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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1111650..1114037+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004918-T1 ID=KJC3_004918-T1|Name=KJC3_004918-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2388bp|location=Sequence derived from alignment at ch4:1111650..1114037+ (Aspergillus niger KJC3)
TCCTGGCATACTTGAATGGTAATGGTCGTCTCTTATTGACGCCTTCCAGG
TAGGTTATAGTTGTTCTGGTATTACTCTTCAAGATCAATACTCGTGGGAC
CAAGGGTTCTATACTAAATGTCTTGGTTTTACCGGATTCAGTCCATGATG
ACTAACTGCTGAGCTTCCGAAGCAACCGTTCGTTCATTCTTTGAATTGGA
TCGAATTCTCCCGCGGTTCTTTCTCCCACTACCCATGGAGCAATAATGCG
CCCGGAGCACCCTTCAAGAAGCAGGTCAAGATCTCCATCTTCCTCCTTTG
GAAAGACATCCCAAGACTACCCGTTGGCAGTCTTTGATCCGAATGAGAAT
GACTCCGAAAGCAGTCAGTTCATAACGGTTGGGCGGGAAAGTACCGACTC
CGCCCGGCCCGATCGGCGAGAGAACACGAATGAGCCTTTATTGCCAACTT
CAACTCATCATCCCCGTCGCATAGCGGCGGCGAGGCCATTTACATGTACG
CTTTCTGGGATTCGCGCGTGGATTAAAGGCCCGCCACATCCACACCGGTA
TCAGATCACTCCATGGTTGCAGCGCTGGCAGACGGCACCGGGCCGCCTTG
TGGAGCGCTATTTTCCGAGCACTCGTGCCAAAGTTTGGCTTTTGTTGGCC
TGCATATGCACCTGGGGTGTCATATTTCTCTCCATCCTGCATTCCTCTGT
AGCTGGCCAGCAGGTATCCGGATACGGAGTGCCTGTCAAGCTATCGTGTA
ACGCTAGACTATGGTATGTGACCTGTGCTCTGGCGGTTCCAAACTGTTCC
CAAATTAATCTCTTTATGCAGGCCAAACTCGACCGACTGCGGTCTGAATG
GTGACTCCTGTCGCCCTTTTGACGACGGGGCATTTGCCTTTCGCTGTCCC
GCAAGTTGCGCAGATGCGATGCTGCTAGAGCCGTATTTTGTAGGCCCCGA
GGAGTACAACTATCGTCCTCTTGTCATCGGGGGCACTGCAGAAGGTGATA
GTACTGAGGGTATCTACCGCGGAGACTCAGCCATCTGTCCTGCGGCACTA
CACGCTGGTCTGATAGATAGCCAAAAAGGCGGCTGTGGTGTCTTGCGTCG
AACGGGTGAAAGAACCAATTTTCCATCAGCGGCAAGTAACGGCATCGAAA
GCATTGGATACGCTTCATACTTCCCACTCTCCTTCACCTTTAGCGGAGAG
CCATCTGAAACAAGCTGCCAGGACCTCCGCTGGCCACTTTTCACCTTCTC
AGTCGTTGTAACAACCCTGCTATCCCTATTTATCACGTCTCCCGCAGCAT
TCTATGCCTCTATCTACTTCATCGTCTACTTCCAGGTCGCTCTCTCCTCC
GACCCGCCTTACTCCCCAGACTACTATGAAGTCGTATCTACAGCCCTAGG
CCGCTTCCTCCCCTGCGCCTTCGTCGGCTTTGCAATTTACTACTTTTGCG
TCCGCAAAACTCTAACAGACCTCACCGCACACTGGGACAAGACCGTCCTC
TGGCTCGGCAGCTGCTGGGTCGGCGCCCTCAACACCGACACATTCGACAA
AATTCCCATCTCACGCCTCACACCTCACGACATCCAACAACAACCAGGCG
CCATCCCCGCCTTGATCATCATCATTGGCCTCCTCGTCGCCATTGTTCTC
ACCCAAGCCATCGCTTTCCGCAGAGAAGGCCGCATGCCCAAAATGCTTCT
CCTCTATGGAATCATGGCCTGCGGCGTGATCGCCCTGATGCTCGTCCCGC
ACATGAACCTTCGCATTCATCACTACGTCCTCAGCCTCCTCTTCTTACCG
GGGACAACACTCCAAACGCGCCCCAGTCTCCTATACCAAGGCCTCCTGGT
AGGACTGTTCATCAACGGCATCGCCCGCTGGGGCTTCGATAGCATTCTGC
AGACGTCTGCTGCATTGCTTGACGGCGCGCAGCTGGGCAGCGTCCTGCCT
GTCATTGGGGCTCCTGTTATGATGTCACGTCAGAACATCATGTTCAATTT
CAATGATGTAGACAAAGATGCAGATGGGATTAGCGTGCTTGTTAATGATG
TCGAACGCTTCCGGGCGTTCAAGTCTGATGATGGGATGTTGGAGTCGTTT
AATTGGACCCGCCATTTGGAAGGTGAGCCGGAGTATTTCCGGTTTGGGTA
CATTAAAGTTAATGCGTTGGGAGGAATTTGGTATGAGGATTTTACGAGGC
CGGGGACTTGGGAAGGTGAGGGACAGTGGATTCCTCTTGACTCTGATTCT
CGGTCGTCTATGGAATCTATCTAGTTGAGTACTATTTAAGTGGATATATT
GGTGGGATAAGCATATATGGATTTGGTATAGAGATGAATTCAGGCATTTG
GACTATATAGAAAGCAAAGATATCTTGGTAACCATGAG back to topCoding sequence (CDS) from alignment at ch4:1111650..1114037+ >KJC3_004918-T1 ID=KJC3_004918-T1|Name=KJC3_004918-T1|organism=Aspergillus niger KJC3|type=CDS|length=3942bp|location=Sequence derived from alignment at ch4:1111650..1114037+ (Aspergillus niger KJC3)
ATGCGCCCGGAGCACCCTTCAAGAAGCAGGTCAAGATCTCCATCTTCCTC
CTTTGGAAAGACATCCCAAGACTACCCGTTGGCAGTCTTTGATCCGAATG
AGAATGACTCCGAAAGCAGTCAGTTCATAACGGTTGGGCGGGAAAGTACC
GACTCCGCCCGGCCCGATCGGCGAGAGAACACGAATGAGCCTTTATTGCC
AACTTCAACTCATCATCCCCGTCGCATAGCGGCGGCGAGGCCATTTACAT
GTACGCTTTCTGGGATTCGCGCGTGGATTAAAGGCCCGCCACATCCACAC
CGGTATCAGATCACTCCATGGTTGCAGCGCTGGCAGACGGCACCGGGCCG
CCTTGTGGAGCGCTATTTTCCGAGCACTCGTGCCAAAGTTTGGCTTTTGT
TGGCCTGCATATGCACCTGGGGTGTCATATTTCTCTCCATCCTGCATTCC
TCTGTAGCTGGCCAGCAGGTATCCGGATACGGAGTGCCTGTCAAGCTATC
GTGTAACGCTAGACTATGGCCAAACTCGACCGACTGCGGTCTGAATGGTG
ACTCCTGTCGCCCTTTTGACGACGGGGCATTTGCCTTTCGCTGTCCCGCA
AGTTGCGCAGATGCGATGCTGCTAGAGCCGTATTTTGTAGGCCCCGAGGA
GTACAACTATCGTCCTCTTGTCATCGGGGGCACTGCAGAAGGTGATAGTA
CTGAGGGTATCTACCGCGGAGACTCAGCCATCTGTCCTGCGGCACTACAC
GCTGGTCTGATAGATAGCCAAAAAGGCGGCTGTGGTGTCTTGCGTCGAAC
GGGTGAAAGAACCAATTTTCCATCAGCGGCAAGTAACGGCATCGAAAGCA
TTGGATACGCTTCATACTTCCCACTCTCCTTCACCTTTAGCGGAGAGCCA
TCTGAAACAAGCTGCCAGGACCTCCGCTGGCCACTTTTCACCTTCTCAGT
CGTTGTAACAACCCTGCTATCCCTATTTATCACGTCTCCCGCAGCATTCT
ATGCCTCTATCTACTTCATCGTCTACTTCCAGGTCGCTCTCTCCTCCGAC
CCGCCTTACTCCCCAGACTACTATGAAGTCGTATCTACAGCCCTAGGCCG
CTTCCTCCCCTGCGCCTTCGTCGGCTTTGCAATTTACTACTTTTGCGTCC
GCAAAACTCTAACAGACCTCACCGCACACTGGGACAAGACCGTCCTCTGG
CTCGGCAGCTGCTGGGTCGGCGCCCTCAACACCGACACATTCGACAAAAT
TCCCATCTCACGCCTCACACCTCACGACATCCAACAACAACCAGGCGCCA
TCCCCGCCTTGATCATCATCATTGGCCTCCTCGTCGCCATTGTTCTCACC
CAAGCCATCGCTTTCCGCAGAGAAGGCCGCATGCCCAAAATGCTTCTCCT
CTATGGAATCATGGCCTGCGGCGTGATCGCCCTGATGCTCGTCCCGCACA
TGAACCTTCGCATTCATCACTACGTCCTCAGCCTCCTCTTCTTACCGGGG
ACAACACTCCAAACGCGCCCCAGTCTCCTATACCAAGGCCTCCTGGTAGG
ACTGTTCATCAACGGCATCGCCCGCTGGGGCTTCGATAGCATTCTGCAGA
CGTCTGCTGCATTGCTTGACGGCGCGCAGCTGGGCAGCGTCCTGCCTGTC
ATTGGGGCTCCTGTTATGATGTCACGTCAGAACATCATGTTCAATTTCAA
TGATGTAGACAAAGATGCAGATGGGATTAGCGTGCTTGTTAATGATGTCG
AACGCTTCCGGGCGTTCAAGTCTGATGATGGGATGTTGGAGTCGTTTAAT
TGGACCCGCCATTTGGAAGGTGAGCCGGAGTATTTCCGGTTTGGGTACAT
TAAAGTTAATGCGTTGGGAGGAATTTGGTATGAGGATTTTACGAGGCCGG
GGACTTGGGAAGGTGAGGGACAGTGGATTCCTCTTGACTCTGATTCTCGG
TCGTCTATGGAATCTATCTAGATGCGCCCGGAGCACCCTTCAAGAAGCAG
GTCAAGATCTCCATCTTCCTCCTTTGGAAAGACATCCCAAGACTACCCGT
TGGCAGTCTTTGATCCGAATGAGAATGACTCCGAAAGCAGTCAGTTCATA
ACGGTTGGGCGGGAAAGTACCGACTCCGCCCGGCCCGATCGGCGAGAGAA
CACGAATGAGCCTTTATTGCCAACTTCAACTCATCATCCCCGTCGCATAG
CGGCGGCGAGGCCATTTACATGTACGCTTTCTGGGATTCGCGCGTGGATT
AAAGGCCCGCCACATCCACACCGGTATCAGATCACTCCATGGTTGCAGCG
CTGGCAGACGGCACCGGGCCGCCTTGTGGAGCGCTATTTTCCGAGCACTC
GTGCCAAAGTTTGGCTTTTGTTGGCCTGCATATGCACCTGGGGTGTCATA
TTTCTCTCCATCCTGCATTCCTCTGTAGCTGGCCAGCAGGTATCCGGATA
CGGAGTGCCTGTCAAGCTATCGTGTAACGCTAGACTATGGCCAAACTCGA
CCGACTGCGGTCTGAATGGTGACTCCTGTCGCCCTTTTGACGACGGGGCA
TTTGCCTTTCGCTGTCCCGCAAGTTGCGCAGATGCGATGCTGCTAGAGCC
GTATTTTGTAGGCCCCGAGGAGTACAACTATCGTCCTCTTGTCATCGGGG
GCACTGCAGAAGGTGATAGTACTGAGGGTATCTACCGCGGAGACTCAGCC
ATCTGTCCTGCGGCACTACACGCTGGTCTGATAGATAGCCAAAAAGGCGG
CTGTGGTGTCTTGCGTCGAACGGGTGAAAGAACCAATTTTCCATCAGCGG
CAAGTAACGGCATCGAAAGCATTGGATACGCTTCATACTTCCCACTCTCC
TTCACCTTTAGCGGAGAGCCATCTGAAACAAGCTGCCAGGACCTCCGCTG
GCCACTTTTCACCTTCTCAGTCGTTGTAACAACCCTGCTATCCCTATTTA
TCACGTCTCCCGCAGCATTCTATGCCTCTATCTACTTCATCGTCTACTTC
CAGGTCGCTCTCTCCTCCGACCCGCCTTACTCCCCAGACTACTATGAAGT
CGTATCTACAGCCCTAGGCCGCTTCCTCCCCTGCGCCTTCGTCGGCTTTG
CAATTTACTACTTTTGCGTCCGCAAAACTCTAACAGACCTCACCGCACAC
TGGGACAAGACCGTCCTCTGGCTCGGCAGCTGCTGGGTCGGCGCCCTCAA
CACCGACACATTCGACAAAATTCCCATCTCACGCCTCACACCTCACGACA
TCCAACAACAACCAGGCGCCATCCCCGCCTTGATCATCATCATTGGCCTC
CTCGTCGCCATTGTTCTCACCCAAGCCATCGCTTTCCGCAGAGAAGGCCG
CATGCCCAAAATGCTTCTCCTCTATGGAATCATGGCCTGCGGCGTGATCG
CCCTGATGCTCGTCCCGCACATGAACCTTCGCATTCATCACTACGTCCTC
AGCCTCCTCTTCTTACCGGGGACAACACTCCAAACGCGCCCCAGTCTCCT
ATACCAAGGCCTCCTGGTAGGACTGTTCATCAACGGCATCGCCCGCTGGG
GCTTCGATAGCATTCTGCAGACGTCTGCTGCATTGCTTGACGGCGCGCAG
CTGGGCAGCGTCCTGCCTGTCATTGGGGCTCCTGTTATGATGTCACGTCA
GAACATCATGTTCAATTTCAATGATGTAGACAAAGATGCAGATGGGATTA
GCGTGCTTGTTAATGATGTCGAACGCTTCCGGGCGTTCAAGTCTGATGAT
GGGATGTTGGAGTCGTTTAATTGGACCCGCCATTTGGAAGGTGAGCCGGA
GTATTTCCGGTTTGGGTACATTAAAGTTAATGCGTTGGGAGGAATTTGGT
ATGAGGATTTTACGAGGCCGGGGACTTGGGAAGGTGAGGGACAGTGGATT
CCTCTTGACTCTGATTCTCGGTCGTCTATGGAATCTATCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004918-T1.utr3p1 | KJC3_004918-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036609 |
| DBxref | InterPro:IPR004043 |
| DBxref | PFAM:PF03815 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1111650..1114037 + |
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