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KJC3_004989-T1, KJC3_004989-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004989-T1
Unique NameKJC3_004989-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1286528..1286983+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004989-T1 ID=KJC3_004989-T1|Name=KJC3_004989-T1|organism=Aspergillus niger KJC3|type=mRNA|length=456bp|location=Sequence derived from alignment at ch4:1286528..1286983+ (Aspergillus niger KJC3)
ATGCCCGCACACCTGGGCCACGAGGAGGTACTTCACCTCCACAACCACAA
CAACACCCCCAAAACCAATACTGACCAAACGAACTAGTTCTTCACCTCCC
TCACCACCCTCCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTAC
CTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATC
CATTCTCATCCGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGA
CGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTG
AAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCG
GTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATC
GGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAG
GGGTGA
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Coding sequence (CDS) from alignment at ch4:1286528..1286983+

>KJC3_004989-T1 ID=KJC3_004989-T1|Name=KJC3_004989-T1|organism=Aspergillus niger KJC3|type=CDS|length=792bp|location=Sequence derived from alignment at ch4:1286528..1286983+ (Aspergillus niger KJC3)
ATGCCCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCT
CCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGA
AGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATC
CGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGC
CAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGA
CGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAG
GTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGG
CAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGAATGC
CCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCTCCTA
AGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGAAGCC
TCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATCCGCG
CGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGCCAAG
AAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGACGGT
CGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAGGTGT
GTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGGCAAG
GCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005786signal recognition particle, endoplasmic reticulum targeting
GO:0048500signal recognition particle
Vocabulary: Molecular Function
TermDefinition
GO:0030942endoplasmic reticulum signal peptide binding
GO:00083127S RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004989KJC3_004989Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004989-T1.exon1KJC3_004989-T1.exon1Aspergillus niger KJC3exon
KJC3_004989-T1.exon2KJC3_004989-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004989-T1.cdsKJC3_004989-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004989-T1KJC3_004989-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003210
DBxrefInterPro:IPR009018
DBxrefPFAM:PF02290
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1286528..1286983 +
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