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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1148790..1150296+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004930-T1 ID=KJC3_004930-T1|Name=KJC3_004930-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1507bp|location=Sequence derived from alignment at ch4:1148790..1150296+ (Aspergillus niger KJC3)
ATGTCCAACCTCCTGTGCAGGACACCGGTTGGCCAAAAGGCACGAACCTG
TGTCATCACAAGACCTACTCTAATCCTTCATTCTCTCCGATATTGCTCTA
CGGGGACTACTTTTGAGAAGGTTCCCAGCATTTCCTCCTCAGTTGCCAAG
TCACAAGCTACAGAGAAGCCCTCCTCTGCGCCACCTCATTCGGTCCTCCC
TACCAAGACTCTCCTGCGGTCTCTCCTCGTGACCACCATCTCCTCCCACC
AAGCTCTCCTCGTTCCTTGTCTGTCTATCCTCTCTTTCCTTACCAAGCCC
CGAGGTGTCTTGCTAGATGTGGACCGCAACCCTCTCATCCATTGGTTCCT
CAAGAAGACATTCTACGATCACTTCTGTGCGGGGGAAAAGGAGAGCCAAG
TCCGGGATAAGATCCGCCAAATCAAAAGTACAGGACTCCGAGGAGTCATT
TTGACCTACGCGCGGGAGACGGTGCAAGATTCCAGCACGAACCAAACCCA
ATTCGCACACAGCCAGGTATCCCAAAAGGCAACCGACACAGAGTCATGCG
AGTTCATCGCCGCCTGGCGGGAGGGTTACCTGAAGACAGTGGACATGCTC
GGCGAAGGTGACTTCCTTGCCCCAAAGTAAGTCGACCCCCCAGAGTCCAG
GGATACCTTCACCGGACAGAAAGATAGGAAAATGAATGCTGATCCCTGCT
ATCAGGCTCACTGGAGCCGGACCCAAAGTCACAGAGGCCTTTGCCTCCGG
ACAACCCGTCCCAACACAAATGGTCGAGGCCCTAGATGAAGTGTGCCAAC
GGGTAGTCGAGAAGAACGCCCGTCTCCTCATGGACGCCGAACAGCACTCC
TTTCTCCAAGGGATCCACAGCCTCACATTGGACATGATGCGCAAGTACAA
CCGAAACGGCAAGGCCGTAGTGTACAACACATACCAGGCTTATCTCAAAA
GTACGCCGAGCACGATAGCGTCGCACATGGAGATAGCAGACCAGGAAGGA
TTTACGTTTGGATTGAAGCTGGTGCGGGGAGCGTACATGAGATCGGACCC
GAGACAGCTCATCCACGATACGAAGCAAGATACCGATATCGCGTACAACT
CCATCGTGCGGGGCGTCTTGCAGCAGCGCTATCAGGGTTTCGGAGAATCC
GGACGCAGGTTTCCCACTACTGATTTGTTTCTGGCTACGCATAACATCGA
GAGTGCTGTGGCGGCGCATGAGCTGCACCAGGCTCGGTTGCAGGCGGGGC
TGTCCACTGGCCGAGTGGAGTTCGGACAGCTGCTGGGGATGGCGGATGGG
GTAAGTTTCGGGCTGTTGCAGTTGAAAGATCAGAACAATGTGGCTCCCGG
AGTGTACAAGTGCTTGACTTGGGGTAGTATGGGAGAGTGTCTGGGTTATT
TGGTGCGGAGAGCAGCGGAAAATAGGGATGCAGTTTCACGTACTATGACT
GAGCATTTGGCGCTTAAGGCGGAGGTGAAGAGGCGAGTTAGGGCTTTCTT
TGGGTAG back to topCoding sequence (CDS) from alignment at ch4:1148790..1150296+ >KJC3_004930-T1 ID=KJC3_004930-T1|Name=KJC3_004930-T1|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch4:1148790..1150296+ (Aspergillus niger KJC3)
ATGTCCAACCTCCTGTGCAGGACACCGGTTGGCCAAAAGGCACGAACCTG
TGTCATCACAAGACCTACTCTAATCCTTCATTCTCTCCGATATTGCTCTA
CGGGGACTACTTTTGAGAAGGTTCCCAGCATTTCCTCCTCAGTTGCCAAG
TCACAAGCTACAGAGAAGCCCTCCTCTGCGCCACCTCATTCGGTCCTCCC
TACCAAGACTCTCCTGCGGTCTCTCCTCGTGACCACCATCTCCTCCCACC
AAGCTCTCCTCGTTCCTTGTCTGTCTATCCTCTCTTTCCTTACCAAGCCC
CGAGGTGTCTTGCTAGATGTGGACCGCAACCCTCTCATCCATTGGTTCCT
CAAGAAGACATTCTACGATCACTTCTGTGCGGGGGAAAAGGAGAGCCAAG
TCCGGGATAAGATCCGCCAAATCAAAAGTACAGGACTCCGAGGAGTCATT
TTGACCTACGCGCGGGAGACGGTGCAAGATTCCAGCACGAACCAAACCCA
ATTCGCACACAGCCAGGTATCCCAAAAGGCAACCGACACAGAGTCATGCG
AGTTCATCGCCGCCTGGCGGGAGGGTTACCTGAAGACAGTGGACATGCTC
GGCGAAGGTGACTTCCTTGCCCCAAAGCTCACTGGAGCCGGACCCAAAGT
CACAGAGGCCTTTGCCTCCGGACAACCCGTCCCAACACAAATGGTCGAGG
CCCTAGATGAAGTGTGCCAACGGGTAGTCGAGAAGAACGCCCGTCTCCTC
ATGGACGCCGAACAGCACTCCTTTCTCCAAGGGATCCACAGCCTCACATT
GGACATGATGCGCAAGTACAACCGAAACGGCAAGGCCGTAGTGTACAACA
CATACCAGGCTTATCTCAAAAGTACGCCGAGCACGATAGCGTCGCACATG
GAGATAGCAGACCAGGAAGGATTTACGTTTGGATTGAAGCTGGTGCGGGG
AGCGTACATGAGATCGGACCCGAGACAGCTCATCCACGATACGAAGCAAG
ATACCGATATCGCGTACAACTCCATCGTGCGGGGCGTCTTGCAGCAGCGC
TATCAGGGTTTCGGAGAATCCGGACGCAGGTTTCCCACTACTGATTTGTT
TCTGGCTACGCATAACATCGAGAGTGCTGTGGCGGCGCATGAGCTGCACC
AGGCTCGGTTGCAGGCGGGGCTGTCCACTGGCCGAGTGGAGTTCGGACAG
CTGCTGGGGATGGCGGATGGGGTAAGTTTCGGGCTGTTGCAGTTGAAAGA
TCAGAACAATGTGGCTCCCGGAGTGTACAAGTGCTTGACTTGGGGTAGTA
TGGGAGAGTGTCTGGGTTATTTGGTGCGGAGAGCAGCGGAAAATAGGGAT
GCAGTTTCACGTACTATGACTGAGCATTTGGCGCTTAAGGCGGAGGTGAA
GAGGCGAGTTAGGGCTTTCTTTGGGTAGATGTCCAACCTCCTGTGCAGGA
CACCGGTTGGCCAAAAGGCACGAACCTGTGTCATCACAAGACCTACTCTA
ATCCTTCATTCTCTCCGATATTGCTCTACGGGGACTACTTTTGAGAAGGT
TCCCAGCATTTCCTCCTCAGTTGCCAAGTCACAAGCTACAGAGAAGCCCT
CCTCTGCGCCACCTCATTCGGTCCTCCCTACCAAGACTCTCCTGCGGTCT
CTCCTCGTGACCACCATCTCCTCCCACCAAGCTCTCCTCGTTCCTTGTCT
GTCTATCCTCTCTTTCCTTACCAAGCCCCGAGGTGTCTTGCTAGATGTGG
ACCGCAACCCTCTCATCCATTGGTTCCTCAAGAAGACATTCTACGATCAC
TTCTGTGCGGGGGAAAAGGAGAGCCAAGTCCGGGATAAGATCCGCCAAAT
CAAAAGTACAGGACTCCGAGGAGTCATTTTGACCTACGCGCGGGAGACGG
TGCAAGATTCCAGCACGAACCAAACCCAATTCGCACACAGCCAGGTATCC
CAAAAGGCAACCGACACAGAGTCATGCGAGTTCATCGCCGCCTGGCGGGA
GGGTTACCTGAAGACAGTGGACATGCTCGGCGAAGGTGACTTCCTTGCCC
CAAAGCTCACTGGAGCCGGACCCAAAGTCACAGAGGCCTTTGCCTCCGGA
CAACCCGTCCCAACACAAATGGTCGAGGCCCTAGATGAAGTGTGCCAACG
GGTAGTCGAGAAGAACGCCCGTCTCCTCATGGACGCCGAACAGCACTCCT
TTCTCCAAGGGATCCACAGCCTCACATTGGACATGATGCGCAAGTACAAC
CGAAACGGCAAGGCCGTAGTGTACAACACATACCAGGCTTATCTCAAAAG
TACGCCGAGCACGATAGCGTCGCACATGGAGATAGCAGACCAGGAAGGAT
TTACGTTTGGATTGAAGCTGGTGCGGGGAGCGTACATGAGATCGGACCCG
AGACAGCTCATCCACGATACGAAGCAAGATACCGATATCGCGTACAACTC
CATCGTGCGGGGCGTCTTGCAGCAGCGCTATCAGGGTTTCGGAGAATCCG
GACGCAGGTTTCCCACTACTGATTTGTTTCTGGCTACGCATAACATCGAG
AGTGCTGTGGCGGCGCATGAGCTGCACCAGGCTCGGTTGCAGGCGGGGCT
GTCCACTGGCCGAGTGGAGTTCGGACAGCTGCTGGGGATGGCGGATGGGG
TAAGTTTCGGGCTGTTGCAGTTGAAAGATCAGAACAATGTGGCTCCCGGA
GTGTACAAGTGCTTGACTTGGGGTAGTATGGGAGAGTGTCTGGGTTATTT
GGTGCGGAGAGCAGCGGAAAATAGGGATGCAGTTTCACGTACTATGACTG
AGCATTTGGCGCTTAAGGCGGAGGTGAAGAGGCGAGTTAGGGCTTTCTTT
GGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029041 |
| DBxref | InterPro:IPR002872 |
| DBxref | PFAM:PF01619 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1148790..1150296 + |
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