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KJC3_004966-T1, KJC3_004966-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004966-T1
Unique NameKJC3_004966-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1230250..1231189-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004966-T1 ID=KJC3_004966-T1|Name=KJC3_004966-T1|organism=Aspergillus niger KJC3|type=mRNA|length=940bp|location=Sequence derived from alignment at ch4:1230250..1231189- (Aspergillus niger KJC3)
GCTCATTTCACGCCTCGTATAAGTACACCGTGCGATTCCCCTCTCCATTG
GTCCCCCCAAACTGCAACACCATCACCATTCACCATCATCACCACCACCA
TGGACATGCACATGTCCAGCAGCTCCAACTCGAGCGCCTGCTCGGTAGCC
GTACGTCGCTTCTCTCCCTCTGCTTGACACCTGATGACTAATCAGCATGG
CAGATGTTATGGAACTGGACTACAATCGATGCCTGTATGAATCCATTTTA
GTACTCTGTATAGCTCTTGTCCATCTTAACCCTAACAATTGCAGGTTTCC
TCTCTTCGACCTGGCACATCAACACGGCGGGCCAATTTGCCGTCTCATGC
ATCGCAGTCGCCTTCCTCGTCGTTGTGCTCGACTTCCTCCGCCTCCTAAG
CAAGCAATACGAGGAGCATCTCCAGCGACAATTCCAGCGCTACGTTGCAG
CGCAAACAACATCGGACCGCATGCAGTTTTTCTGCGGCGACAGCCTGGAG
CACGGGCCAACGGTGCTTACCTTCCGAGCCAGTCCCCTGCAGCAGCTGGC
GCGGGCGCTACTGCACACGCTGCAGTTCGGGCTCGCCTACATTATCATGC
TGATCGCCATGTACTACAATGGGTACATGATCATCTCCATCTTCCTAGGC
GCGTTTCTGGGGAAGGTGTTCTGCGACCGGGGCGAGTACCGTGTCGTGGT
GGCGCGGCCGGGGGCCAGGACAACGGATGCGACGAAGGCAATGGAGATGG
AGCCGGGGAAACAGACAGAAGAGTGGACGACGGGTTGTTGTGGGTAGTTA
GGGTATAGTTTATTTCATAGTATAACGAAAGCCCATCTTGTCTTGAGATT
CAGATTGTCTCAGATTAAATTAATTGTAAAATTGGAGGGGGCCGTTGAGT
GCTTAGTCATGATTGGTGTTGCTGCCTCATTATCATAGCC
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Coding sequence (CDS) from alignment at ch4:1230250..1231189-

>KJC3_004966-T1 ID=KJC3_004966-T1|Name=KJC3_004966-T1|organism=Aspergillus niger KJC3|type=CDS|length=1755bp|location=Sequence derived from alignment at ch4:1230250..1231189- (Aspergillus niger KJC3)
GTTTCCTCTCTTCGACCTGGCACATCAACACGGCGGGCCAATTTGCCGTC
TCATGCATCGCAGTCGCCTTCCTCGTCGTTGTGCTCGACTTCCTCCGCCT
CCTAAGCAAGCAATACGAGGAGCATCTCCAGCGACAATTCCAGCGCTACG
TTGCAGCGCAAACAACATCGGACCGCATGCAGTTTTTCTGCGGCGACAGC
CTGGAGCACGGGCCAACGGTGCTTACCTTCCGAGCCAGTCCCCTGCAGCA
GCTGGCGCGGGCGCTACTGCACACGCTGCAGTTCGGGCTCGCCTACATTA
TCATGCTGATCGCCATGTACTACAATGGGTACATGATCATCTCCATCTTC
CTAGGCGCGTTTCTGGGGAAGGTGTTCTGCGACCGGGGCGAGTACCGTGT
CGTGGTGGCGCGGCCGGGGGCCAGGACAACGGATGCGACGAAGGCAATGG
AGATGGAGCCGGGGAAACAGACAGAAGAGTGGACGACGGGTTGTTGTGGG
TAGATGTTATGGAACTGGACTACAATCGATGCCTATGGACATGCACATGT
CCAGCAGCTCCAACTCGAGCGCCTGCTCGGTAGCCGTTTCCTCTCTTCGA
CCTGGCACATCAACACGGCGGGCCAATTTGCCGTCTCATGCATCGCAGTC
GCCTTCCTCGTCGTTGTGCTCGACTTCCTCCGCCTCCTAAGCAAGCAATA
CGAGGAGCATCTCCAGCGACAATTCCAGCGCTACGTTGCAGCGCAAACAA
CATCGGACCGCATGCAGTTTTTCTGCGGCGACAGCCTGGAGCACGGGCCA
ACGGTGCTTACCTTCCGAGCCAGTCCCCTGCAGCAGCTGGCGCGGGCGCT
ACTGCACACGCTGCAGTTCGGGCTCGCCTACATTATCATGCTGATCGCCA
TGTACTACAATGGGTACATGATCATCTCCATCTTCCTAGGCGCGTTTCTG
GGGAAGGTGTTCTGCGACCGGGGCGAGTACCGTGTCGTGGTGGCGCGGCC
GGGGGCCAGGACAACGGATGCGACGAAGGCAATGGAGATGGAGCCGGGGA
AACAGACAGAAGAGTGGACGACGGGTTGTTGTGGGTAGATGTTATGGAAC
TGGACTACAATCGATGCCTATGGACATGCACATGTCCAGCAGCTCCAACT
CGAGCGCCTGCTCGGTAGCCGTTTCCTCTCTTCGACCTGGCACATCAACA
CGGCGGGCCAATTTGCCGTCTCATGCATCGCAGTCGCCTTCCTCGTCGTT
GTGCTCGACTTCCTCCGCCTCCTAAGCAAGCAATACGAGGAGCATCTCCA
GCGACAATTCCAGCGCTACGTTGCAGCGCAAACAACATCGGACCGCATGC
AGTTTTTCTGCGGCGACAGCCTGGAGCACGGGCCAACGGTGCTTACCTTC
CGAGCCAGTCCCCTGCAGCAGCTGGCGCGGGCGCTACTGCACACGCTGCA
GTTCGGGCTCGCCTACATTATCATGCTGATCGCCATGTACTACAATGGGT
ACATGATCATCTCCATCTTCCTAGGCGCGTTTCTGGGGAAGGTGTTCTGC
GACCGGGGCGAGTACCGTGTCGTGGTGGCGCGGCCGGGGGCCAGGACAAC
GGATGCGACGAAGGCAATGGAGATGGAGCCGGGGAAACAGACAGAAGAGT
GGACGACGGGTTGTTGTGGGTAGATGTTATGGAACTGGACTACAATCGAT
GCCTATGGACATGCACATGTCCAGCAGCTCCAACTCGAGCGCCTGCTCGG
TAGCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0035434copper ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004966KJC3_004966Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004966-T1KJC3_004966-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004966-T1.cdsKJC3_004966-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004966-T1.utr3p1KJC3_004966-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004966-T1.exon3KJC3_004966-T1.exon3Aspergillus niger KJC3exon
KJC3_004966-T1.exon2KJC3_004966-T1.exon2Aspergillus niger KJC3exon
KJC3_004966-T1.exon1KJC3_004966-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004966-T1.utr5p1KJC3_004966-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007274
DBxrefPFAM:PF04145
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1230250..1231189 -
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