGATCGTCAAATCGATGGCGCCACA
TTTGAATACACAACAACTGGGAAAGCGCGTCGGTATTTTGAGTCTCAGAT
CAATTCTAGTTGGGATAACTTGTTTGATCCGCCCACTACCACTGTTCCAT
GTCCAAACTGCGGCATCCAGATCGTTGTCGAATGGACAATGGGCAAAGAC
TTGGCAGATGTCAAGCTTCCCTTTGAGGATTTTACAGGCTTAGCTGACAA
AGGCTTCCGTGCTACCTGCCACAATTGTCAATACCTGGTTGACCATGACC
GGCTGAAGCTGGCAAAGTGGCGTCAAGATGTGCGGTCACTGCTGGAACAG
AATCGGCCTATGCCCGGGTGCTTCTACAACTTACGTGGCGTCCCATTCCC
AGTGTCACAGAGTTGGAAAGACGCGGCGTTTTTATATCCAAGCCAGCTTA
TCCGGGTTGTGGCCGACGATATACTGGAGTATACCAATCCTAAGACCAAT
AAATGCCACAATATTGCCGCCGTGCGCAATTACTTAAATAAAAGACTCCT
AGAACGCAGAGTCCTGCAGCTGGCACACGACTCAATAATCTCGAAGGTTC
GACCCGTTCGGACTGAGAAAATATGCATCCGTCGGATGATTTCTCGATAC
TGGGATAATTTCGGTCCATTTTCCCTGGACTTGCTCGGCGCTGTCATCAG
ACAAGGCAAGTTTATCCAGCAAATGGACCGTACAAACTGGATTAGGGCCC
CGACTCTCCACGCCACCATCAGCCGATCAATCAAGAAGTACAGTGTCTTC
TTTGGGATCATGGCTGATAACCCCAAACAAATGGCCGTACCAACATTAGA
TGTGGATTTAGCATGGCACACACATCAGCTTTCTCCCATGCAATACTATA
ACTGTAGTGTGGGCTTAGCCAGTAGCCCATTGCGGTTCATGGATCACAAT
GACAAGGTTGATGAGGTAGACCTGACCATTGGGTTCGAATGGACTTGCAA
AGCATATCGTGAGGTTACCGATGGGGAGATCTATAGCGAATGCGTCTGTT
GGTTCTGCGAGGCGGTCCGCTACCCCGATCTCTACGGTCATTTCCGCTCA
TCTCTATTGTGGCTTTCCGATGCTCGCAAAGCTGTTGAGGATTTGCGCAG
ACAGCATGATCATGCCTCTAAGTCTGACAATGGACCGCATATCTCCGTTC
ACAGTGCTGTCCGTCCTCAGAAGATATCTGAGGTCGACCGAATCAAGAGA
GAAACCAGAGCCCTGCAGCTTCTAGAAGCTTACAGAAAGTCTCTCAGGCG
AGCTAAGAAGCATTCCCGTTCTTCCAAGGCGCTTGTATCTGCCATTGCAG
CCGTCAATTCTGTTGTTTTGCCAACTAGTCCGCCCACGGACACAGTTATA
TCACAGGACGAGATAAGTACGTCGTTCGGTGAAGATGAGGTCAACCCTGA
GAGAAAAGATCATGTCCAAAACATCAAGGATGTCTTCGATGTCATCGACC
ATGTCGTAGACCTACTTGGCCAGCTATTTCCTAACCATCCCCATAGTATG
GATGGTTCGCTTAATGGGCAATGGAATTGTATTTCAGGGACGTGCGGTTC
TTCTACCGCGGGTGGGAATTGTGTCTCTTGCGGGAATGCATCTGCTTGTG
GGGCTTCTGCAGGGTGCGGTGGTGGCGCCGGAGGATGTGGTGGAGGAGGA
GGAGGAGGAGGAGGAGGGGGAGGGAGCTCAGGATGCGGTAAGTTTTTTCT
TGTCTTCATTTGAGGACTAGTCTAATGATGCATCATGC back to topCoding sequence (CDS) from alignment at ch4:1108591..1111028- >KJC3_004917-T1 ID=KJC3_004917-T1|Name=KJC3_004917-T1|organism=Aspergillus niger KJC3|type=CDS|length=4488bp|location=Sequence derived from alignment at ch4:1108591..1111028- (Aspergillus niger KJC3)
ATGTGCTTATGGTGTGGCACTCGCATATGCTGAACCCACGCAAGTATCTC
GAGGACTGCATCCGGTATGGCAAGATGTGTGTTTGGGGTGCACGTTTCCC
CTGGGAGCTTGTTGATCGTCAAATCGATGGCGCCACATTTGAATACACAA
CAACTGGGAAAGCGCGTCGGTATTTTGAGTCTCAGATCAATTCTAGTTGG
GATAACTTGTTTGATCCGCCCACTACCACTGTTCCATGTCCAAACTGCGG
CATCCAGATCGTTGTCGAATGGACAATGGGCAAAGACTTGGCAGATGTCA
AGCTTCCCTTTGAGGATTTTACAGGCTTAGCTGACAAAGGCTTCCGTGCT
ACCTGCCACAATTGTCAATACCTGGTTGACCATGACCGGCTGAAGCTGGC
AAAGTGGCGTCAAGATGTGCGGTCACTGCTGGAACAGAATCGGCCTATGC
CCGGGTGCTTCTACAACTTACGTGGCGTCCCATTCCCAGTGTCACAGAGT
TGGAAAGACGCGGCGTTTTTATATCCAAGCCAGCTTATCCGGGTTGTGGC
CGACGATATACTGGAGTATACCAATCCTAAGACCAATAAATGCCACAATA
TTGCCGCCGTGCGCAATTACTTAAATAAAAGACTCCTAGAACGCAGAGTC
CTGCAGCTGGCACACGACTCAATAATCTCGAAGGTTCGACCCGTTCGGAC
TGAGAAAATATGCATCCGTCGGATGATTTCTCGATACTGGGATAATTTCG
GTCCATTTTCCCTGGACTTGCTCGGCGCTGTCATCAGACAAGGCAAGTTT
ATCCAGCAAATGGACCGTACAAACTGGATTAGGGCCCCGACTCTCCACGC
CACCATCAGCCGATCAATCAAGAAGTACAGTGTCTTCTTTGGGATCATGG
CTGATAACCCCAAACAAATGGCCGTACCAACATTAGATGTGGATTTAGCA
TGGCACACACATCAGCTTTCTCCCATGCAATACTATAACTGTAGTGTGGG
CTTAGCCAGTAGCCCATTGCGGTTCATGGATCACAATGACAAGGTTGATG
AGGTAGACCTGACCATTGGGTTCGAATGGACTTGCAAAGCATATCGTGAG
GTTACCGATGGGGAGATCTATAGCGAATGCGTCTGTTGGTTCTGCGAGGC
GGTCCGCTACCCCGATCTCTACGGTCATTTCCGCTCATCTCTATTGTGGC
TTTCCGATGCTCGCAAAGCTGTTGAGGATTTGCGCAGACAGCATGATCAT
GCCTCTAAGTCTGACAATGGACCGCATATCTCCGTTCACAGTGCTGTCCG
TCCTCAGAAGATATCTGAGGTCGACCGAATCAAGAGAGAAACCAGAGCCC
TGCAGCTTCTAGAAGCTTACAGAAAGTCTCTCAGGCGAGCTAAGAAGCAT
TCCCGTTCTTCCAAGGCGCTTGTATCTGCCATTGCAGCCGTCAATTCTGT
TGTTTTGCCAACTAGTCCGCCCACGGACACAGTTATATCACAGGACGAGA
TAAGTACGTCGTTCGGTGAAGATGAGGTCAACCCTGAGAGAAAAGATCAT
GTCCAAAACATCAAGGATGTCTTCGATGTCATCGACCATGTCGTAGACCT
ACTTGGCCAGCTATTTCCTAACCATCCCCATAGTATGGATGGTTCGCTTA
ATGGGCAATGGAATTGTATTTCAGGGACGTGCGGTTCTTCTACCGCGGGT
GGGAATTGTGTCTCTTGCGGGAATGCATCTGCTTGTGGGGCTTCTGCAGG
GTGCGGTGGTGGCGCCGGAGGATGTGGTGGAGGAGGAGGAGGAGGAGGAG
GAGGGGGAGGGAGCTCAGGATGCGGTAAGTTTTTTCTTGTCTTCATTTGA
ATGACTTCTTTTATATTGAGCGACGTGCCGACGTCGCCCTCTCCAGTGCC
AACATTTATCACGCCGAAGCAGTGCGTCACTCATCTTAAGCTTCTCTCAG
CATTTGCCGAGTTGCGAGATGTAATCAGCAACAATGACGGACTCTTCGGG
CTTTACGACCAAGGCGAACATCCAGAGAATGTTGCTCGAGACAATTATCA
AGACTTAGTCAGAGAGAAGCGCTGGGCTGTATATGTTGCACGGGCTGTGA
AACGATACACGGATTGGTGGTTCCGATGTCTCCCTAGCCAGAAGCCGCTC
CCCACAATGGCAGATATCCGCAAGGATGCATATGCCAAAGTCGTTAAGCC
TAAGAAAATAGTGCAGTGGCACGAAGATGTCCTTCCACCTCTGGATGTGC
TTATGGTGTGGCACTCGCATATGCTGAACCCACGCAAGTATCTCGAGGAC
TGCATCCGGTATGGCAAGATGTGTGTTTGGGGTGCACGTTTCCCCTGGGA
GCTTGTTGATCGTCAAATCGATGGCGCCACATTTGAATACACAACAACTG
GGAAAGCGCGTCGGTATTTTGAGTCTCAGATCAATTCTAGTTGGGATAAC
TTGTTTGATCCGCCCACTACCACTGTTCCATGTCCAAACTGCGGCATCCA
GATCGTTGTCGAATGGACAATGGGCAAAGACTTGGCAGATGTCAAGCTTC
CCTTTGAGGATTTTACAGGCTTAGCTGACAAAGGCTTCCGTGCTACCTGC
CACAATTGTCAATACCTGGTTGACCATGACCGGCTGAAGCTGGCAAAGTG
GCGTCAAGATGTGCGGTCACTGCTGGAACAGAATCGGCCTATGCCCGGGT
GCTTCTACAACTTACGTGGCGTCCCATTCCCAGTGTCACAGAGTTGGAAA
GACGCGGCGTTTTTATATCCAAGCCAGCTTATCCGGGTTGTGGCCGACGA
TATACTGGAGTATACCAATCCTAAGACCAATAAATGCCACAATATTGCCG
CCGTGCGCAATTACTTAAATAAAAGACTCCTAGAACGCAGAGTCCTGCAG
CTGGCACACGACTCAATAATCTCGAAGGTTCGACCCGTTCGGACTGAGAA
AATATGCATCCGTCGGATGATTTCTCGATACTGGGATAATTTCGGTCCAT
TTTCCCTGGACTTGCTCGGCGCTGTCATCAGACAAGGCAAGTTTATCCAG
CAAATGGACCGTACAAACTGGATTAGGGCCCCGACTCTCCACGCCACCAT
CAGCCGATCAATCAAGAAGTACAGTGTCTTCTTTGGGATCATGGCTGATA
ACCCCAAACAAATGGCCGTACCAACATTAGATGTGGATTTAGCATGGCAC
ACACATCAGCTTTCTCCCATGCAATACTATAACTGTAGTGTGGGCTTAGC
CAGTAGCCCATTGCGGTTCATGGATCACAATGACAAGGTTGATGAGGTAG
ACCTGACCATTGGGTTCGAATGGACTTGCAAAGCATATCGTGAGGTTACC
GATGGGGAGATCTATAGCGAATGCGTCTGTTGGTTCTGCGAGGCGGTCCG
CTACCCCGATCTCTACGGTCATTTCCGCTCATCTCTATTGTGGCTTTCCG
ATGCTCGCAAAGCTGTTGAGGATTTGCGCAGACAGCATGATCATGCCTCT
AAGTCTGACAATGGACCGCATATCTCCGTTCACAGTGCTGTCCGTCCTCA
GAAGATATCTGAGGTCGACCGAATCAAGAGAGAAACCAGAGCCCTGCAGC
TTCTAGAAGCTTACAGAAAGTCTCTCAGGCGAGCTAAGAAGCATTCCCGT
TCTTCCAAGGCGCTTGTATCTGCCATTGCAGCCGTCAATTCTGTTGTTTT
GCCAACTAGTCCGCCCACGGACACAGTTATATCACAGGACGAGATAAGTA
CGTCGTTCGGTGAAGATGAGGTCAACCCTGAGAGAAAAGATCATGTCCAA
AACATCAAGGATGTCTTCGATGTCATCGACCATGTCGTAGACCTACTTGG
CCAGCTATTTCCTAACCATCCCCATAGTATGGATGGTTCGCTTAATGGGC
AATGGAATTGTATTTCAGGGACGTGCGGTTCTTCTACCGCGGGTGGGAAT
TGTGTCTCTTGCGGGAATGCATCTGCTTGTGGGGCTTCTGCAGGGTGCGG
TGGTGGCGCCGGAGGATGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGGG
GAGGGAGCTCAGGATGCGGTAAGTTTTTTCTTGTCTTCATTTGAATGACT
TCTTTTATATTGAGCGACGTGCCGACGTCGCCCTCTCCAGTGCCAACATT
TATCACGCCGAAGCAGTGCGTCACTCATCTTAAGCTTCTCTCAGCATTTG
CCGAGTTGCGAGATGTAATCAGCAACAATGACGGACTCTTCGGGCTTTAC
GACCAAGGCGAACATCCAGAGAATGTTGCTCGAGACAATTATCAAGACTT
AGTCAGAGAGAAGCGCTGGGCTGTATATGTTGCACGGGCTGTGAAACGAT
ACACGGATTGGTGGTTCCGATGTCTCCCTAGCCAGAAGCCGCTCCCCACA
ATGGCAGATATCCGCAAGGATGCATATGCCAAAGTCGTTAAGCCTAAGAA
AATAGTGCAGTGGCACGAAGATGTCCTTCCACCTCTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004917-T1.utr3p1 | KJC3_004917-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004917-T1.utr5p1 | KJC3_004917-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009836 |
| DBxref | PFAM:PF07173 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1108591..1111028 - |
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