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KJC3_004925-T2, KJC3_004925-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004925-T2
Unique NameKJC3_004925-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1134329..1135800-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004925-T2 ID=KJC3_004925-T2|Name=KJC3_004925-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1472bp|location=Sequence derived from alignment at ch4:1134329..1135800- (Aspergillus niger KJC3)
CCGCCAGTAAGCCACAGCTTGGTTTGCCTATCGCGTGTAGATAAGCTAGA
GAGTTAGCTATCTTATCCCCGCAACTTTACCGATAGGCTTTGTCACCGGT
TAGAGCGAGAAGGTTCTGCCCGACTGCCCCTCATACAGTACACAGCATGC
CCGGTGAAGAGCATTATCGGGCTCTAGGCCTGTCAGGTCGATACATTGCT
TGCCATAGCTCCAGCTTACAAGTCTGCTGAATCCTGACCACAACAATCCT
AGGCCCCCAGGCTCCCCGATGCATCTCCACGAGGTATGAAAGCTCTCCCA
GAATTTAGCACAAGTCTGGGTGGCGCCTGAAAGGAAGCCGATTGATACCC
CTGCTATCGAGCCGGTTGTATCTATTTAATAGGAGTTCCCTCTTTCAGGG
TGTATTTGAGTGCCTAGAACTTTGGAATGTCGCCGGAACGTGTCACCACG
GAGCCATTGCACTCTCCTGACTGGGATAATGACTGGCTCAGGCAATTGGC
TGGCGATATTGTCGCAGGATCGCTGTCCGCAACCATTATTGCCCCGATCA
CAACAGTCATCGACCGGTAAATGTACTGAAGACGAACTCAGGAACTCCAT
GTGCTGATATCTCGAGTCCAGGAGCGTCGTGGAGAGGCTCTCCTCAAATA
GATCCATCCTGCATACACTTCGCACACATGCCATCTGTTCCATCCTCAAA
CCGAGAAAGTTCTACTTTTCTCGACCTTTCTTCATCGCTTGGTCTCTCTA
CGCCGCAACCTACGCTACGGCAAATGCTACCGACACAAGCCTCGAGCACC
TTTCCAAAGTTACAGAGAAATCAACGACCGCGAGTCTCGTTCCAACGTTC
AGTTTCCTCCCAACATACGTTGTCAATGTGTGTCTGGGAATCCTAAAGGA
TATAAGATTCTCTCAGATTTACGGACACCCAGAAGGTCGTCTCAAGCAGC
CACCTCCCATCCCAAGGCTCGCGTACATGGCCTTTCTATTCCGCGATAGC
ATCACTATATCCAGCTCCTTCACGCTGGCTCCGCAGGTGGCCTCGTTAGT
TCCAGATTGGATCACTGCAGATCCGCATACCAAAAGAACTGTTACCCAGC
TCGCTCTCCCCGCCTTGGTGCAATATGTGAATACGCCGTTTCATATGATC
GCGTTAGATGTGATTGCTCGTCCACAGGTGGCCACAATAGCAGAAAGATC
TGTTACGATACGAAGAGGGTATGTTCAGTCATCGTCGCTGAGGGCAGCAA
GAGTTCTACCGGCATTCGGGGTGGGGTGTATAATCAATACGGATTTGAGG
GCATCTCTGCACGAACGATGGATGGTTAGATAGAGAGAATATCAGTGCGG
GGCACAGCAAGCGAGGATAACTTATCTCTCCACTTGATTGCCATGACTAT
CACTTTTGCGGGCACGTATCAGGACAGCGGCAGTAGCCGGACAGTCCCCA
AGTATTTGGACCCGTTGCGAGG
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Coding sequence (CDS) from alignment at ch4:1134329..1135800-

>KJC3_004925-T2 ID=KJC3_004925-T2|Name=KJC3_004925-T2|organism=Aspergillus niger KJC3|type=CDS|length=1428bp|location=Sequence derived from alignment at ch4:1134329..1135800- (Aspergillus niger KJC3)
GAGCGTCGTGGAGAGGCTCTCCTCAAATAGATCCATCCTGCATACACTTC
GCACACATGCCATCTGTTCCATCCTCAAACCGAGAAAGTTCTACTTTTCT
CGACCTTTCTTCATCGCTTGGTCTCTCTACGCCGCAACCTACGCTACGGC
AAATGCTACCGACACAAGCCTCGAGCACCTTTCCAAAGTTACAGAGAAAT
CAACGACCGCGAGTCTCGTTCCAACGTTCAGTTTCCTCCCAACATACGTT
GTCAATGTGTGTCTGGGAATCCTAAAGGATATAAGATTCTCTCAGATTTA
CGGACACCCAGAAGGTCGTCTCAAGCAGCCACCTCCCATCCCAAGGCTCG
CGTACATGGCCTTTCTATTCCGCGATAGCATCACTATATCCAGCTCCTTC
ACGCTGGCTCCGCAGGTGGCCTCGTTAGTTCCAGATTGGATCACTGCAGA
TCCGCATACCAAAAGAACTGTTACCCAGCTCGCTCTCCCCGCCTTGGTGC
AATATGTGAATACGCCGTTTCATATGATCGCGTTAGATGTGATTGCTCGT
CCACAGGTGGCCACAATAGCAGAAAGATCTGTTACGATACGAAGAGGGTA
TGTTCAGTCATCGTCGCTGAGGGCAGCAAGAGTTCTACCGGCATTCGGGG
TGGGGTGTATAATCAATACGGATTTGAGGGCATCTCTGCACGAACGATGG
ATGGTTAGATAGATGAGCGTCGTGGAGAGGCTCTCCTCAAATAGATCCAT
CCTGCATACACTTCGCACACATGCCATCTGTTCCATCCTCAAACCGAGAA
AGTTCTACTTTTCTCGACCTTTCTTCATCGCTTGGTCTCTCTACGCCGCA
ACCTACGCTACGGCAAATGCTACCGACACAAGCCTCGAGCACCTTTCCAA
AGTTACAGAGAAATCAACGACCGCGAGTCTCGTTCCAACGTTCAGTTTCC
TCCCAACATACGTTGTCAATGTGTGTCTGGGAATCCTAAAGGATATAAGA
TTCTCTCAGATTTACGGACACCCAGAAGGTCGTCTCAAGCAGCCACCTCC
CATCCCAAGGCTCGCGTACATGGCCTTTCTATTCCGCGATAGCATCACTA
TATCCAGCTCCTTCACGCTGGCTCCGCAGGTGGCCTCGTTAGTTCCAGAT
TGGATCACTGCAGATCCGCATACCAAAAGAACTGTTACCCAGCTCGCTCT
CCCCGCCTTGGTGCAATATGTGAATACGCCGTTTCATATGATCGCGTTAG
ATGTGATTGCTCGTCCACAGGTGGCCACAATAGCAGAAAGATCTGTTACG
ATACGAAGAGGGTATGTTCAGTCATCGTCGCTGAGGGCAGCAAGAGTTCT
ACCGGCATTCGGGGTGGGGTGTATAATCAATACGGATTTGAGGGCATCTC
TGCACGAACGATGGATGGTTAGATAGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004925KJC3_004925Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004925-T2KJC3_004925-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004925-T2.cdsKJC3_004925-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004925-T2.utr3p1KJC3_004925-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004925-T2.exon2KJC3_004925-T2.exon2Aspergillus niger KJC3exon
KJC3_004925-T2.exon1KJC3_004925-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004925-T2.utr5p1KJC3_004925-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1134329..1135800 -
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