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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1175394..1177612- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004940-T1 ID=KJC3_004940-T1|Name=KJC3_004940-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2219bp|location=Sequence derived from alignment at ch4:1175394..1177612- (Aspergillus niger KJC3)
AGCGAATAATGACCGTCCGTTGATCAGTCCGACTTTCTATCTGAGAAGTA
CCGGTAAGACTAGCCTGGTTTCAATCTGTTTCACATCGTGGGTCTTCAGG
GATTCTTCTTGGCCCACGTTGTGGCGTTGCATTGAAGCTCCCCGCCCCAG
CTCTTCCGCTGTTAAATAGGAGCCAACAAACATACAGTCGCGAGATAGAC
CTAGACTAATTGGATCCTACAGAAGCTTTCAATTGATCGGTCCTACCGGA
TTCCCTCAGGGTTGGAGGTCTGACATCATGTCTTCCCTGGCTGGTCTTGT
CCAGCCCACCACCAGACAGCTGCTGACTGGCGCTGCTCTGCTGTTTTTGA
CGGCGTTCTACTCGCCATTGACGGTGCTGATGCTGACGCCAGTATATGGC
TCGGCTCCTGCCCATATCTTCCACGGCTATGGAGTGGCACTCATTGGCGC
TGCTGGATGGTTCCTTAAAGACCACATCCAGCGATTGACTGGCCGCCGGG
CTCTTTTCCTGCTCCCTGTTGTGGCATTCTGGGTTCCTACCGTTCAGAGT
TTCTTGTTCGCATCGAGCTCCGTTATGGGAAACCCCTTCGGAGCTGTAGT
CACAGAGGTCATTTCCTACTACCCTCTGGTTCTGCTCTCCGTGGCTTGTG
CTGGTAAGCTGGTGCAGTCGGGTTTGAATCTGAGCCAGCACGGTGATGCA
GTCGCTGAGCACGTTCCTCTCGTGGTTACCTATATCCTCTACAAGACTGG
CGAGAAGTTCGCCAAAGCTTTCCTGGCCAAGTTCATTGGAACTACCTTCT
TCTTTTCTCGTGCTGGTCTCCAACTCTTGCTCCCAGTCTTCTACACCGCT
ATTGCCCCTTCCAAGTTCCTGCTCTTTGCTATTCCCTCCCTTCTGTTCTC
CATGACGTCCAATGTCCACATGAACTCTGGAGCATTGAACTCTTTCCTCA
ATGACGAGGGATTCGCCCTTGTTGCCCGCCAGGACTCCACCACCGGTTAC
ATCTCCGTCTTGGATAACCTGAATGATGGATTCCGTGTCATGCGTTGCGA
CCACAGCTTGCTCGGCGGCCAGTGGACCAAGATGCCCCACAACTACAACC
CTGCCGTTATGGACCCCATCTACTCGGTCTTCACCATGCTTGAGGCCGTC
CGCCTGGTTGAAACTGACCACGGCGAGCCCCGCGTAGATGCCAACAGCAA
GGCACTTGTCATGTAAGCTCAGCAGCAACTCGCTCTCCAAGCAGAAACCT
AACCTCTACCAGCGGTCTCGGTGTCGGCACCACGCCCTCTGCCCTGATCC
ACCACGGCATCGAGACCACCATCGTGGAGATCGACCCTGTCGTGCACAAG
TTCGCCACCGAATACTTCCACCTTCCCTCGAACCACATCGCCGCCATCGA
AGACGCCACCGCCTTCGTGAAGCGCACTCCCCCAGCCCAGTATGACTATA
TCGTCCACGACGTCTTCACCGGAGGCGCCGAGCCCCTCGAGCTCTTCACT
CTCGAGTTCCTCGAAGGCCTATCCTCCCTTCTCAAGGATGACGGAGTCAT
TGCCATCGTAAGCCCCCTCCCTCTCTCAACCCCCCACCATCCCCCAACTA
ACCTCGATAGAACTATGCCGGCGACATCTCTCTCTACCCCGCCGCCCTAA
CCGTCCGCACCATCCAATACGTCTTCCCGACCTGCCGCATCTTCCGCGAG
GCCTCCGACTCTGACCTCACCGCCGACTTCACCAACATGGTGATCTTCTG
CAAGAAGAGCTCCGCCACGCCGCTCACCTTCCGCGACCCCGTTTCCGCCG
ATTACATGGGCAGCAAGTTCCGCCAGATGTATCTGATGCCAAAGGTTGAG
ATCGACGCGAGTCGGTTCCAAGATATCGAGAAGGGCGGTCGTCGTGTCCT
CCACTCTAAGAACACCCACCTGCTTCATAAGTACCAGGATCGGGCTGCGC
TCGAGCATTGGAATATTATGCGTCATGTGCTGCCTGATTTTGTTTGGGAG
AACTGGTGATGGTTTTCTACTATACTTACAGTATGTAATTCTTAGTGTAT
CTCTGAGAGATAGATTGATTTAGTTTTCGTTGTTGTGATTCGGATATCTG
TATTCCTAGTACTAGTTGTGGTTTCGGGTGGTTACAGCAATATGACATTA
TAATATGATTTAACTTTGGTTTTTTGAGTGGATAGCATATGGTTGTCTTT
GATAACACGCCCAACTCGA back to topCoding sequence (CDS) from alignment at ch4:1175394..1177612- >KJC3_004940-T1 ID=KJC3_004940-T1|Name=KJC3_004940-T1|organism=Aspergillus niger KJC3|type=CDS|length=4887bp|location=Sequence derived from alignment at ch4:1175394..1177612- (Aspergillus niger KJC3)
AACTATGCCGGCGACATCTCTCTCTACCCCGCCGCCCTAACCGTCCGCAC
CATCCAATACGTCTTCCCGACCTGCCGCATCTTCCGCGAGGCCTCCGACT
CTGACCTCACCGCCGACTTCACCAACATGGTGATCTTCTGCAAGAAGAGC
TCCGCCACGCCGCTCACCTTCCGCGACCCCGTTTCCGCCGATTACATGGG
CAGCAAGTTCCGCCAGATGTATCTGATGCCAAAGGTTGAGATCGACGCGA
GTCGGTTCCAAGATATCGAGAAGGGCGGTCGTCGTGTCCTCCACTCTAAG
AACACCCACCTGCTTCATAAGTACCAGGATCGGGCTGCGCTCGAGCATTG
GAATATTATGCGTCATGTGCTGCCTGATTTTGTTTGGGAGAACTGGTGAC
GGTCTCGGTGTCGGCACCACGCCCTCTGCCCTGATCCACCACGGCATCGA
GACCACCATCGTGGAGATCGACCCTGTCGTGCACAAGTTCGCCACCGAAT
ACTTCCACCTTCCCTCGAACCACATCGCCGCCATCGAAGACGCCACCGCC
TTCGTGAAGCGCACTCCCCCAGCCCAGTATGACTATATCGTCCACGACGT
CTTCACCGGAGGCGCCGAGCCCCTCGAGCTCTTCACTCTCGAGTTCCTCG
AAGGCCTATCCTCCCTTCTCAAGGATGACGGAGTCATTGCCATCATGTCT
TCCCTGGCTGGTCTTGTCCAGCCCACCACCAGACAGCTGCTGACTGGCGC
TGCTCTGCTGTTTTTGACGGCGTTCTACTCGCCATTGACGGTGCTGATGC
TGACGCCAGTATATGGCTCGGCTCCTGCCCATATCTTCCACGGCTATGGA
GTGGCACTCATTGGCGCTGCTGGATGGTTCCTTAAAGACCACATCCAGCG
ATTGACTGGCCGCCGGGCTCTTTTCCTGCTCCCTGTTGTGGCATTCTGGG
TTCCTACCGTTCAGAGTTTCTTGTTCGCATCGAGCTCCGTTATGGGAAAC
CCCTTCGGAGCTGTAGTCACAGAGGTCATTTCCTACTACCCTCTGGTTCT
GCTCTCCGTGGCTTGTGCTGGTAAGCTGGTGCAGTCGGGTTTGAATCTGA
GCCAGCACGGTGATGCAGTCGCTGAGCACGTTCCTCTCGTGGTTACCTAT
ATCCTCTACAAGACTGGCGAGAAGTTCGCCAAAGCTTTCCTGGCCAAGTT
CATTGGAACTACCTTCTTCTTTTCTCGTGCTGGTCTCCAACTCTTGCTCC
CAGTCTTCTACACCGCTATTGCCCCTTCCAAGTTCCTGCTCTTTGCTATT
CCCTCCCTTCTGTTCTCCATGACGTCCAATGTCCACATGAACTCTGGAGC
ATTGAACTCTTTCCTCAATGACGAGGGATTCGCCCTTGTTGCCCGCCAGG
ACTCCACCACCGGTTACATCTCCGTCTTGGATAACCTGAATGATGGATTC
CGTGTCATGCGTTGCGACCACAGCTTGCTCGGCGGCCAGTGGACCAAGAT
GCCCCACAACTACAACCCTGCCGTTATGGACCCCATCTACTCGGTCTTCA
CCATGCTTGAGGCCGTCCGCCTGGTTGAAACTGACCACGGCGAGCCCCGC
GTAGATGCCAACAGCAAGGCACTTGTCATAACTATGCCGGCGACATCTCT
CTCTACCCCGCCGCCCTAACCGTCCGCACCATCCAATACGTCTTCCCGAC
CTGCCGCATCTTCCGCGAGGCCTCCGACTCTGACCTCACCGCCGACTTCA
CCAACATGGTGATCTTCTGCAAGAAGAGCTCCGCCACGCCGCTCACCTTC
CGCGACCCCGTTTCCGCCGATTACATGGGCAGCAAGTTCCGCCAGATGTA
TCTGATGCCAAAGGTTGAGATCGACGCGAGTCGGTTCCAAGATATCGAGA
AGGGCGGTCGTCGTGTCCTCCACTCTAAGAACACCCACCTGCTTCATAAG
TACCAGGATCGGGCTGCGCTCGAGCATTGGAATATTATGCGTCATGTGCT
GCCTGATTTTGTTTGGGAGAACTGGTGACGGTCTCGGTGTCGGCACCACG
CCCTCTGCCCTGATCCACCACGGCATCGAGACCACCATCGTGGAGATCGA
CCCTGTCGTGCACAAGTTCGCCACCGAATACTTCCACCTTCCCTCGAACC
ACATCGCCGCCATCGAAGACGCCACCGCCTTCGTGAAGCGCACTCCCCCA
GCCCAGTATGACTATATCGTCCACGACGTCTTCACCGGAGGCGCCGAGCC
CCTCGAGCTCTTCACTCTCGAGTTCCTCGAAGGCCTATCCTCCCTTCTCA
AGGATGACGGAGTCATTGCCATCATGTCTTCCCTGGCTGGTCTTGTCCAG
CCCACCACCAGACAGCTGCTGACTGGCGCTGCTCTGCTGTTTTTGACGGC
GTTCTACTCGCCATTGACGGTGCTGATGCTGACGCCAGTATATGGCTCGG
CTCCTGCCCATATCTTCCACGGCTATGGAGTGGCACTCATTGGCGCTGCT
GGATGGTTCCTTAAAGACCACATCCAGCGATTGACTGGCCGCCGGGCTCT
TTTCCTGCTCCCTGTTGTGGCATTCTGGGTTCCTACCGTTCAGAGTTTCT
TGTTCGCATCGAGCTCCGTTATGGGAAACCCCTTCGGAGCTGTAGTCACA
GAGGTCATTTCCTACTACCCTCTGGTTCTGCTCTCCGTGGCTTGTGCTGG
TAAGCTGGTGCAGTCGGGTTTGAATCTGAGCCAGCACGGTGATGCAGTCG
CTGAGCACGTTCCTCTCGTGGTTACCTATATCCTCTACAAGACTGGCGAG
AAGTTCGCCAAAGCTTTCCTGGCCAAGTTCATTGGAACTACCTTCTTCTT
TTCTCGTGCTGGTCTCCAACTCTTGCTCCCAGTCTTCTACACCGCTATTG
CCCCTTCCAAGTTCCTGCTCTTTGCTATTCCCTCCCTTCTGTTCTCCATG
ACGTCCAATGTCCACATGAACTCTGGAGCATTGAACTCTTTCCTCAATGA
CGAGGGATTCGCCCTTGTTGCCCGCCAGGACTCCACCACCGGTTACATCT
CCGTCTTGGATAACCTGAATGATGGATTCCGTGTCATGCGTTGCGACCAC
AGCTTGCTCGGCGGCCAGTGGACCAAGATGCCCCACAACTACAACCCTGC
CGTTATGGACCCCATCTACTCGGTCTTCACCATGCTTGAGGCCGTCCGCC
TGGTTGAAACTGACCACGGCGAGCCCCGCGTAGATGCCAACAGCAAGGCA
CTTGTCATAACTATGCCGGCGACATCTCTCTCTACCCCGCCGCCCTAACC
GTCCGCACCATCCAATACGTCTTCCCGACCTGCCGCATCTTCCGCGAGGC
CTCCGACTCTGACCTCACCGCCGACTTCACCAACATGGTGATCTTCTGCA
AGAAGAGCTCCGCCACGCCGCTCACCTTCCGCGACCCCGTTTCCGCCGAT
TACATGGGCAGCAAGTTCCGCCAGATGTATCTGATGCCAAAGGTTGAGAT
CGACGCGAGTCGGTTCCAAGATATCGAGAAGGGCGGTCGTCGTGTCCTCC
ACTCTAAGAACACCCACCTGCTTCATAAGTACCAGGATCGGGCTGCGCTC
GAGCATTGGAATATTATGCGTCATGTGCTGCCTGATTTTGTTTGGGAGAA
CTGGTGACGGTCTCGGTGTCGGCACCACGCCCTCTGCCCTGATCCACCAC
GGCATCGAGACCACCATCGTGGAGATCGACCCTGTCGTGCACAAGTTCGC
CACCGAATACTTCCACCTTCCCTCGAACCACATCGCCGCCATCGAAGACG
CCACCGCCTTCGTGAAGCGCACTCCCCCAGCCCAGTATGACTATATCGTC
CACGACGTCTTCACCGGAGGCGCCGAGCCCCTCGAGCTCTTCACTCTCGA
GTTCCTCGAAGGCCTATCCTCCCTTCTCAAGGATGACGGAGTCATTGCCA
TCATGTCTTCCCTGGCTGGTCTTGTCCAGCCCACCACCAGACAGCTGCTG
ACTGGCGCTGCTCTGCTGTTTTTGACGGCGTTCTACTCGCCATTGACGGT
GCTGATGCTGACGCCAGTATATGGCTCGGCTCCTGCCCATATCTTCCACG
GCTATGGAGTGGCACTCATTGGCGCTGCTGGATGGTTCCTTAAAGACCAC
ATCCAGCGATTGACTGGCCGCCGGGCTCTTTTCCTGCTCCCTGTTGTGGC
ATTCTGGGTTCCTACCGTTCAGAGTTTCTTGTTCGCATCGAGCTCCGTTA
TGGGAAACCCCTTCGGAGCTGTAGTCACAGAGGTCATTTCCTACTACCCT
CTGGTTCTGCTCTCCGTGGCTTGTGCTGGTAAGCTGGTGCAGTCGGGTTT
GAATCTGAGCCAGCACGGTGATGCAGTCGCTGAGCACGTTCCTCTCGTGG
TTACCTATATCCTCTACAAGACTGGCGAGAAGTTCGCCAAAGCTTTCCTG
GCCAAGTTCATTGGAACTACCTTCTTCTTTTCTCGTGCTGGTCTCCAACT
CTTGCTCCCAGTCTTCTACACCGCTATTGCCCCTTCCAAGTTCCTGCTCT
TTGCTATTCCCTCCCTTCTGTTCTCCATGACGTCCAATGTCCACATGAAC
TCTGGAGCATTGAACTCTTTCCTCAATGACGAGGGATTCGCCCTTGTTGC
CCGCCAGGACTCCACCACCGGTTACATCTCCGTCTTGGATAACCTGAATG
ATGGATTCCGTGTCATGCGTTGCGACCACAGCTTGCTCGGCGGCCAGTGG
ACCAAGATGCCCCACAACTACAACCCTGCCGTTATGGACCCCATCTACTC
GGTCTTCACCATGCTTGAGGCCGTCCGCCTGGTTGAAACTGACCACGGCG
AGCCCCGCGTAGATGCCAACAGCAAGGCACTTGTCAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004940-T1.utr3p1 | KJC3_004940-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF01564 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1175394..1177612 - |
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