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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1222323..1223580+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004963-T1 ID=KJC3_004963-T1|Name=KJC3_004963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1258bp|location=Sequence derived from alignment at ch4:1222323..1223580+ (Aspergillus niger KJC3)
GCGCCTCATTGATCTCACAACCGAGACTTGACCCCGGACATATCGGGGTC
ATTCACGTCCACATGCACATGACCTCATTATCCGAACGGCTGTATTACCT
TTTGGAGGGTGATTCAGCCCTTCAGTTCTCTGCTGTGCGCGTATACCCCC
ACACTGCCCCGTCAATTGTGATAGACAGGTTTGCAATCCCCCAGACAGAT
TGAACTTGTACATTCCTCGTATACGCCTAACCTCGTGCATATACGAGTTG
GTCAATTGACCTAGTACTGAGAACTAGGCAGATACATGACTGAAACCGAG
CTAGAACCCAACATGAACCACCATAAGCGACAAACAACCTATATATAGGA
CCACAATCTACTTCCATCTCATCACCTACAACTCAGATCAGGAATTCCAA
ACAGACAACGAACAACACAATCTACTACCTTATCATAAATACTAAATAGT
ACCCAAAATGAACCTCCTCCTCATCACCCTCCCCCTACTTCTCCCTCTCA
CCCTCGCCCACCCAACCAACCCCCTAACCGCCGCCCTGGACATCGCCCAC
GACGCCACCCAATCCGCCGCGAATATCATCAACTCCACCCCCAACATCAT
CTCCTCTGCTGCGCCATACAACCTCGTCTCCGACCTCTGCACCCCAACAG
GCGCAAACTACTGCAACCTGGGAATCGCCACATATGCACCCAACGGCCGG
GTCCAGCTGCGCGAGACCTACGTCTACGATCGCTCCTGCAGGGGACTTGG
TGCTCTCCCGCAGAGCATGGATACGGGCCATTGGTCTTTGCATTCGCTGC
TGCCGTGGACGGTGGAAGTCGATGTTAAGGGCGGTGGGATTAAGCCGGAG
GGCGACGCTTGGTATGCCGGACGGAAAACAGATCTGGGGAAGAAGATGGC
ATGTAAGGATTGTGCTGGCGGGTTGAAGGATTGGCAGTGTTGTAGGGTGG
CGTTTGATTGTCGGTAGACGACTAGATTATATTAGATTGCTGGGAGTTGG
CAGGGATAGGGGAGGAGAGTGATGAGGGTGTCTTTCGGGTTATATTGTCT
TTGTCTTATTGGGGGGATTTGATGGTCTTGGGTTTATGGGACTGGGTATG
GATTTGATGGAGGAGAGTATGTTGGAGAAGGAAGACTGTGGTCGAGTATG
TAGAAAAGGGGGTAATGGGAGTGGAGCATAATTGCCGCCTTTATAGGTAG
TATGATTCTGGGACATATTCCTCCATCGGCTGTCCGATATATCGTTTTAG
TCTAGCAG back to topCoding sequence (CDS) from alignment at ch4:1222323..1223580+ >KJC3_004963-T1 ID=KJC3_004963-T1|Name=KJC3_004963-T1|organism=Aspergillus niger KJC3|type=CDS|length=510bp|location=Sequence derived from alignment at ch4:1222323..1223580+ (Aspergillus niger KJC3)
ATGAACCTCCTCCTCATCACCCTCCCCCTACTTCTCCCTCTCACCCTCGC
CCACCCAACCAACCCCCTAACCGCCGCCCTGGACATCGCCCACGACGCCA
CCCAATCCGCCGCGAATATCATCAACTCCACCCCCAACATCATCTCCTCT
GCTGCGCCATACAACCTCGTCTCCGACCTCTGCACCCCAACAGGCGCAAA
CTACTGCAACCTGGGAATCGCCACATATGCACCCAACGGCCGGGTCCAGC
TGCGCGAGACCTACGTCTACGATCGCTCCTGCAGGGGACTTGGTGCTCTC
CCGCAGAGCATGGATACGGGCCATTGGTCTTTGCATTCGCTGCTGCCGTG
GACGGTGGAAGTCGATGTTAAGGGCGGTGGGATTAAGCCGGAGGGCGACG
CTTGGTATGCCGGACGGAAAACAGATCTGGGGAAGAAGATGGCATGTAAG
GATTGTGCTGGCGGGTTGAAGGATTGGCAGTGTTGTAGGGTGGCGTTTGA
TTGTCGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004963-T1.utr5p1 | KJC3_004963-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004963-T1.utr3p1 | KJC3_004963-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1222323..1223580 + |
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