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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1259625..1261715- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004978-T1 ID=KJC3_004978-T1|Name=KJC3_004978-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2091bp|location=Sequence derived from alignment at ch4:1259625..1261715- (Aspergillus niger KJC3)
GGTCAAGCAAGTCTCTCTTTCATCTCTCCGCCTTCTTCCTTCTTTTGCTT
CCCTCGCTTGACGACCACCGTTCCTTTTGTCGTTTTGTCACATTCCTTCG
CTTGTGTTTCAATATGAAGGCATCAATCCTAACGGCCCTCACTTTGGCCG
CTTGCTCCTTCGCGAGCCCCGTCGGCCAGCTTCATGCTCGCGACGGCGAA
TGCACCTGCCAGCCCAATGGTGGTTCGAGCTCTGGCTCTGGCTCTGGCTC
TGGCTCTGGCCCTTATCCCGGCTCTGGCTCTGGCTCTGCTCCTGGCTCTG
GGTCTTATCCCGGCTCTGGCTCTGGCTCTGCTCCTGGATCTGGGTCTTAC
CCCGGCTCCGGCTCCGGCTCTGCTCCAGGATCGGGTTCTTACCCCGGCTC
TGGTTCCGGCTCTGCCCCCGGTTCTGGCTCCTATCCTGGCTCGGGATCGG
GATCTGGCTCCTACCCTGGCTCTGGCTCTGGCTCCGGCGCTGCTCCCAGC
TCTGGCTCTACTGCTCCTGGATCTGGGTCTTACCCCGGCTCAGGAGCTGC
TCCCAGCTCTGGTGCTGGCTCTGCTCCTGGCACTGGCTCCGGTTCCGCAC
CTGGCACCGGCTCTGGTTCTTATCCCGGCTCAGGTGCAGGCTCTTACCCT
GGCTCCGGCTCTGGTTCGGGTCCTCAGCCCTCCCAGGTGTCGACCTACCC
TGCTTCTCAGGTCCCAACGCTGCCTGGCTACCAGCCCCAGCCTACGATTA
CATTGACGACGACTGTTCCCGTCACTGCCTCCCCCGGCTCCCCTGAGTGC
ACTACAACTGCTCCCGCTGCTCCTGCTGGTCAGCCTTCTGGCCAATCCTC
TGGCCAACCCGCTGGCCCCGGTGCTCCTACCGGTCCAGCCGGCCAATCCC
CTAGCCCTGCTGCTCCCGCTGGTCCTACCGGTCCTGCTGGACAGCCATCT
GGTCCTTCTACACCTGCTTCCCAGCCTTCCGGCCCCGCTGGTCAGCCCTC
TGGCCCTGCCGGCCCATCTGGACCGGCCAACTCTGGCTACCCTGGCAACC
CTAGCCCCTCGTCCCCGTGGGGTGCACCCACCTCTTCGGTTCCCGCTGGA
TCTCCCTCTCAGACTCCCTCATGTGAAAACGGCCACTGCCACGGCACCGG
CCATCTCCTTCAGGATCTGGGCGTTCAGGCGGATCACCTTCTGACCGTTG
TTGGTAATGGCACCGAACAGCTGCTCGTCCAGCTCAGCAAGCCCGTTGCG
GACGTTCTTTCCAGCCTGGGCCTGACCGGCCTTGCTAAGCCCGTGGGCCA
CATCATCAAGGATGCCGGCAGCATTGGCGAGCTGGTCACGGATCTGGGCG
CCCCCGTCGAGCAGCTTCTGGTCGTCACCGGCAAGGACACTGGCTATCTC
TTGATTCAACTGGACCAGGATGTCAAGGGCCTCCTCGACGGCATTGGCCT
CGACGCCTTGGGTGAGCCCGTTGGTGACCTGCTGGGTGCCATTGGCAGTA
GCTTGAAGCGTCGCCAGAACTGGGACTACAACCCTGACGCCAAAAATCCC
AACGGACTCCTCGAGAAGCTGGGACCAGTGATTGACTGCATCTTGGTGAT
TACCGGCGAGGACGCCAAGGACCTTATCGTTAAGCTGAGCAAGCCCGTGG
CTGAGCTGTTCGAGAAACTGGGACTGACTGGCCTGGGCAAGAGCGTTGGC
AAGGTCATCAAGACGGTCGGCGATGCGGGCGACTTGGTTGCGGATCTGGG
TCCGGTCAGCGAGAGTTTGCTGACGGTAGTTGGCGATGGTGGCAGCAAGC
TGGTGGTCCAGTTGGCTCCTGATGTTGCGGACTTGGTGAAGGGCCTGGGA
CTCCCCAAACTTGGTGATGCCGTGGGTGAAGTTCTCGGAGCTGTGGGTGA
GAACTTGTAAGAAGTCTCGACTATTTCCCCTCTTTTTCTTTTCCTCTGTC
CTATGAATGGGTGATGGAATTGCATTGCATTACATTTTCTGGGATGCGAT
GGTGTTGAGGCTACTTACTAGTACTATATACTATACAAGATGTAATTAGT
GTAATTGTTAATGATACCTAATCAAGATATTTTCAGTTGAC back to topCoding sequence (CDS) from alignment at ch4:1259625..1261715- >KJC3_004978-T1 ID=KJC3_004978-T1|Name=KJC3_004978-T1|organism=Aspergillus niger KJC3|type=CDS|length=1797bp|location=Sequence derived from alignment at ch4:1259625..1261715- (Aspergillus niger KJC3)
ATGAAGGCATCAATCCTAACGGCCCTCACTTTGGCCGCTTGCTCCTTCGC
GAGCCCCGTCGGCCAGCTTCATGCTCGCGACGGCGAATGCACCTGCCAGC
CCAATGGTGGTTCGAGCTCTGGCTCTGGCTCTGGCTCTGGCTCTGGCCCT
TATCCCGGCTCTGGCTCTGGCTCTGCTCCTGGCTCTGGGTCTTATCCCGG
CTCTGGCTCTGGCTCTGCTCCTGGATCTGGGTCTTACCCCGGCTCCGGCT
CCGGCTCTGCTCCAGGATCGGGTTCTTACCCCGGCTCTGGTTCCGGCTCT
GCCCCCGGTTCTGGCTCCTATCCTGGCTCGGGATCGGGATCTGGCTCCTA
CCCTGGCTCTGGCTCTGGCTCCGGCGCTGCTCCCAGCTCTGGCTCTACTG
CTCCTGGATCTGGGTCTTACCCCGGCTCAGGAGCTGCTCCCAGCTCTGGT
GCTGGCTCTGCTCCTGGCACTGGCTCCGGTTCCGCACCTGGCACCGGCTC
TGGTTCTTATCCCGGCTCAGGTGCAGGCTCTTACCCTGGCTCCGGCTCTG
GTTCGGGTCCTCAGCCCTCCCAGGTGTCGACCTACCCTGCTTCTCAGGTC
CCAACGCTGCCTGGCTACCAGCCCCAGCCTACGATTACATTGACGACGAC
TGTTCCCGTCACTGCCTCCCCCGGCTCCCCTGAGTGCACTACAACTGCTC
CCGCTGCTCCTGCTGGTCAGCCTTCTGGCCAATCCTCTGGCCAACCCGCT
GGCCCCGGTGCTCCTACCGGTCCAGCCGGCCAATCCCCTAGCCCTGCTGC
TCCCGCTGGTCCTACCGGTCCTGCTGGACAGCCATCTGGTCCTTCTACAC
CTGCTTCCCAGCCTTCCGGCCCCGCTGGTCAGCCCTCTGGCCCTGCCGGC
CCATCTGGACCGGCCAACTCTGGCTACCCTGGCAACCCTAGCCCCTCGTC
CCCGTGGGGTGCACCCACCTCTTCGGTTCCCGCTGGATCTCCCTCTCAGA
CTCCCTCATGTGAAAACGGCCACTGCCACGGCACCGGCCATCTCCTTCAG
GATCTGGGCGTTCAGGCGGATCACCTTCTGACCGTTGTTGGTAATGGCAC
CGAACAGCTGCTCGTCCAGCTCAGCAAGCCCGTTGCGGACGTTCTTTCCA
GCCTGGGCCTGACCGGCCTTGCTAAGCCCGTGGGCCACATCATCAAGGAT
GCCGGCAGCATTGGCGAGCTGGTCACGGATCTGGGCGCCCCCGTCGAGCA
GCTTCTGGTCGTCACCGGCAAGGACACTGGCTATCTCTTGATTCAACTGG
ACCAGGATGTCAAGGGCCTCCTCGACGGCATTGGCCTCGACGCCTTGGGT
GAGCCCGTTGGTGACCTGCTGGGTGCCATTGGCAGTAGCTTGAAGCGTCG
CCAGAACTGGGACTACAACCCTGACGCCAAAAATCCCAACGGACTCCTCG
AGAAGCTGGGACCAGTGATTGACTGCATCTTGGTGATTACCGGCGAGGAC
GCCAAGGACCTTATCGTTAAGCTGAGCAAGCCCGTGGCTGAGCTGTTCGA
GAAACTGGGACTGACTGGCCTGGGCAAGAGCGTTGGCAAGGTCATCAAGA
CGGTCGGCGATGCGGGCGACTTGGTTGCGGATCTGGGTCCGGTCAGCGAG
AGTTTGCTGACGGTAGTTGGCGATGGTGGCAGCAAGCTGGTGGTCCAGTT
GGCTCCTGATGTTGCGGACTTGGTGAAGGGCCTGGGACTCCCCAAACTTG
GTGATGCCGTGGGTGAAGTTCTCGGAGCTGTGGGTGAGAACTTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004978-T1.utr3p1 | KJC3_004978-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004978-T1.utr5p1 | KJC3_004978-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-25) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1259625..1261715 - |
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