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KJC3_004950-T1, KJC3_004950-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004950-T1
Unique NameKJC3_004950-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1195115..1197310-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004950-T1 ID=KJC3_004950-T1|Name=KJC3_004950-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2196bp|location=Sequence derived from alignment at ch4:1195115..1197310- (Aspergillus niger KJC3)
AAAAGCCTTACCCCGTGATTGGCAGGACCGGGATTCCCTTTCCAGCCAAA
GCCACATGATCCCGCCGCGGCTTACCCTTCCAAAAACTGACTAGCGCCTG
CCTTGCGGCTTGGAATCTTGACCCCGGAATTCTCAGGTGTCGAGGCAGCA
ACATCCGGCGTACCGGACAGACCCGAGACGCACCGCCAAGGCCCAGTCTT
CATCCCGACACTTTTTTCCCTCTGATCTCCGGACCCCGTGCAATCACCTC
CAGATTCATCGTCCGTCATGGCCTCAATGGGTGCTGTCCCCCAGTATGGG
CAGCTGATCCGGTCCAGTAAGTACCTGCAAGACGAATAACCCTGTTTTCT
CCCCAATTGTGCCCCCTCTCATTCTCACCTCTCCCCTGCAGTCTCTTCAG
CCCGGACCGGCCTGACCTACGTCCCTCGCCGCACTCTGGCCTACACTGTC
CCTCGTCAAGCCTCCGAAGACGGTCCCAACGGTCCTAATGACAAGTCCGA
GTCCGAATCCAAGCCCTCCACTTTGTCCTCGATCAAGAACTTCTTCTTCG
GCGGCAAGCCCGGCGCCGCCAAGCCCAAAGCTCGCCGCACCACCGCTCCC
GCCAAACGCGAGGGTTCCCTGAGCGCCGACTCCATCTTCGCAGAGGATGA
AGCCAGCCCCAAGCTGGTGGCGTCCGGCCGTACCCCCGCCGCTCGCAAGC
AAGCCGGCGCCCCCGAGGAGGGCCAGGAAGAGGTCGACTATGCTGTTGAC
CGACGAAACCGGGAGACGATGCAGACAGTGCTGGACCCGAACCCCAAGGC
GCGGACTCGCTGGGAACAAAAGATGGTTGCTCGCGAGATCCGTCGTCGAG
GCCGCATCTCGCCCACCGAGCTGATCATGCGGACGGAGCGCGAGTCCCTC
TCCAAGTCCCATTGGTTCAAGACCTCCGTCAAGAAGCTGGGTCCCCTTGC
TCGCCAGATTGCCGGCAAGAACATCGACGATGCCATGCTGCAGATGCGCC
TGAGCAAGAAGAAGGCCGCCAAAGAGGTCCTCCAGCACCTCGAGCATGCT
AAGAACGTCGCCGTGGTGCGTTCTGGTATGGGCCTGGGTGCCGTCGAGGG
CAAGACCGCCAACCAGAAGCCTGTCACCATCACCCTCAAGAACGGAGAGC
GCAAGACCATCAACGACCCTACTTCCATCTACATCGACCAAGCGTGGGTT
AACCGTGGCCCGTACGGTTACGACTACGACCACCGCGCGCGCGGCAACAT
CAACCTCATGCGTCCGCCGTACACCTCTCTGTCGGTGGTGCTGAAGGAAG
AGCAGACACGTATCCGTCAATGGCAGAACCGGGAGTCCGAGGAGCTGCGT
AAGCGCAAGGCTAAGCTCTGGACGCCGCTGCCGGACCGTAAGATTACGGC
GCAGAACCAGTTCTACAGCTGGTGATCAATGTTTCGATTATAAGTTTTCG
GCGTTGTTTTCTGTTCAATATTCCTAGACCGTTAAGAAGCACTTTTTCCT
CTCTGGTGGATTTTCTCAGCATGTGTTTTAAAAACCCTTTTCTTGGTTAC
CTTCCCCCCGTGTCTCTATCTTAACGTGCGTGTATGATGAGGGTTGCTTC
GATCCAAGAATCAATGTACAATACAATATCTATCATCTACTACATACTTC
TTTCAACTCTCTCTACCTCTCTCACTCTTTCTATATGCAGAACCTTTCCA
AACATCACAATTAATCCGTAGATTACTTAGGAACCCCAAACCACGGCTCC
ACCTCCATGACCGGCAACGGCCCCATCACCCTCTCCCCACGTACAAAAAC
CGGGATCACGCCCCCGGTCTCAAGAGGCGAAAACCTCCGATGTCCAAAGA
CATTCAAAAGACTCGTAATGGCGCCCGAATGCGCCGTCAACGACAAGAAG
ATCTTATCCTCATCCGTGGAAAAGATATCCTGCATCAGATCGCGGAAGCG
CTTGTCCCGCGCCGAATCAGATTCCCGGAGCTCGGCATCATACATCTCGT
CGTTCTCGGCGAACCCTTCTTCGATGATGTACGTTGGGTATTCGGTCATG
ATGGCTGTCTTGCTGGACCGGCTGTCGCAAGTGTGTTGGCCGATGGTTTC
GCGGAGGAGCTGGCACCCAGTTATTAATTAGTCCGTCATGACAAGAAGGA
AGGTATAGATAGGGGATGGATGGTTAGATAGATATACCTCCTTAAC
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Coding sequence (CDS) from alignment at ch4:1195115..1197310-

>KJC3_004950-T1 ID=KJC3_004950-T1|Name=KJC3_004950-T1|organism=Aspergillus niger KJC3|type=CDS|length=2166bp|location=Sequence derived from alignment at ch4:1195115..1197310- (Aspergillus niger KJC3)
TCTCTTCAGCCCGGACCGGCCTGACCTACGTCCCTCGCCGCACTCTGGCC
TACACTGTCCCTCGTCAAGCCTCCGAAGACGGTCCCAACGGTCCTAATGA
CAAGTCCGAGTCCGAATCCAAGCCCTCCACTTTGTCCTCGATCAAGAACT
TCTTCTTCGGCGGCAAGCCCGGCGCCGCCAAGCCCAAAGCTCGCCGCACC
ACCGCTCCCGCCAAACGCGAGGGTTCCCTGAGCGCCGACTCCATCTTCGC
AGAGGATGAAGCCAGCCCCAAGCTGGTGGCGTCCGGCCGTACCCCCGCCG
CTCGCAAGCAAGCCGGCGCCCCCGAGGAGGGCCAGGAAGAGGTCGACTAT
GCTGTTGACCGACGAAACCGGGAGACGATGCAGACAGTGCTGGACCCGAA
CCCCAAGGCGCGGACTCGCTGGGAACAAAAGATGGTTGCTCGCGAGATCC
GTCGTCGAGGCCGCATCTCGCCCACCGAGCTGATCATGCGGACGGAGCGC
GAGTCCCTCTCCAAGTCCCATTGGTTCAAGACCTCCGTCAAGAAGCTGGG
TCCCCTTGCTCGCCAGATTGCCGGCAAGAACATCGACGATGCCATGCTGC
AGATGCGCCTGAGCAAGAAGAAGGCCGCCAAAGAGGTCCTCCAGCACCTC
GAGCATGCTAAGAACGTCGCCGTGGTGCGTTCTGGTATGGGCCTGGGTGC
CGTCGAGGGCAAGACCGCCAACCAGAAGCCTGTCACCATCACCCTCAAGA
ACGGAGAGCGCAAGACCATCAACGACCCTACTTCCATCTACATCGACCAA
GCGTGGGTTAACCGTGGCCCGTACGGTTACGACTACGACCACCGCGCGCG
CGGCAACATCAACCTCATGCGTCCGCCGTACACCTCTCTGTCGGTGGTGC
TGAAGGAAGAGCAGACACGTATCCGTCAATGGCAGAACCGGGAGTCCGAG
GAGCTGCGTAAGCGCAAGGCTAAGCTCTGGACGCCGCTGCCGGACCGTAA
GATTACGGCGCAGAACCAGTTCTACAGCTGGTGAATGGCCTCAATGGGTG
CTGTCCCCCAGTATGGGCAGCTGATCCGGTCCATCTCTTCAGCCCGGACC
GGCCTGACCTACGTCCCTCGCCGCACTCTGGCCTACACTGTCCCTCGTCA
AGCCTCCGAAGACGGTCCCAACGGTCCTAATGACAAGTCCGAGTCCGAAT
CCAAGCCCTCCACTTTGTCCTCGATCAAGAACTTCTTCTTCGGCGGCAAG
CCCGGCGCCGCCAAGCCCAAAGCTCGCCGCACCACCGCTCCCGCCAAACG
CGAGGGTTCCCTGAGCGCCGACTCCATCTTCGCAGAGGATGAAGCCAGCC
CCAAGCTGGTGGCGTCCGGCCGTACCCCCGCCGCTCGCAAGCAAGCCGGC
GCCCCCGAGGAGGGCCAGGAAGAGGTCGACTATGCTGTTGACCGACGAAA
CCGGGAGACGATGCAGACAGTGCTGGACCCGAACCCCAAGGCGCGGACTC
GCTGGGAACAAAAGATGGTTGCTCGCGAGATCCGTCGTCGAGGCCGCATC
TCGCCCACCGAGCTGATCATGCGGACGGAGCGCGAGTCCCTCTCCAAGTC
CCATTGGTTCAAGACCTCCGTCAAGAAGCTGGGTCCCCTTGCTCGCCAGA
TTGCCGGCAAGAACATCGACGATGCCATGCTGCAGATGCGCCTGAGCAAG
AAGAAGGCCGCCAAAGAGGTCCTCCAGCACCTCGAGCATGCTAAGAACGT
CGCCGTGGTGCGTTCTGGTATGGGCCTGGGTGCCGTCGAGGGCAAGACCG
CCAACCAGAAGCCTGTCACCATCACCCTCAAGAACGGAGAGCGCAAGACC
ATCAACGACCCTACTTCCATCTACATCGACCAAGCGTGGGTTAACCGTGG
CCCGTACGGTTACGACTACGACCACCGCGCGCGCGGCAACATCAACCTCA
TGCGTCCGCCGTACACCTCTCTGTCGGTGGTGCTGAAGGAAGAGCAGACA
CGTATCCGTCAATGGCAGAACCGGGAGTCCGAGGAGCTGCGTAAGCGCAA
GGCTAAGCTCTGGACGCCGCTGCCGGACCGTAAGATTACGGCGCAGAACC
AGTTCTACAGCTGGTGAATGGCCTCAATGGGTGCTGTCCCCCAGTATGGG
CAGCTGATCCGGTCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004950KJC3_004950Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004950-T1KJC3_004950-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004950-T1.cdsKJC3_004950-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004950-T1.utr3p1KJC3_004950-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004950-T1.exon2KJC3_004950-T1.exon2Aspergillus niger KJC3exon
KJC3_004950-T1.exon1KJC3_004950-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004950-T1.utr5p1KJC3_004950-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264LC7
DBxrefInterPro:IPR001063
DBxrefInterPro:IPR036394
DBxrefPFAM:PF00237
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1195115..1197310 -
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