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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1143306..1146408- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004929-T1 ID=KJC3_004929-T1|Name=KJC3_004929-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3103bp|location=Sequence derived from alignment at ch4:1143306..1146408- (Aspergillus niger KJC3)
ATTCCCGTTTTGGATGGCTCCGTTTTCGAGGAACTTCAAGATCGAAGCCA
TCCGATACACATCCACAGCGTTCTTGTTTCTCTATAAATAGCCCGCTTGA
GTATGCCTGGGCTGTACACTTTTATGGTGAGTTCTAGCAATGCGAATCGT
TATCTCCTTGCGCAATGCCAAGCGCTTGCTACTTAGTTTCTCCGCCGGAA
CCACAGGCGAGGCGAGGTTCCCCTGACGGCCGCAACAGGTGCCAAACGCC
GCCCTTGTCCTTACCCAGAAAAGATGTGCAAAACAGTACACGCCTCTACG
GTCAAAAAATTTTCCATGAGTGTCGCGTGGCCGTCATGAGCCACGTCATG
CAACGAATTGGTTGCCGGAAAGCTCCAGATGTCGGCCTTGAAGCACAGAA
TTTAGTTTAGTGGCAACCGAGATATCCGAACGGAACCAGGAGATAACGAA
TGGGATCCACTCAAAGCCCCATCGGGCACACGAATCAGCAGAATCTGGCG
AGGTCAGCGACATCCTCCGAGTCGAGAGCCCGGGGCTGGCGAATCGCCGA
TGCGATACGTCGATCAGAGTACGGCATCTCGATTCTATTCAGTTTTCTAT
ACTGAAGGCATGCGCGGAATATCACGGAGCACTGGTCGCGTGTGGATTTG
ATTACCCCCAGTCTACTATCCAATTAGTTTATTATGCTAGTAGCTTTCGG
TTCTTGTCCGTGGATCGCTGTCCCACAATTCCGGCCACCCCTGGGTGGGA
GGCGTGGCCTGGAGAACAGGCGCCATGACCAGAAGACGCGTACGCAAGCT
ACAGAGTCCGCTGTACACAAGTCCGCTCGTTAAGCCGTTATTGGACGTGT
GTTCCCTTCCTAAGAAAACCCCGGCCTGCCTTTTAGCATGGCTGGCGTCC
TCCAAATACATTTGAGGCGACTCAACCTCAAATTTTCCTTCTGGCAATGT
CGCTGGAGCTGATTTCCCGTCGCCTGTCACATCTTGTGTCGGGTTAACAA
TGATTCCTCCCCTTATTTGGGCGTGCATTGCCGCGCTCGCTCAGACAGCC
TGCGGAGATTATGTATCCACAAACTACCAAGAGTACAACGACGGAGCGCT
AGGACACCGTCCTCACTTGGAATTTCATTCCAGCTCCGAATATGCGCCCC
TCCTACAAGTCAACATATGGGATCAGGATGCTATCTCCGAGACGGGGTCC
CACATATTCATCAAACATGATGGTAATGACTCCTCGCCACTCTCGTCGCC
GCTCATCTTGGATGCCCACGATTTGAGTGCCGTCTATATGAATCGGACCT
TCAAGAATGTGTTCGGTACCCGCGTCCAAGAGAATTTCGGCAAGAAGTAT
TTGACTTTTTGGGAAGGAGAGAAAGGCGATGGGATAGGTGATGGCTATGG
GCTCGCCTACGACGACACCTACCGCTTGGTCTACAAAATATGGGCACAGA
ATATCAAAGTGCACAGCGACCTCCACGAGTTTGCATTCACAGGGAACGGA
ACAGCTTTGGTCACAGGCGTCAACGCGATCAACGCCCATGCGTCAGACTT
TCTGGATAAAGGCTGGATAACACCCCCCAGATTCGAGGTCCTGGACTCTA
TCTTCCAGGAGATCGACCTCGAGACTAATGAAGTGCTTTTCGACTGGCGA
GCGCTTGATCACATTAACCCCATGGACTCCTACGAGCCTATGGGCAGAGG
ATGGGATGCATATCACATGAACAGCATCCAGAAGGTAAGAGAATGACATA
CGTCTCCCGACGACCTGTAAACACTCTCTGACATGCCATGGTTCTAGACC
AAAGCAGGCAACTATCTCATTTCCATTCGTCACTTGCACGCTGTCTACCT
CATCAACGGAAAAACAGGCGACATCATATGGACAATGGGCGGCAAACGCA
ACGACTTTCTCGAGTTGCCCCGCGCCAAAGAAGCCGAGTCAGCTGCACCC
CTGCTGTCAATGCAGTGGCAGCATCACGCTCACTTCGTTGAGGGAACCGA
CGAGACCCAAATGACCTTATTTGACAACCATGTCAAGATCACCTCTCACG
GCGTTTGCGACACCGATTGCTCGCGCGGCCTGCACATCGCTATCAATGAC
ACTGCCTCACCCCCGACCGTCCAACTCCTACGCGAATTCCATCACCCATC
CCACCTTCAGGCCCAGAGCCAAGGCAGCATGCAGCCCCTATCGCCCTCTG
CCGATGATCTGGGCAATGTGTTCATTGGCTGGGGGCGGTGTCCCACGTTT
ACGGAGCACAACTCGTCGGGCGAGACAGTCATGGACGTGCAGTTTTCGCC
GTGGCATAGCGACAACATTCCGGACGCGCTAGACAACTACCGCGCCTATA
AAATGGACTGGTCGGCCACACCCTGGTGGGACCCTGCCATCGCACCACGG
AAAAACGAAGATGGCGAGTTGGTCATGTACGTTAGCTGGAACGGAGCGAC
CGAGGTAGCCAACTGGGTTATCCGGGGAGCAGCCAGCGAGGATCTGGACG
AAGAAGGCGAAATACTGGTTGCATCACGCCGGACCGGCTTTGAAACCAAG
CTGACAGTTGGGGAGACTGATTGGCGCTATATCTGGGCCGAAGCCTTGGA
TAGCCAGGGAAATGTTCTCCGATCGAGTGAAATCGTGGACCTGGACACAG
CGGATTTATCAGTCGCTCATGACACCTACGATGAGCCTGATTCCACCTTC
ATCCCCCCGCAGGACATACCCTCTGGATTGTCTATAAATACAGTAGTCTT
CTTGGCGAGCGGGCTGACCGTTGTTGTGTTGGTGACAATTGCAGCGGGAA
TTATGTGGTGGCGCAGGCGTAAGGCGTACAATCGCCTGGAAGCGGAGGAC
TTCGATCTCGCTTCTGATGACGGCTTTGATGAGCATGATGACGATGACGA
GGAGGCTAGTGATAAGGATGCTGATGTTGATCATCACTCCAGAGGCGATG
AGGACCGTCGTGCTCTGATTCCCAAGACGGAACAAAGAAACATGAGTAGC
GTGTAGACTCTCATCTAGTACCTTTATTTGTAAATATATTCATAATTGAC
CTACTACTTTCTCCTAAGTTCAAAGGCTTGTAAGAGAAACACCTAGCTCC
CCC back to topCoding sequence (CDS) from alignment at ch4:1143306..1146408- >KJC3_004929-T1 ID=KJC3_004929-T1|Name=KJC3_004929-T1|organism=Aspergillus niger KJC3|type=CDS|length=3888bp|location=Sequence derived from alignment at ch4:1143306..1146408- (Aspergillus niger KJC3)
ACCAAAGCAGGCAACTATCTCATTTCCATTCGTCACTTGCACGCTGTCTA
CCTCATCAACGGAAAAACAGGCGACATCATATGGACAATGGGCGGCAAAC
GCAACGACTTTCTCGAGTTGCCCCGCGCCAAAGAAGCCGAGTCAGCTGCA
CCCCTGCTGTCAATGCAGTGGCAGCATCACGCTCACTTCGTTGAGGGAAC
CGACGAGACCCAAATGACCTTATTTGACAACCATGTCAAGATCACCTCTC
ACGGCGTTTGCGACACCGATTGCTCGCGCGGCCTGCACATCGCTATCAAT
GACACTGCCTCACCCCCGACCGTCCAACTCCTACGCGAATTCCATCACCC
ATCCCACCTTCAGGCCCAGAGCCAAGGCAGCATGCAGCCCCTATCGCCCT
CTGCCGATGATCTGGGCAATGTGTTCATTGGCTGGGGGCGGTGTCCCACG
TTTACGGAGCACAACTCGTCGGGCGAGACAGTCATGGACGTGCAGTTTTC
GCCGTGGCATAGCGACAACATTCCGGACGCGCTAGACAACTACCGCGCCT
ATAAAATGGACTGGTCGGCCACACCCTGGTGGGACCCTGCCATCGCACCA
CGGAAAAACGAAGATGGCGAGTTGGTCATGTACGTTAGCTGGAACGGAGC
GACCGAGGTAGCCAACTGGGTTATCCGGGGAGCAGCCAGCGAGGATCTGG
ACGAAGAAGGCGAAATACTGGTTGCATCACGCCGGACCGGCTTTGAAACC
AAGCTGACAGTTGGGGAGACTGATTGGCGCTATATCTGGGCCGAAGCCTT
GGATAGCCAGGGAAATGTTCTCCGATCGAGTGAAATCGTGGACCTGGACA
CAGCGGATTTATCAGTCGCTCATGACACCTACGATGAGCCTGATTCCACC
TTCATCCCCCCGCAGGACATACCCTCTGGATTGTCTATAAATACAGTAGT
CTTCTTGGCGAGCGGGCTGACCGTTGTTGTGTTGGTGACAATTGCAGCGG
GAATTATGTGGTGGCGCAGGCGTAAGGCGTACAATCGCCTGGAAGCGGAG
GACTTCGATCTCGCTTCTGATGACGGCTTTGATGAGCATGATGACGATGA
CGAGGAGGCTAGTGATAAGGATGCTGATGTTGATCATCACTCCAGAGGCG
ATGAGGACCGTCGTGCTCTGATTCCCAAGACGGAACAAAGAAACATGAGT
AGCGTGTAGATGATTCCTCCCCTTATTTGGGCGTGCATTGCCGCGCTCGC
TCAGACAGCCTGCGGAGATTATGTATCCACAAACTACCAAGAGTACAACG
ACGGAGCGCTAGGACACCGTCCTCACTTGGAATTTCATTCCAGCTCCGAA
TATGCGCCCCTCCTACAAGTCAACATATGGGATCAGGATGCTATCTCCGA
GACGGGGTCCCACATATTCATCAAACATGATGGTAATGACTCCTCGCCAC
TCTCGTCGCCGCTCATCTTGGATGCCCACGATTTGAGTGCCGTCTATATG
AATCGGACCTTCAAGAATGTGTTCGGTACCCGCGTCCAAGAGAATTTCGG
CAAGAAGTATTTGACTTTTTGGGAAGGAGAGAAAGGCGATGGGATAGGTG
ATGGCTATGGGCTCGCCTACGACGACACCTACCGCTTGGTCTACAAAATA
TGGGCACAGAATATCAAAGTGCACAGCGACCTCCACGAGTTTGCATTCAC
AGGGAACGGAACAGCTTTGGTCACAGGCGTCAACGCGATCAACGCCCATG
CGTCAGACTTTCTGGATAAAGGCTGGATAACACCCCCCAGATTCGAGGTC
CTGGACTCTATCTTCCAGGAGATCGACCTCGAGACTAATGAAGTGCTTTT
CGACTGGCGAGCGCTTGATCACATTAACCCCATGGACTCCTACGAGCCTA
TGGGCAGAGGATGGGATGCATATCACATGAACAGCATCCAGAAGACCAAA
GCAGGCAACTATCTCATTTCCATTCGTCACTTGCACGCTGTCTACCTCAT
CAACGGAAAAACAGGCGACATCATATGGACAATGGGCGGCAAACGCAACG
ACTTTCTCGAGTTGCCCCGCGCCAAAGAAGCCGAGTCAGCTGCACCCCTG
CTGTCAATGCAGTGGCAGCATCACGCTCACTTCGTTGAGGGAACCGACGA
GACCCAAATGACCTTATTTGACAACCATGTCAAGATCACCTCTCACGGCG
TTTGCGACACCGATTGCTCGCGCGGCCTGCACATCGCTATCAATGACACT
GCCTCACCCCCGACCGTCCAACTCCTACGCGAATTCCATCACCCATCCCA
CCTTCAGGCCCAGAGCCAAGGCAGCATGCAGCCCCTATCGCCCTCTGCCG
ATGATCTGGGCAATGTGTTCATTGGCTGGGGGCGGTGTCCCACGTTTACG
GAGCACAACTCGTCGGGCGAGACAGTCATGGACGTGCAGTTTTCGCCGTG
GCATAGCGACAACATTCCGGACGCGCTAGACAACTACCGCGCCTATAAAA
TGGACTGGTCGGCCACACCCTGGTGGGACCCTGCCATCGCACCACGGAAA
AACGAAGATGGCGAGTTGGTCATGTACGTTAGCTGGAACGGAGCGACCGA
GGTAGCCAACTGGGTTATCCGGGGAGCAGCCAGCGAGGATCTGGACGAAG
AAGGCGAAATACTGGTTGCATCACGCCGGACCGGCTTTGAAACCAAGCTG
ACAGTTGGGGAGACTGATTGGCGCTATATCTGGGCCGAAGCCTTGGATAG
CCAGGGAAATGTTCTCCGATCGAGTGAAATCGTGGACCTGGACACAGCGG
ATTTATCAGTCGCTCATGACACCTACGATGAGCCTGATTCCACCTTCATC
CCCCCGCAGGACATACCCTCTGGATTGTCTATAAATACAGTAGTCTTCTT
GGCGAGCGGGCTGACCGTTGTTGTGTTGGTGACAATTGCAGCGGGAATTA
TGTGGTGGCGCAGGCGTAAGGCGTACAATCGCCTGGAAGCGGAGGACTTC
GATCTCGCTTCTGATGACGGCTTTGATGAGCATGATGACGATGACGAGGA
GGCTAGTGATAAGGATGCTGATGTTGATCATCACTCCAGAGGCGATGAGG
ACCGTCGTGCTCTGATTCCCAAGACGGAACAAAGAAACATGAGTAGCGTG
TAGATGATTCCTCCCCTTATTTGGGCGTGCATTGCCGCGCTCGCTCAGAC
AGCCTGCGGAGATTATGTATCCACAAACTACCAAGAGTACAACGACGGAG
CGCTAGGACACCGTCCTCACTTGGAATTTCATTCCAGCTCCGAATATGCG
CCCCTCCTACAAGTCAACATATGGGATCAGGATGCTATCTCCGAGACGGG
GTCCCACATATTCATCAAACATGATGGTAATGACTCCTCGCCACTCTCGT
CGCCGCTCATCTTGGATGCCCACGATTTGAGTGCCGTCTATATGAATCGG
ACCTTCAAGAATGTGTTCGGTACCCGCGTCCAAGAGAATTTCGGCAAGAA
GTATTTGACTTTTTGGGAAGGAGAGAAAGGCGATGGGATAGGTGATGGCT
ATGGGCTCGCCTACGACGACACCTACCGCTTGGTCTACAAAATATGGGCA
CAGAATATCAAAGTGCACAGCGACCTCCACGAGTTTGCATTCACAGGGAA
CGGAACAGCTTTGGTCACAGGCGTCAACGCGATCAACGCCCATGCGTCAG
ACTTTCTGGATAAAGGCTGGATAACACCCCCCAGATTCGAGGTCCTGGAC
TCTATCTTCCAGGAGATCGACCTCGAGACTAATGAAGTGCTTTTCGACTG
GCGAGCGCTTGATCACATTAACCCCATGGACTCCTACGAGCCTATGGGCA
GAGGATGGGATGCATATCACATGAACAGCATCCAGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004929-T1.utr3p1 | KJC3_004929-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004929-T1.utr5p1 | KJC3_004929-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR039535 |
| DBxref | PFAM:PF14269 |
| DBxref | PFAM:PF05935 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1143306..1146408 - |
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