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KJC3_004920-T1, KJC3_004920-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004920-T1
Unique NameKJC3_004920-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1119304..1121400+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004920-T1 ID=KJC3_004920-T1|Name=KJC3_004920-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2097bp|location=Sequence derived from alignment at ch4:1119304..1121400+ (Aspergillus niger KJC3)
CCGCGCGGCCCCGGAGTCTTGACGCTTTTCTTACGAAAACCCCCCCCCCC
CCCCCCTAAAACCTTGCAGTGGCACGATCGCACAGAACTGCTAGCTATGC
GAAATCGCTGACAAAAATTTCTGGCGAAACGGATCTTGACACGATATACA
TATCGCATCTTGAGTTTATCGTTGCCTGGCACTGATCTGCTTTTGATCGT
CGGCGGAGTTGCGGAGAAGACCGGCTGCGGTTCTACATAACACAGCTGTC
TGCCAGCTCATTGCGCCTGTGTGACAATCCACCTAATTAGCGATCTTCTC
ATATTCCCACAGAGATGCTCACCTTCCGGAAGTCGCTACTCGCGGCTGCG
CTTCTGATTACCTTTATCGTCTACCTCCGATCGTCGCATACCGCCTCTTC
CCTTCCGTCTCCGGATACCTCCTCCGCCGGACACCTCTACAACCAGGATT
ACGATGGTCATGCAGACAATGAGCGAAAAGGTGGAACTAGAGACACCGTA
CAACAGCTGCCGCTGACCCCGCCACCGAGCGCCCCCTTGCGCGATCGCTT
GCGCTACCACTTTCCGTACGATCTGGAAGCCAAGTTCCCGGCGTTCATCT
GGCAGACGTGGAAATATGCGCCGTCATCGATGTTCTTCAGCGAAAGCCTG
CGTGATCCGGAGTCCAGCTGGTCCGAGTTACATCCCGGATTCGTCCACGA
GGTCGTTCCCGATGATACCCAACGCCATCTGATCAAATACCTGTACGGCG
CTGTTCCTGATGTGTTCGAGGCTTACGATGCTATGCCGTTGCCCGTCTTG
AAGGCCGACTTCTTCCGATACTTGATCTTGCTCGCGCGGGGTGGAATCTA
CAGCGATATCGATACCACGGCGTTGAAGCCGGCGTCTGACTGGCTGCCAG
CCGAGTTGGATCTGGCCACAGTTGGAGCGGTGGTGGGCATTGAGGCGGAT
CCTGACCGCCCCGACTGGCATGACTGGTATGCGCGCAGAATCCAGTTCTG
CCAATGGACCATCCAAGCCAAACCCGGACACCCCATCATGCGCGATATTG
TCTCCTACATTACGGAGGAGACATTGCGGATGAAGAAGGCGGGTATTCTA
AAGACTGGCAAGATGGACAAGACCGTCATGGAGTACACTGGGCCAGGCGC
TTGGACGGATGCGGTTTTCCGGTATTTCAACGATCCAGAGTACTTCAACA
TTGAACCCGGCTCGACGTTGAACATCACCTATGAGGACTTTACGGGTCAG
GAGGGATATAAGAAGGTCGGAGATGTGGTGGTCTTGCCCATCACCAGCTT
CAGCCCGGGAGTGCACCAAATGGGTGCCGGAGATGTTGATGATCCCATGG
CATTCGTGAAGCATCACTTTGAAGGTATGCCGCCTCAATTCCTCCTATTG
CTTGACTCAAAGCTAACACGCCAACCAGGAACTTGGAAGGATGACTCCTC
TCTATAAGCCGTCATTATAAATCGCTTTACATTACACCTTACACTACGAT
ACGTGCGCGTGGTTGAATCCCACTGCTTCGTCGACAGGACTTGCACAACG
CACGTCCTTAGACAGCTGGATATGACCATATAGCATAAGTGGCATATCAT
CAGATCCTTGCACCTTGTCGGTCGGACACGAGCAGGGGCCCTTCATGGCC
ACCTACACAACAACCTCGCAGCATCCACCCAACATTTTCCGTCCTCAAAC
TCAATCTAATGCCCCTTGCTCACCCAAGCTAGCCATGTCCCGTATACGAA
AATGCTGGCTCTCCGGCAGAGTGAGCTATTGCTTTGTGCTCATGACTCAC
GGCTCTCAGCTTAGCTTTCCATCCATGACAAGCATGTCCGAGCTGTAGCT
CGATCGCTAGCATGCTTGTCAAATGGGCCCCCGTCTGTTTCTTCTCTGTG
TCCATATAACCTACATATGTTTTTAGTGTCTTGCTCCAAAATCTTTAGAA
TTTGATACCCGCAGGCTGGGAACACGAATGAGAACAGCGATGCACTTTGA
TCTCTTGACATATGTTTTACCTAATCTAGAGTTACATTGCATTCCGGAAT
GTGCCTTTGCGCATACTTTAATAGAAACTCGTAATTTGCGCTCTTCC
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Coding sequence (CDS) from alignment at ch4:1119304..1121400+

>KJC3_004920-T1 ID=KJC3_004920-T1|Name=KJC3_004920-T1|organism=Aspergillus niger KJC3|type=CDS|length=2178bp|location=Sequence derived from alignment at ch4:1119304..1121400+ (Aspergillus niger KJC3)
ATGCTCACCTTCCGGAAGTCGCTACTCGCGGCTGCGCTTCTGATTACCTT
TATCGTCTACCTCCGATCGTCGCATACCGCCTCTTCCCTTCCGTCTCCGG
ATACCTCCTCCGCCGGACACCTCTACAACCAGGATTACGATGGTCATGCA
GACAATGAGCGAAAAGGTGGAACTAGAGACACCGTACAACAGCTGCCGCT
GACCCCGCCACCGAGCGCCCCCTTGCGCGATCGCTTGCGCTACCACTTTC
CGTACGATCTGGAAGCCAAGTTCCCGGCGTTCATCTGGCAGACGTGGAAA
TATGCGCCGTCATCGATGTTCTTCAGCGAAAGCCTGCGTGATCCGGAGTC
CAGCTGGTCCGAGTTACATCCCGGATTCGTCCACGAGGTCGTTCCCGATG
ATACCCAACGCCATCTGATCAAATACCTGTACGGCGCTGTTCCTGATGTG
TTCGAGGCTTACGATGCTATGCCGTTGCCCGTCTTGAAGGCCGACTTCTT
CCGATACTTGATCTTGCTCGCGCGGGGTGGAATCTACAGCGATATCGATA
CCACGGCGTTGAAGCCGGCGTCTGACTGGCTGCCAGCCGAGTTGGATCTG
GCCACAGTTGGAGCGGTGGTGGGCATTGAGGCGGATCCTGACCGCCCCGA
CTGGCATGACTGGTATGCGCGCAGAATCCAGTTCTGCCAATGGACCATCC
AAGCCAAACCCGGACACCCCATCATGCGCGATATTGTCTCCTACATTACG
GAGGAGACATTGCGGATGAAGAAGGCGGGTATTCTAAAGACTGGCAAGAT
GGACAAGACCGTCATGGAGTACACTGGGCCAGGCGCTTGGACGGATGCGG
TTTTCCGGTATTTCAACGATCCAGAGTACTTCAACATTGAACCCGGCTCG
ACGTTGAACATCACCTATGAGGACTTTACGGGTCAGGAGGGATATAAGAA
GGTCGGAGATGTGGTGGTCTTGCCCATCACCAGCTTCAGCCCGGGAGTGC
ACCAAATGGGTGCCGGAGATGTTGATGATCCCATGGCATTCGTGAAGCAT
CACTTTGAAGGAACTTGGAAGGATGACTCCTCTCTATAAATGCTCACCTT
CCGGAAGTCGCTACTCGCGGCTGCGCTTCTGATTACCTTTATCGTCTACC
TCCGATCGTCGCATACCGCCTCTTCCCTTCCGTCTCCGGATACCTCCTCC
GCCGGACACCTCTACAACCAGGATTACGATGGTCATGCAGACAATGAGCG
AAAAGGTGGAACTAGAGACACCGTACAACAGCTGCCGCTGACCCCGCCAC
CGAGCGCCCCCTTGCGCGATCGCTTGCGCTACCACTTTCCGTACGATCTG
GAAGCCAAGTTCCCGGCGTTCATCTGGCAGACGTGGAAATATGCGCCGTC
ATCGATGTTCTTCAGCGAAAGCCTGCGTGATCCGGAGTCCAGCTGGTCCG
AGTTACATCCCGGATTCGTCCACGAGGTCGTTCCCGATGATACCCAACGC
CATCTGATCAAATACCTGTACGGCGCTGTTCCTGATGTGTTCGAGGCTTA
CGATGCTATGCCGTTGCCCGTCTTGAAGGCCGACTTCTTCCGATACTTGA
TCTTGCTCGCGCGGGGTGGAATCTACAGCGATATCGATACCACGGCGTTG
AAGCCGGCGTCTGACTGGCTGCCAGCCGAGTTGGATCTGGCCACAGTTGG
AGCGGTGGTGGGCATTGAGGCGGATCCTGACCGCCCCGACTGGCATGACT
GGTATGCGCGCAGAATCCAGTTCTGCCAATGGACCATCCAAGCCAAACCC
GGACACCCCATCATGCGCGATATTGTCTCCTACATTACGGAGGAGACATT
GCGGATGAAGAAGGCGGGTATTCTAAAGACTGGCAAGATGGACAAGACCG
TCATGGAGTACACTGGGCCAGGCGCTTGGACGGATGCGGTTTTCCGGTAT
TTCAACGATCCAGAGTACTTCAACATTGAACCCGGCTCGACGTTGAACAT
CACCTATGAGGACTTTACGGGTCAGGAGGGATATAAGAAGGTCGGAGATG
TGGTGGTCTTGCCCATCACCAGCTTCAGCCCGGGAGTGCACCAAATGGGT
GCCGGAGATGTTGATGATCCCATGGCATTCGTGAAGCATCACTTTGAAGG
AACTTGGAAGGATGACTCCTCTCTATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004920KJC3_004920Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004920-T1.utr5p1KJC3_004920-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004920-T1.exon1KJC3_004920-T1.exon1Aspergillus niger KJC3exon
KJC3_004920-T1.exon2KJC3_004920-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004920-T1.cdsKJC3_004920-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004920-T1.utr3p1KJC3_004920-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004920-T1KJC3_004920-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR029044
DBxrefInterPro:IPR007577
DBxrefPFAM:PF04488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1119304..1121400 +
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