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KJC3_004995-T1, KJC3_004995-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004995-T1
Unique NameKJC3_004995-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1297292..1298257+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004995-T1 ID=KJC3_004995-T1|Name=KJC3_004995-T1|organism=Aspergillus niger KJC3|type=mRNA|length=966bp|location=Sequence derived from alignment at ch4:1297292..1298257+ (Aspergillus niger KJC3)
TGGAGATATTTACTCACCTATGTCTTTTAAGGCTACAAAGTATATCACAT
TGAATCTCTCCTTCCAAATTCACAAAAAAAATACCAAACTCCCCAATATA
ACCAGGCACATAAGCACACAGCGGCATGAAGCATTCATTATAAATCAACC
ACGAGTAACCACAACAATACACCAATCAGCTCATCCCAGAACTCCTCGTC
ATACTGAGTGAGTATGATGGTCACCAACCAACACTACATATAAATACCGT
TTATAATCACCAAAACTAAATAGCAGTAATCAGAAACCATCAACCACCCC
TATCATCTCTCGTAAATCCATCTTCATCCAACTTCTCATCTTTCCCATTC
CAGCTAACTTTACTCAGCACCCATCTCATCTTAAGAAACAATGTCTAACA
CCACCACCAACCAAACCCTCCTCGCAGCCAAATCCTGGCTCCAGGATTAT
CACTCCTTAGGCGACCAACTCACACCCGAACTCGCCGTTCCCAAATTCTA
TGCTCCAGACTGCGAGATGAGATTCCCAGGCCACTCTCCGATCAAGGGCC
AGGAAGCAATCATCAACTTCTTCAAAGAGCAGTCCACGATCCTGGAGAGC
ATGAAGCATACTATTGGTCATGTGGACGTTCTTCCTGATCGCATCTATCA
GGAGGCGACTATTGAGTACGTTTTGAAGGGTGATGATGAGAAGAAGGTGG
TTAGTGTTCAGGGTATAGCAATCTTTGGGAAGGGGGTGGATGACGATAAG
ATGAGATTTTTCACGGTGTATCTGGATAGGAGTCCTTTGGTGGAGAGGGT
TAGGGTTATTAGTGCTAAGGGTGGTGGTGAGGGGCAGTGAGATCGGATAG
TATAGACATGTTTCGCAAGTGATTGATGTGGCAATGGACTGTGACTTGAG
CTGACTATGTGAAACGTCCTAGACTCTCGGGTATCTGGTGTGAGTTCCGC
ATCGAAATGATTGTTG
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Coding sequence (CDS) from alignment at ch4:1297292..1298257+

>KJC3_004995-T1 ID=KJC3_004995-T1|Name=KJC3_004995-T1|organism=Aspergillus niger KJC3|type=CDS|length=450bp|location=Sequence derived from alignment at ch4:1297292..1298257+ (Aspergillus niger KJC3)
ATGTCTAACACCACCACCAACCAAACCCTCCTCGCAGCCAAATCCTGGCT
CCAGGATTATCACTCCTTAGGCGACCAACTCACACCCGAACTCGCCGTTC
CCAAATTCTATGCTCCAGACTGCGAGATGAGATTCCCAGGCCACTCTCCG
ATCAAGGGCCAGGAAGCAATCATCAACTTCTTCAAAGAGCAGTCCACGAT
CCTGGAGAGCATGAAGCATACTATTGGTCATGTGGACGTTCTTCCTGATC
GCATCTATCAGGAGGCGACTATTGAGTACGTTTTGAAGGGTGATGATGAG
AAGAAGGTGGTTAGTGTTCAGGGTATAGCAATCTTTGGGAAGGGGGTGGA
TGACGATAAGATGAGATTTTTCACGGTGTATCTGGATAGGAGTCCTTTGG
TGGAGAGGGTTAGGGTTATTAGTGCTAAGGGTGGTGGTGAGGGGCAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004995KJC3_004995Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004995-T1KJC3_004995-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004995-T1.utr5p1KJC3_004995-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_004995-T1.utr5p2KJC3_004995-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004995-T1.utr5p3KJC3_004995-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004995-T1.exon1KJC3_004995-T1.exon1Aspergillus niger KJC3exon
KJC3_004995-T1.exon2KJC3_004995-T1.exon2Aspergillus niger KJC3exon
KJC3_004995-T1.exon3KJC3_004995-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004995-T1.cdsKJC3_004995-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004995-T1.utr3p1KJC3_004995-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR037401
DBxrefPFAM:PF12680
DBxrefPFAM:PF02136
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1297292..1298257 +
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