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KJC3_004977-T2, KJC3_004977-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004977-T2
Unique NameKJC3_004977-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1257203..1259051-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004977-T2 ID=KJC3_004977-T2|Name=KJC3_004977-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1849bp|location=Sequence derived from alignment at ch4:1257203..1259051- (Aspergillus niger KJC3)
GGCTTTTCAATTTGTTTCTCATAGACACATCTCCTCTCTGATTCTCCTTC
GTTCTTATACTATACTATCATCATGGCGCAAACTCCGCAAGACCTTAAGA
TTGCCATTTTGGGTGCTGGTACGTACATCCTTTTTTTTTCTTCCCCCTCC
CTATAATAGGGTTTAGTATAGGAGTATGGCAGAAAACTAACGGGTGCGTG
GATGTATAGGCATGGGTGGCCTGACCTGCGCTTTGGCTCTGGCAAAGGAA
GGTTTCAAGCACATCGACGTTTATGAGAATGCACACGATCTGGGCTTCGT
TGGAGCTGGTATCCAACTGGCCCCGAACATGGCCCGCGTGCTGGATCGCC
TGGGCGTCTGGAAGCCCATTGAGGCCGAAGCTGTTAACATCACTTCCACT
AGCGTTAGAGGTATGTGCTATATTCCCTGCTGGAGGATTAAAAGATCTAC
ATGTCTATCTATATGAAACACCGAGATCAAACGCTAATAACTCCGAACAG
TCGGTGCCTCGGACTCAGAATTGGCCCACGTTCCATTGGAATATATCCAC
GATACCTACGGATATCCTCACATGGTTGGCCACCGGTCTTCCCTCGCCGG
CCACCTGTACCAAGGTTGCCTGCAGCACCCTGACCAGATCCACTTCCACT
TCGCCACTACCGCCAGCGACACCACCTTCGGCCCCAAGTCCTCCTTCACT
GCCACCCCCCGCGACGCCCCCGAGAAGGCCTACCGCGTCGAGGCCGATGT
CCTCCTCGCCTGTGATGGCATCAAGTCCCAGGCCCGTGTGGCCATGCTCG
ATCTCCTCAACATCAAGGCCAGCGTCAAGGACACCCACCAGGCCGCCTAC
CGTATCATGATCCACAAGGACCAGATCAAGGACGACCCGGAGCTCCTGGA
GCTCATGAACGGCAACCGCGTGACTCGCTGGATCGGCGAGAAGCGCCATA
TCATCGCCTACCCCGTCTCCAACAACACCATCTACAACCTCTCCACCACC
CAACCCGACACTCACTTCGCCGCCGCCACCAATGCCACCTACACCACCCG
CGGTGACAAGTCCGTCATGCTGGGCGTCTTTGGCGACTTCTGCCCCATGG
TCCAGCGTATGCTGAACTACGTCCCCGAGGGTGAAGTCTGCGAGTGGAAG
CTGCGTGTCCATGAGCCCCTCCCCACCTGGGTGCACGAGACCGTCGCCCT
CGTCGGTGATGCCTGCCACCCTACCCTGCCCCATCTCGCCCAGGGTGCCG
CCCAGGCCATCGAAGACGGTGGTGTCATTGGTGCCGTGCTCTCCAAGCTC
CCCGATACCACCCCGGCTTCCATCCACAAGGCCCTCAAGGTTTACGAGAA
GGTGCGCAAGGACCGCGCCTACGCTATCGTCGAACTGGCCGCCGCTTCCG
GTCGTGCTCTGCACCTGGGTGAAGGTGCCGCCAAGGAGGAGCGCGATCGC
CAATTCGCTGCTCTCCGCCAGGGCAAGGGCCCTGTGCCCGACAAGTGGGC
GGATGCCGATGTCCAGAAGGAGCTGTATGGCGTTGATGCGACTAAGATCG
CGCTGGAGCAATTCGACGAGCTCTTTGCTTCTGTGTAAGCTTTGGCCTTT
ATACCTTTTTCGTTTAATTTTTCCTTTTCCCATTCATTGCCTGCACGATT
GAACCCGATGTATATTGTATATAGAGCTGATTGGTTGTATTGATGATTGA
AGGTCGGGTCGTGAGGCAAAGCTGGCTTGATTGATTGATTGATTGATTGA
TCGGCCGGAATTAGTGTTCTTTTATCTAGCATTGCAGCCCCTTGCATATA
CAATGATGATGTTATGATTGTTATACAGAGTTATTTTCTTTGTTCCTAG
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Coding sequence (CDS) from alignment at ch4:1257203..1259051-

>KJC3_004977-T2 ID=KJC3_004977-T2|Name=KJC3_004977-T2|organism=Aspergillus niger KJC3|type=CDS|length=5436bp|location=Sequence derived from alignment at ch4:1257203..1259051- (Aspergillus niger KJC3)
GTCGGGTCGTGAGGCAAAGCTGGCTTGATCGGTGCCTCGGACTCAGAATT
GGCCCACGTTCCATTGGAATATATCCACGATACCTACGGATATCCTCACA
TGGTTGGCCACCGGTCTTCCCTCGCCGGCCACCTGTACCAAGGTTGCCTG
CAGCACCCTGACCAGATCCACTTCCACTTCGCCACTACCGCCAGCGACAC
CACCTTCGGCCCCAAGTCCTCCTTCACTGCCACCCCCCGCGACGCCCCCG
AGAAGGCCTACCGCGTCGAGGCCGATGTCCTCCTCGCCTGTGATGGCATC
AAGTCCCAGGCCCGTGTGGCCATGCTCGATCTCCTCAACATCAAGGCCAG
CGTCAAGGACACCCACCAGGCCGCCTACCGTATCATGATCCACAAGGACC
AGATCAAGGACGACCCGGAGCTCCTGGAGCTCATGAACGGCAACCGCGTG
ACTCGCTGGATCGGCGAGAAGCGCCATATCATCGCCTACCCCGTCTCCAA
CAACACCATCTACAACCTCTCCACCACCCAACCCGACACTCACTTCGCCG
CCGCCACCAATGCCACCTACACCACCCGCGGTGACAAGTCCGTCATGCTG
GGCGTCTTTGGCGACTTCTGCCCCATGGTCCAGCGTATGCTGAACTACGT
CCCCGAGGGTGAAGTCTGCGAGTGGAAGCTGCGTGTCCATGAGCCCCTCC
CCACCTGGGTGCACGAGACCGTCGCCCTCGTCGGTGATGCCTGCCACCCT
ACCCTGCCCCATCTCGCCCAGGGTGCCGCCCAGGCCATCGAAGACGGTGG
TGTCATTGGTGCCGTGCTCTCCAAGCTCCCCGATACCACCCCGGCTTCCA
TCCACAAGGCCCTCAAGGTTTACGAGAAGGTGCGCAAGGACCGCGCCTAC
GCTATCGTCGAACTGGCCGCCGCTTCCGGTCGTGCTCTGCACCTGGGTGA
AGGTGCCGCCAAGGAGGAGCGCGATCGCCAATTCGCTGCTCTCCGCCAGG
GCAAGGGCCCTGTGCCCGACAAGTGGGCGGATGCCGATGTCCAGAAGGAG
CTGTATGGCGTTGATGCGACTAAGATCGCGCTGGAGCAATTCGACGAGCT
CTTTGCTTCTGTGCATGGGTGGCCTGACCTGCGCTTTGGCTCTGGCAAAG
GAAGGTTTCAAGCACATCGACGTTTATGAGAATGCACACGATCTGGGCTT
CGTTGGAGCTGGTATCCAACTGGCCCCGAACATGGCCCGCGTGCTGGATC
GCCTGGGCGTCTGGAAGCCCATTGAGGCCGAAGCTGTTAACATCACTTCC
ACTAGCGTTAGAGATGGCGCAAACTCCGCAAGACCTTAAGATTGCCATTT
TGGGTGCTGGTCGGGTCGTGAGGCAAAGCTGGCTTGATCGGTGCCTCGGA
CTCAGAATTGGCCCACGTTCCATTGGAATATATCCACGATACCTACGGAT
ATCCTCACATGGTTGGCCACCGGTCTTCCCTCGCCGGCCACCTGTACCAA
GGTTGCCTGCAGCACCCTGACCAGATCCACTTCCACTTCGCCACTACCGC
CAGCGACACCACCTTCGGCCCCAAGTCCTCCTTCACTGCCACCCCCCGCG
ACGCCCCCGAGAAGGCCTACCGCGTCGAGGCCGATGTCCTCCTCGCCTGT
GATGGCATCAAGTCCCAGGCCCGTGTGGCCATGCTCGATCTCCTCAACAT
CAAGGCCAGCGTCAAGGACACCCACCAGGCCGCCTACCGTATCATGATCC
ACAAGGACCAGATCAAGGACGACCCGGAGCTCCTGGAGCTCATGAACGGC
AACCGCGTGACTCGCTGGATCGGCGAGAAGCGCCATATCATCGCCTACCC
CGTCTCCAACAACACCATCTACAACCTCTCCACCACCCAACCCGACACTC
ACTTCGCCGCCGCCACCAATGCCACCTACACCACCCGCGGTGACAAGTCC
GTCATGCTGGGCGTCTTTGGCGACTTCTGCCCCATGGTCCAGCGTATGCT
GAACTACGTCCCCGAGGGTGAAGTCTGCGAGTGGAAGCTGCGTGTCCATG
AGCCCCTCCCCACCTGGGTGCACGAGACCGTCGCCCTCGTCGGTGATGCC
TGCCACCCTACCCTGCCCCATCTCGCCCAGGGTGCCGCCCAGGCCATCGA
AGACGGTGGTGTCATTGGTGCCGTGCTCTCCAAGCTCCCCGATACCACCC
CGGCTTCCATCCACAAGGCCCTCAAGGTTTACGAGAAGGTGCGCAAGGAC
CGCGCCTACGCTATCGTCGAACTGGCCGCCGCTTCCGGTCGTGCTCTGCA
CCTGGGTGAAGGTGCCGCCAAGGAGGAGCGCGATCGCCAATTCGCTGCTC
TCCGCCAGGGCAAGGGCCCTGTGCCCGACAAGTGGGCGGATGCCGATGTC
CAGAAGGAGCTGTATGGCGTTGATGCGACTAAGATCGCGCTGGAGCAATT
CGACGAGCTCTTTGCTTCTGTGCATGGGTGGCCTGACCTGCGCTTTGGCT
CTGGCAAAGGAAGGTTTCAAGCACATCGACGTTTATGAGAATGCACACGA
TCTGGGCTTCGTTGGAGCTGGTATCCAACTGGCCCCGAACATGGCCCGCG
TGCTGGATCGCCTGGGCGTCTGGAAGCCCATTGAGGCCGAAGCTGTTAAC
ATCACTTCCACTAGCGTTAGAGATGGCGCAAACTCCGCAAGACCTTAAGA
TTGCCATTTTGGGTGCTGGTCGGGTCGTGAGGCAAAGCTGGCTTGATCGG
TGCCTCGGACTCAGAATTGGCCCACGTTCCATTGGAATATATCCACGATA
CCTACGGATATCCTCACATGGTTGGCCACCGGTCTTCCCTCGCCGGCCAC
CTGTACCAAGGTTGCCTGCAGCACCCTGACCAGATCCACTTCCACTTCGC
CACTACCGCCAGCGACACCACCTTCGGCCCCAAGTCCTCCTTCACTGCCA
CCCCCCGCGACGCCCCCGAGAAGGCCTACCGCGTCGAGGCCGATGTCCTC
CTCGCCTGTGATGGCATCAAGTCCCAGGCCCGTGTGGCCATGCTCGATCT
CCTCAACATCAAGGCCAGCGTCAAGGACACCCACCAGGCCGCCTACCGTA
TCATGATCCACAAGGACCAGATCAAGGACGACCCGGAGCTCCTGGAGCTC
ATGAACGGCAACCGCGTGACTCGCTGGATCGGCGAGAAGCGCCATATCAT
CGCCTACCCCGTCTCCAACAACACCATCTACAACCTCTCCACCACCCAAC
CCGACACTCACTTCGCCGCCGCCACCAATGCCACCTACACCACCCGCGGT
GACAAGTCCGTCATGCTGGGCGTCTTTGGCGACTTCTGCCCCATGGTCCA
GCGTATGCTGAACTACGTCCCCGAGGGTGAAGTCTGCGAGTGGAAGCTGC
GTGTCCATGAGCCCCTCCCCACCTGGGTGCACGAGACCGTCGCCCTCGTC
GGTGATGCCTGCCACCCTACCCTGCCCCATCTCGCCCAGGGTGCCGCCCA
GGCCATCGAAGACGGTGGTGTCATTGGTGCCGTGCTCTCCAAGCTCCCCG
ATACCACCCCGGCTTCCATCCACAAGGCCCTCAAGGTTTACGAGAAGGTG
CGCAAGGACCGCGCCTACGCTATCGTCGAACTGGCCGCCGCTTCCGGTCG
TGCTCTGCACCTGGGTGAAGGTGCCGCCAAGGAGGAGCGCGATCGCCAAT
TCGCTGCTCTCCGCCAGGGCAAGGGCCCTGTGCCCGACAAGTGGGCGGAT
GCCGATGTCCAGAAGGAGCTGTATGGCGTTGATGCGACTAAGATCGCGCT
GGAGCAATTCGACGAGCTCTTTGCTTCTGTGCATGGGTGGCCTGACCTGC
GCTTTGGCTCTGGCAAAGGAAGGTTTCAAGCACATCGACGTTTATGAGAA
TGCACACGATCTGGGCTTCGTTGGAGCTGGTATCCAACTGGCCCCGAACA
TGGCCCGCGTGCTGGATCGCCTGGGCGTCTGGAAGCCCATTGAGGCCGAA
GCTGTTAACATCACTTCCACTAGCGTTAGAGATGGCGCAAACTCCGCAAG
ACCTTAAGATTGCCATTTTGGGTGCTGGTCGGGTCGTGAGGCAAAGCTGG
CTTGATCGGTGCCTCGGACTCAGAATTGGCCCACGTTCCATTGGAATATA
TCCACGATACCTACGGATATCCTCACATGGTTGGCCACCGGTCTTCCCTC
GCCGGCCACCTGTACCAAGGTTGCCTGCAGCACCCTGACCAGATCCACTT
CCACTTCGCCACTACCGCCAGCGACACCACCTTCGGCCCCAAGTCCTCCT
TCACTGCCACCCCCCGCGACGCCCCCGAGAAGGCCTACCGCGTCGAGGCC
GATGTCCTCCTCGCCTGTGATGGCATCAAGTCCCAGGCCCGTGTGGCCAT
GCTCGATCTCCTCAACATCAAGGCCAGCGTCAAGGACACCCACCAGGCCG
CCTACCGTATCATGATCCACAAGGACCAGATCAAGGACGACCCGGAGCTC
CTGGAGCTCATGAACGGCAACCGCGTGACTCGCTGGATCGGCGAGAAGCG
CCATATCATCGCCTACCCCGTCTCCAACAACACCATCTACAACCTCTCCA
CCACCCAACCCGACACTCACTTCGCCGCCGCCACCAATGCCACCTACACC
ACCCGCGGTGACAAGTCCGTCATGCTGGGCGTCTTTGGCGACTTCTGCCC
CATGGTCCAGCGTATGCTGAACTACGTCCCCGAGGGTGAAGTCTGCGAGT
GGAAGCTGCGTGTCCATGAGCCCCTCCCCACCTGGGTGCACGAGACCGTC
GCCCTCGTCGGTGATGCCTGCCACCCTACCCTGCCCCATCTCGCCCAGGG
TGCCGCCCAGGCCATCGAAGACGGTGGTGTCATTGGTGCCGTGCTCTCCA
AGCTCCCCGATACCACCCCGGCTTCCATCCACAAGGCCCTCAAGGTTTAC
GAGAAGGTGCGCAAGGACCGCGCCTACGCTATCGTCGAACTGGCCGCCGC
TTCCGGTCGTGCTCTGCACCTGGGTGAAGGTGCCGCCAAGGAGGAGCGCG
ATCGCCAATTCGCTGCTCTCCGCCAGGGCAAGGGCCCTGTGCCCGACAAG
TGGGCGGATGCCGATGTCCAGAAGGAGCTGTATGGCGTTGATGCGACTAA
GATCGCGCTGGAGCAATTCGACGAGCTCTTTGCTTCTGTGCATGGGTGGC
CTGACCTGCGCTTTGGCTCTGGCAAAGGAAGGTTTCAAGCACATCGACGT
TTATGAGAATGCACACGATCTGGGCTTCGTTGGAGCTGGTATCCAACTGG
CCCCGAACATGGCCCGCGTGCTGGATCGCCTGGGCGTCTGGAAGCCCATT
GAGGCCGAAGCTGTTAACATCACTTCCACTAGCGTTAGAGATGGCGCAAA
CTCCGCAAGACCTTAAGATTGCCATTTTGGGTGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004977KJC3_004977Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004977-T2KJC3_004977-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004977-T2.cdsKJC3_004977-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004977-T2.utr3p1KJC3_004977-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004977-T2.exon4KJC3_004977-T2.exon4Aspergillus niger KJC3exon
KJC3_004977-T2.exon3KJC3_004977-T2.exon3Aspergillus niger KJC3exon
KJC3_004977-T2.exon2KJC3_004977-T2.exon2Aspergillus niger KJC3exon
KJC3_004977-T2.exon1KJC3_004977-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004977-T2.utr5p1KJC3_004977-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR002938
DBxrefPFAM:PF13450
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1257203..1259051 -
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