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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1214627..1217523+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004959-T1 ID=KJC3_004959-T1|Name=KJC3_004959-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2897bp|location=Sequence derived from alignment at ch4:1214627..1217523+ (Aspergillus niger KJC3)
CCTTTCTCCCCTCCCTGCACTCATTTCTGCAAAACAACTTCACGCGAAAC
GAACTGGTCTCTCGTTTACTATTACTGCTCTACCTTGCTGCTCCACATCT
GAAAAACAAAACCATCCAACCAACGCTCATCTGTCCTTCGTTACTCTCCT
TCACGTTCTCTGTCAATCCACCCCAAACCGAACTGCGTCTTGTCACTCCT
TCATTATATTTCTCCCTAGGATAGTCTAGCAACATGATGGACGCCAGAGT
CCCGAAGCGGGGCTTAATGGCAATGGGTCATACTGCTCATGCAGCGGGCA
TTTTCGCGGATATGTCCGTGGATGGCCCAATTATTGGCACGTTGGTGGTC
GTCGCCGACCGGGCCAAAAACCTACCAAACAGAAAAACAATGGGCAAGCA
GAATCCTTACTGTGCTGCGCGCCTTGGAAAAGAAGCAAAGAAAACTGGCA
CAGACCTGCGAGGTGGTCAAACTCCCAAATGGTATGTATCTTGCCACCAT
TTGAACTCGGACGTCATATAGACGGTGCTGACTGACGTAGGGATGATGAA
CTTCGCTTCAACGTACACGAATCTCCAGACTACTATAGACTCAAAGTCTC
CGTATTCAACGATGAGAAGAAGACCGATCTCATTGGAGAGACGTGGGTCG
ATCTGAGTGATCTGATCATTCCGGGCGGCAGCCAGAACGACCACTGGCAT
CCCTTGCAATACCGTGGAAAATACGCTGGCGAAGTCAGACTTGAAATGAC
CTACTATGATACGAGGCCCGAAGATGAAGCGGTGATCGAAAGAAGAACTC
CCGCAGCTGAGAAGTCTCACCACCCGAAGAAGGTTGCATCTTTCAGCTCA
GGTCCAGTGCCGGCTAGCCCTGGTACCCTCTCCGGTCCCAGGCAGTTGAA
AGATGTCAAAAGACGCCCGCTCCCTTCAGATCCTCGCCCGAGATCCTCGG
CGCACTCAAGCACATCGAGTAGCTCACCGGTTCGTGCCAATGATAGCACG
AACTCGGCTGCATCCTTCAACCACCACAGCAACCACAACCACCATCAAGA
CCTCAGACAGCCAAGAGTGGATAACAGCAGCTCTGGAATGAGCGATAGCA
CCACCTCGCTTCCTACATACAATCATAGAGAATATGCAAACCCGCAACGA
CTGGATAGCAACAGTTTAGTCGTTGGCACTCCCACGGGATCCTACCACTC
GAATCCCTGTCCCTACCCTATCACTTCTTCGGACAGCGGTTCAGGTGCCA
CTCATAGCACGACTTCGTTGCCAAATTATCAGAATAATGAGTACTCGAGG
CCTCATGTTGAGCATAGCAATCCGCCGATGAGCGACAGCTCCAGCCTGCT
TCCACTCCTTCCAAACCCTCACCGAATTGAGTACGCTAGCCAGGCGCCGC
CTCACAGTAGCAGCAATTCACTCGTCGGCAATGCCACGAGCTCGTACAAT
ACGAGTTCATGTCCTTCTTATCACGCTGAATACACAAAAATACCAGACAG
CAGTTCGTTTGCCTCGACAAGCTCAAGTGCGCAACAGCCGGCCTACGGGC
ATTATCGTGAATATGCACAAATTGGATATACCCCCCCACTTCTCACCGAC
AGTCAGCCGTCTTCCCTGTCATACGCGATGATGCAACCCCGTGTTGAGGA
CGAAGAAGAAGACGGACTACCACCCCCTCCACCTGCCCATCGCTCAGGAC
TGGTGCCAACCAGCCAGCCAGTGCCAGTGGTACCCAACCCTGTCCCTCAG
GCGTACACGCAACCAGCTCCTCTGCCGCAGGTTACCATGCCTGAGCCGAT
GGAAAAGCCTGCTTCGGACAACAGTCTGTATACGACCCCGTCGTGGGATC
CCAATTGGGACTATCCCAGAGGCAGACGGGAGGAAAAGGTCGTGGCCACA
ACAAACGCGGTGCCAGCAAGTCTAGTCCCTGGTTTTGATCCAGTACTTGC
AGCAGCCGAATCGGATCGCGCGGCGTATGAGCGAGAAATCAGACGAAGGA
GCGGTAACTTCGATGAGAATCCGCTGCAAATGGTTCATAAGCCAGTTGAT
GACCACAGGAGGCATTCTCATGGTATCTACGACGAAAATCCTCTGAAGAA
ACCTCATGATACCCGGTCTCTTGTGAGTCGAACTTCGACAGCCCCGAATA
ATCAACTTGTCCCCCGAAGAAAATCAGTCAGCCCCCGACCCCCTTCGATG
AGGGGCCGGGAGGTGTCTCCTGTTCCATTCTCTCCCGATTCCTACCTGCC
TGAAGCGGCGCGAGAGCCAGCAGCGCGAGAATCAGGCCCCATTATAGGGG
ATGATGGTCGAGAAATCGATCCTTCCGACCACTTGCCTACCAATACCTGG
GCCCCCGAGCCCGAACGAAAAACCAAAAAGCCGGGAGTTGTTGTGCGTTT
CCGCAGCCCCGTTCATCGAGACAGTCCACCCAAGGACTACGGACATCGCA
AGTCCATGTCCGAAGCATACTCTAATTCTCCCTCAAGGCTATATGCCGAG
GCAAACAACCCACCTATACCATCTAAGGTCCCTGTCGGCCTCCCAACCAA
AAGTTATGGAAACATTGATCAAAGCTACGATGCTCTGAGCCGAGAGCTCA
ATACGATAGATATTGGAGGATCTGGTCGAGGCATGAAAAGATATGCCCTT
AGTTACGTGTCTTAGATAGATACTTTTTTTTCTCTTTTGCTCTTGCGTGT
TATGGTTTGATGACAGCGATGTGCTGCATCTTTCTTTTCTCTAGATAGGA
TGATTTTCTTTTCTTGTCTCTGGCAGGTTCAAGTGTTTGCTTTAGATAGC
TTTCTTTCATGTCTTTTCTTTCGGTTTAGGTAGCTTTTCATTCTTATGTC
AGATAGCTAGCTATCTTTATGATACCAATGTTACTCATCAAAAGGTC back to topCoding sequence (CDS) from alignment at ch4:1214627..1217523+ >KJC3_004959-T1 ID=KJC3_004959-T1|Name=KJC3_004959-T1|organism=Aspergillus niger KJC3|type=CDS|length=4746bp|location=Sequence derived from alignment at ch4:1214627..1217523+ (Aspergillus niger KJC3)
ATGATGGACGCCAGAGTCCCGAAGCGGGGCTTAATGGCAATGGGTCATAC
TGCTCATGCAGCGGGCATTTTCGCGGATATGTCCGTGGATGGCCCAATTA
TTGGCACGTTGGTGGTCGTCGCCGACCGGGCCAAAAACCTACCAAACAGA
AAAACAATGGGCAAGCAGAATCCTTACTGTGCTGCGCGCCTTGGAAAAGA
AGCAAAGAAAACTGGCACAGACCTGCGAGGTGGTCAAACTCCCAAATGGG
ATGATGAACTTCGCTTCAACGTACACGAATCTCCAGACTACTATAGACTC
AAAGTCTCCGTATTCAACGATGAGAAGAAGACCGATCTCATTGGAGAGAC
GTGGGTCGATCTGAGTGATCTGATCATTCCGGGCGGCAGCCAGAACGACC
ACTGGCATCCCTTGCAATACCGTGGAAAATACGCTGGCGAAGTCAGACTT
GAAATGACCTACTATGATACGAGGCCCGAAGATGAAGCGGTGATCGAAAG
AAGAACTCCCGCAGCTGAGAAGTCTCACCACCCGAAGAAGGTTGCATCTT
TCAGCTCAGGTCCAGTGCCGGCTAGCCCTGGTACCCTCTCCGGTCCCAGG
CAGTTGAAAGATGTCAAAAGACGCCCGCTCCCTTCAGATCCTCGCCCGAG
ATCCTCGGCGCACTCAAGCACATCGAGTAGCTCACCGGTTCGTGCCAATG
ATAGCACGAACTCGGCTGCATCCTTCAACCACCACAGCAACCACAACCAC
CATCAAGACCTCAGACAGCCAAGAGTGGATAACAGCAGCTCTGGAATGAG
CGATAGCACCACCTCGCTTCCTACATACAATCATAGAGAATATGCAAACC
CGCAACGACTGGATAGCAACAGTTTAGTCGTTGGCACTCCCACGGGATCC
TACCACTCGAATCCCTGTCCCTACCCTATCACTTCTTCGGACAGCGGTTC
AGGTGCCACTCATAGCACGACTTCGTTGCCAAATTATCAGAATAATGAGT
ACTCGAGGCCTCATGTTGAGCATAGCAATCCGCCGATGAGCGACAGCTCC
AGCCTGCTTCCACTCCTTCCAAACCCTCACCGAATTGAGTACGCTAGCCA
GGCGCCGCCTCACAGTAGCAGCAATTCACTCGTCGGCAATGCCACGAGCT
CGTACAATACGAGTTCATGTCCTTCTTATCACGCTGAATACACAAAAATA
CCAGACAGCAGTTCGTTTGCCTCGACAAGCTCAAGTGCGCAACAGCCGGC
CTACGGGCATTATCGTGAATATGCACAAATTGGATATACCCCCCCACTTC
TCACCGACAGTCAGCCGTCTTCCCTGTCATACGCGATGATGCAACCCCGT
GTTGAGGACGAAGAAGAAGACGGACTACCACCCCCTCCACCTGCCCATCG
CTCAGGACTGGTGCCAACCAGCCAGCCAGTGCCAGTGGTACCCAACCCTG
TCCCTCAGGCGTACACGCAACCAGCTCCTCTGCCGCAGGTTACCATGCCT
GAGCCGATGGAAAAGCCTGCTTCGGACAACAGTCTGTATACGACCCCGTC
GTGGGATCCCAATTGGGACTATCCCAGAGGCAGACGGGAGGAAAAGGTCG
TGGCCACAACAAACGCGGTGCCAGCAAGTCTAGTCCCTGGTTTTGATCCA
GTACTTGCAGCAGCCGAATCGGATCGCGCGGCGTATGAGCGAGAAATCAG
ACGAAGGAGCGGTAACTTCGATGAGAATCCGCTGCAAATGGTTCATAAGC
CAGTTGATGACCACAGGAGGCATTCTCATGGTATCTACGACGAAAATCCT
CTGAAGAAACCTCATGATACCCGGTCTCTTGTGAGTCGAACTTCGACAGC
CCCGAATAATCAACTTGTCCCCCGAAGAAAATCAGTCAGCCCCCGACCCC
CTTCGATGAGGGGCCGGGAGGTGTCTCCTGTTCCATTCTCTCCCGATTCC
TACCTGCCTGAAGCGGCGCGAGAGCCAGCAGCGCGAGAATCAGGCCCCAT
TATAGGGGATGATGGTCGAGAAATCGATCCTTCCGACCACTTGCCTACCA
ATACCTGGGCCCCCGAGCCCGAACGAAAAACCAAAAAGCCGGGAGTTGTT
GTGCGTTTCCGCAGCCCCGTTCATCGAGACAGTCCACCCAAGGACTACGG
ACATCGCAAGTCCATGTCCGAAGCATACTCTAATTCTCCCTCAAGGCTAT
ATGCCGAGGCAAACAACCCACCTATACCATCTAAGGTCCCTGTCGGCCTC
CCAACCAAAAGTTATGGAAACATTGATCAAAGCTACGATGCTCTGAGCCG
AGAGCTCAATACGATAGATATTGGAGGATCTGGTCGAGGCATGAAAAGAT
ATGCCCTTAGTTACGTGTCTTAGATGATGGACGCCAGAGTCCCGAAGCGG
GGCTTAATGGCAATGGGTCATACTGCTCATGCAGCGGGCATTTTCGCGGA
TATGTCCGTGGATGGCCCAATTATTGGCACGTTGGTGGTCGTCGCCGACC
GGGCCAAAAACCTACCAAACAGAAAAACAATGGGCAAGCAGAATCCTTAC
TGTGCTGCGCGCCTTGGAAAAGAAGCAAAGAAAACTGGCACAGACCTGCG
AGGTGGTCAAACTCCCAAATGGGATGATGAACTTCGCTTCAACGTACACG
AATCTCCAGACTACTATAGACTCAAAGTCTCCGTATTCAACGATGAGAAG
AAGACCGATCTCATTGGAGAGACGTGGGTCGATCTGAGTGATCTGATCAT
TCCGGGCGGCAGCCAGAACGACCACTGGCATCCCTTGCAATACCGTGGAA
AATACGCTGGCGAAGTCAGACTTGAAATGACCTACTATGATACGAGGCCC
GAAGATGAAGCGGTGATCGAAAGAAGAACTCCCGCAGCTGAGAAGTCTCA
CCACCCGAAGAAGGTTGCATCTTTCAGCTCAGGTCCAGTGCCGGCTAGCC
CTGGTACCCTCTCCGGTCCCAGGCAGTTGAAAGATGTCAAAAGACGCCCG
CTCCCTTCAGATCCTCGCCCGAGATCCTCGGCGCACTCAAGCACATCGAG
TAGCTCACCGGTTCGTGCCAATGATAGCACGAACTCGGCTGCATCCTTCA
ACCACCACAGCAACCACAACCACCATCAAGACCTCAGACAGCCAAGAGTG
GATAACAGCAGCTCTGGAATGAGCGATAGCACCACCTCGCTTCCTACATA
CAATCATAGAGAATATGCAAACCCGCAACGACTGGATAGCAACAGTTTAG
TCGTTGGCACTCCCACGGGATCCTACCACTCGAATCCCTGTCCCTACCCT
ATCACTTCTTCGGACAGCGGTTCAGGTGCCACTCATAGCACGACTTCGTT
GCCAAATTATCAGAATAATGAGTACTCGAGGCCTCATGTTGAGCATAGCA
ATCCGCCGATGAGCGACAGCTCCAGCCTGCTTCCACTCCTTCCAAACCCT
CACCGAATTGAGTACGCTAGCCAGGCGCCGCCTCACAGTAGCAGCAATTC
ACTCGTCGGCAATGCCACGAGCTCGTACAATACGAGTTCATGTCCTTCTT
ATCACGCTGAATACACAAAAATACCAGACAGCAGTTCGTTTGCCTCGACA
AGCTCAAGTGCGCAACAGCCGGCCTACGGGCATTATCGTGAATATGCACA
AATTGGATATACCCCCCCACTTCTCACCGACAGTCAGCCGTCTTCCCTGT
CATACGCGATGATGCAACCCCGTGTTGAGGACGAAGAAGAAGACGGACTA
CCACCCCCTCCACCTGCCCATCGCTCAGGACTGGTGCCAACCAGCCAGCC
AGTGCCAGTGGTACCCAACCCTGTCCCTCAGGCGTACACGCAACCAGCTC
CTCTGCCGCAGGTTACCATGCCTGAGCCGATGGAAAAGCCTGCTTCGGAC
AACAGTCTGTATACGACCCCGTCGTGGGATCCCAATTGGGACTATCCCAG
AGGCAGACGGGAGGAAAAGGTCGTGGCCACAACAAACGCGGTGCCAGCAA
GTCTAGTCCCTGGTTTTGATCCAGTACTTGCAGCAGCCGAATCGGATCGC
GCGGCGTATGAGCGAGAAATCAGACGAAGGAGCGGTAACTTCGATGAGAA
TCCGCTGCAAATGGTTCATAAGCCAGTTGATGACCACAGGAGGCATTCTC
ATGGTATCTACGACGAAAATCCTCTGAAGAAACCTCATGATACCCGGTCT
CTTGTGAGTCGAACTTCGACAGCCCCGAATAATCAACTTGTCCCCCGAAG
AAAATCAGTCAGCCCCCGACCCCCTTCGATGAGGGGCCGGGAGGTGTCTC
CTGTTCCATTCTCTCCCGATTCCTACCTGCCTGAAGCGGCGCGAGAGCCA
GCAGCGCGAGAATCAGGCCCCATTATAGGGGATGATGGTCGAGAAATCGA
TCCTTCCGACCACTTGCCTACCAATACCTGGGCCCCCGAGCCCGAACGAA
AAACCAAAAAGCCGGGAGTTGTTGTGCGTTTCCGCAGCCCCGTTCATCGA
GACAGTCCACCCAAGGACTACGGACATCGCAAGTCCATGTCCGAAGCATA
CTCTAATTCTCCCTCAAGGCTATATGCCGAGGCAAACAACCCACCTATAC
CATCTAAGGTCCCTGTCGGCCTCCCAACCAAAAGTTATGGAAACATTGAT
CAAAGCTACGATGCTCTGAGCCGAGAGCTCAATACGATAGATATTGGAGG
ATCTGGTCGAGGCATGAAAAGATATGCCCTTAGTTACGTGTCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004959-T1.utr5p1 | KJC3_004959-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004959-T1.utr3p1 | KJC3_004959-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263D2P |
| DBxref | InterPro:IPR037791 |
| DBxref | InterPro:IPR035892 |
| DBxref | InterPro:IPR000008 |
| DBxref | PFAM:PF00168 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1214627..1217523 + |
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