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KJC3_004958-T1, KJC3_004958-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004958-T1
Unique NameKJC3_004958-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1210153..1211778-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004958-T1 ID=KJC3_004958-T1|Name=KJC3_004958-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1626bp|location=Sequence derived from alignment at ch4:1210153..1211778- (Aspergillus niger KJC3)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAGACCTTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGACGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGATTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCCCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTTCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTCATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
GAACCGGTCCGCTATGATATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCTCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTCGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCAAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGATCAGGTGC
TGCGCTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAACCGCGACGAGGTGACGCT
GCAGCCCGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGGCTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA
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Coding sequence (CDS) from alignment at ch4:1210153..1211778-

>KJC3_004958-T1 ID=KJC3_004958-T1|Name=KJC3_004958-T1|organism=Aspergillus niger KJC3|type=CDS|length=1626bp|location=Sequence derived from alignment at ch4:1210153..1211778- (Aspergillus niger KJC3)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAGACCTTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGACGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGATTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCCCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTTCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTCATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
GAACCGGTCCGCTATGATATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCTCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTCGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCAAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGATCAGGTGC
TGCGCTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAACCGCGACGAGGTGACGCT
GCAGCCCGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGGCTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004958KJC3_004958Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004958-T1.cdsKJC3_004958-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004958-T1.exon1KJC3_004958-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004958-T1KJC3_004958-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261MMR
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR018983
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF09384
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1210153..1211778 -
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