|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1194298..1195588+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004949-T1 ID=KJC3_004949-T1|Name=KJC3_004949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1291bp|location=Sequence derived from alignment at ch4:1194298..1195588+ (Aspergillus niger KJC3)
ATGGATCCATCCATCAATCCATTCCATCTCCAGTTCTCATCTCACTCAAG
CCATACCCAACCCTCAGGTCTCCCTCATCCCCCATCCCTATCCCCATCCT
CCCTCCCCATGACCCCCTCCACCCCCACCGAATCGCACTGGCGATTCTCC
ACGGTAACAGGCTACTTCTACCAAAGCGAGCCCTCCACCGACCCCAACAC
CTTCAACTACGTACGTCCACTCCCAAATCCCCCTAAATTAACCCAAAAAC
TAATATCATACACCCAGGCATCCTCCGACTTCGGCCTCATCCCCCGCGCC
TACCCCACAGACGCGGACCTAGGCCCTGACCCAAAAACCACCTGGGAGCG
CTTCGCCCACCACGTCCGCACCCTGAACGCCCAATCTGCGGACCCTAATG
TCCGCTATAAGGTGCTCTTCCTCGGCCGCCATGGAGAGGGGTACCATAAT
GTAGCGGAGCGGGAGTACGGCACCGAAGAGTGGGATGTAAGCTGACCCCT
CTCTCTCCTGTTACCATTTTTGCAACCCAGACCCCTTTTTCCAAAAGTAA
AATTCCATGAATGATTGACATTGAAATCGAAAGAAACATTACTCCCTCCT
CCCCGGCAATGCAACAAGCAACTGGGTTGACGCCCGTCTCACAGACGTAG
GCAAATCACAAGCCCAAACCGCGCACAATACCTGGAAACAGCAACTCAAG
GAACATATCCCCACTCCGGAGAAATTCTACGTCAGTCCGTTGAATAGGTG
TCTTCAGACGGCGTGGATTACTTTCGTTGGAACGGGGATTGAGGGGACGG
AGCCGTTTAGGCCGGTTGTTAAGGAGGTATATCTATCTAACCATCCATCC
CCTATCTATACCTTCCTTCTTGTCATGACGGACTAATTAATAACTGGGTG
CCAGCTCCTCCGCGAAACCATCGGCCAACACACTTGCGACAGCCGGTCCA
GCAAGACAGCCATCATGACCGAATACCCAACGTACATCATCGAAGAAGGG
TTCGCCGAGAACGACGAGATGTATGATGCCGAGCTCCGGGAATCTGATTC
GGCGCGGGACAAGCGCTTCCGCGATCTGATGCAGGATATCTTTTCCACGG
ATGAGGATAAGATCTTCTTGTCGTTGACGGCGCATTCGGGCGCCATTACG
AGTCTTTTGAATGTCTTTGGACATCGGAGGTTTTCGCCTCTTGAGACCGG
GGGCGTGATCCCGGTTTTTGTACGTGGGGAGAGGGTGATGGGGCCGTTGC
CGGTCATGGAGGTGGAGCCGTGGTTTGGGGTTCCTAAGTAA back to topCoding sequence (CDS) from alignment at ch4:1194298..1195588+ >KJC3_004949-T1 ID=KJC3_004949-T1|Name=KJC3_004949-T1|organism=Aspergillus niger KJC3|type=CDS|length=4236bp|location=Sequence derived from alignment at ch4:1194298..1195588+ (Aspergillus niger KJC3)
ATGGATCCATCCATCAATCCATTCCATCTCCAGTTCTCATCTCACTCAAG
CCATACCCAACCCTCAGGTCTCCCTCATCCCCCATCCCTATCCCCATCCT
CCCTCCCCATGACCCCCTCCACCCCCACCGAATCGCACTGGCGATTCTCC
ACGGTAACAGGCTACTTCTACCAAAGCGAGCCCTCCACCGACCCCAACAC
CTTCAACTACGCATCCTCCGACTTCGGCCTCATCCCCCGCGCCTACCCCA
CAGACGCGGACCTAGGCCCTGACCCAAAAACCACCTGGGAGCGCTTCGCC
CACCACGTCCGCACCCTGAACGCCCAATCTGCGGACCCTAATGTCCGCTA
TAAGGTGCTCTTCCTCGGCCGCCATGGAGAGGGGTACCATAATGTAGCGG
AGCGGGAGTACGGCACCGAAGAGTGGGATAAACATTACTCCCTCCTCCCC
GGCAATGCAACAAGCAACTGGGTTGACGCCCGTCTCACAGACGTAGGCAA
ATCACAAGCCCAAACCGCGCACAATACCTGGAAACAGCAACTCAAGGAAC
ATATCCCCACTCCGGAGAAATTCTACGTCAGTCCGTTGAATAGGTGTCTT
CAGACGGCGTGGATTACTTTCGTTGGAACGGGGATTGAGGGGACGGAGCC
GTTTAGGCCGGTTGTTAAGGAGCTCCTCCGCGAAACCATCGGCCAACACA
CTTGCGACAGCCGGTCCAGCAAGACAGCCATCATGACCGAATACCCAACG
TACATCATCGAAGAAGGGTTCGCCGAGAACGACGAGATGTATGATGCCGA
GCTCCGGGAATCTGATTCGGCGCGGGACAAGCGCTTCCGCGATCTGATGC
AGGATATCTTTTCCACGGATGAGGATAAGATCTTCTTGTCGTTGACGGCG
CATTCGGGCGCCATTACGAGTCTTTTGAATGTCTTTGGACATCGGAGGTT
TTCGCCTCTTGAGACCGGGGGCGTGATCCCGGTTTTTGTACGTGGGGAGA
GGGTGATGGGGCCGTTGCCGGTCATGGAGGTGGAGCCGTGGTTTGGGGTT
CCTAAGTAAATGGATCCATCCATCAATCCATTCCATCTCCAGTTCTCATC
TCACTCAAGCCATACCCAACCCTCAGGTCTCCCTCATCCCCCATCCCTAT
CCCCATCCTCCCTCCCCATGACCCCCTCCACCCCCACCGAATCGCACTGG
CGATTCTCCACGGTAACAGGCTACTTCTACCAAAGCGAGCCCTCCACCGA
CCCCAACACCTTCAACTACGCATCCTCCGACTTCGGCCTCATCCCCCGCG
CCTACCCCACAGACGCGGACCTAGGCCCTGACCCAAAAACCACCTGGGAG
CGCTTCGCCCACCACGTCCGCACCCTGAACGCCCAATCTGCGGACCCTAA
TGTCCGCTATAAGGTGCTCTTCCTCGGCCGCCATGGAGAGGGGTACCATA
ATGTAGCGGAGCGGGAGTACGGCACCGAAGAGTGGGATAAACATTACTCC
CTCCTCCCCGGCAATGCAACAAGCAACTGGGTTGACGCCCGTCTCACAGA
CGTAGGCAAATCACAAGCCCAAACCGCGCACAATACCTGGAAACAGCAAC
TCAAGGAACATATCCCCACTCCGGAGAAATTCTACGTCAGTCCGTTGAAT
AGGTGTCTTCAGACGGCGTGGATTACTTTCGTTGGAACGGGGATTGAGGG
GACGGAGCCGTTTAGGCCGGTTGTTAAGGAGCTCCTCCGCGAAACCATCG
GCCAACACACTTGCGACAGCCGGTCCAGCAAGACAGCCATCATGACCGAA
TACCCAACGTACATCATCGAAGAAGGGTTCGCCGAGAACGACGAGATGTA
TGATGCCGAGCTCCGGGAATCTGATTCGGCGCGGGACAAGCGCTTCCGCG
ATCTGATGCAGGATATCTTTTCCACGGATGAGGATAAGATCTTCTTGTCG
TTGACGGCGCATTCGGGCGCCATTACGAGTCTTTTGAATGTCTTTGGACA
TCGGAGGTTTTCGCCTCTTGAGACCGGGGGCGTGATCCCGGTTTTTGTAC
GTGGGGAGAGGGTGATGGGGCCGTTGCCGGTCATGGAGGTGGAGCCGTGG
TTTGGGGTTCCTAAGTAAATGGATCCATCCATCAATCCATTCCATCTCCA
GTTCTCATCTCACTCAAGCCATACCCAACCCTCAGGTCTCCCTCATCCCC
CATCCCTATCCCCATCCTCCCTCCCCATGACCCCCTCCACCCCCACCGAA
TCGCACTGGCGATTCTCCACGGTAACAGGCTACTTCTACCAAAGCGAGCC
CTCCACCGACCCCAACACCTTCAACTACGCATCCTCCGACTTCGGCCTCA
TCCCCCGCGCCTACCCCACAGACGCGGACCTAGGCCCTGACCCAAAAACC
ACCTGGGAGCGCTTCGCCCACCACGTCCGCACCCTGAACGCCCAATCTGC
GGACCCTAATGTCCGCTATAAGGTGCTCTTCCTCGGCCGCCATGGAGAGG
GGTACCATAATGTAGCGGAGCGGGAGTACGGCACCGAAGAGTGGGATAAA
CATTACTCCCTCCTCCCCGGCAATGCAACAAGCAACTGGGTTGACGCCCG
TCTCACAGACGTAGGCAAATCACAAGCCCAAACCGCGCACAATACCTGGA
AACAGCAACTCAAGGAACATATCCCCACTCCGGAGAAATTCTACGTCAGT
CCGTTGAATAGGTGTCTTCAGACGGCGTGGATTACTTTCGTTGGAACGGG
GATTGAGGGGACGGAGCCGTTTAGGCCGGTTGTTAAGGAGCTCCTCCGCG
AAACCATCGGCCAACACACTTGCGACAGCCGGTCCAGCAAGACAGCCATC
ATGACCGAATACCCAACGTACATCATCGAAGAAGGGTTCGCCGAGAACGA
CGAGATGTATGATGCCGAGCTCCGGGAATCTGATTCGGCGCGGGACAAGC
GCTTCCGCGATCTGATGCAGGATATCTTTTCCACGGATGAGGATAAGATC
TTCTTGTCGTTGACGGCGCATTCGGGCGCCATTACGAGTCTTTTGAATGT
CTTTGGACATCGGAGGTTTTCGCCTCTTGAGACCGGGGGCGTGATCCCGG
TTTTTGTACGTGGGGAGAGGGTGATGGGGCCGTTGCCGGTCATGGAGGTG
GAGCCGTGGTTTGGGGTTCCTAAGTAAATGGATCCATCCATCAATCCATT
CCATCTCCAGTTCTCATCTCACTCAAGCCATACCCAACCCTCAGGTCTCC
CTCATCCCCCATCCCTATCCCCATCCTCCCTCCCCATGACCCCCTCCACC
CCCACCGAATCGCACTGGCGATTCTCCACGGTAACAGGCTACTTCTACCA
AAGCGAGCCCTCCACCGACCCCAACACCTTCAACTACGCATCCTCCGACT
TCGGCCTCATCCCCCGCGCCTACCCCACAGACGCGGACCTAGGCCCTGAC
CCAAAAACCACCTGGGAGCGCTTCGCCCACCACGTCCGCACCCTGAACGC
CCAATCTGCGGACCCTAATGTCCGCTATAAGGTGCTCTTCCTCGGCCGCC
ATGGAGAGGGGTACCATAATGTAGCGGAGCGGGAGTACGGCACCGAAGAG
TGGGATAAACATTACTCCCTCCTCCCCGGCAATGCAACAAGCAACTGGGT
TGACGCCCGTCTCACAGACGTAGGCAAATCACAAGCCCAAACCGCGCACA
ATACCTGGAAACAGCAACTCAAGGAACATATCCCCACTCCGGAGAAATTC
TACGTCAGTCCGTTGAATAGGTGTCTTCAGACGGCGTGGATTACTTTCGT
TGGAACGGGGATTGAGGGGACGGAGCCGTTTAGGCCGGTTGTTAAGGAGC
TCCTCCGCGAAACCATCGGCCAACACACTTGCGACAGCCGGTCCAGCAAG
ACAGCCATCATGACCGAATACCCAACGTACATCATCGAAGAAGGGTTCGC
CGAGAACGACGAGATGTATGATGCCGAGCTCCGGGAATCTGATTCGGCGC
GGGACAAGCGCTTCCGCGATCTGATGCAGGATATCTTTTCCACGGATGAG
GATAAGATCTTCTTGTCGTTGACGGCGCATTCGGGCGCCATTACGAGTCT
TTTGAATGTCTTTGGACATCGGAGGTTTTCGCCTCTTGAGACCGGGGGCG
TGATCCCGGTTTTTGTACGTGGGGAGAGGGTGATGGGGCCGTTGCCGGTC
ATGGAGGTGGAGCCGTGGTTTGGGGTTCCTAAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029033 |
| DBxref | InterPro:IPR013078 |
| DBxref | PFAM:PF00300 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1194298..1195588 + |
|
