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KJC3_004998-T1, KJC3_004998-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004998-T1
Unique NameKJC3_004998-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1303995..1305549+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004998-T1 ID=KJC3_004998-T1|Name=KJC3_004998-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1555bp|location=Sequence derived from alignment at ch4:1303995..1305549+ (Aspergillus niger KJC3)
CCCTCAACCTCTCTCATTTGTCCCATCCCTGTTTCTACAGCTTCTCCCTT
CGTGTAACCTTCTTCTCTACCTTCCTCTTCACCCATCAACTCCTTCCAAC
CGCCATAATGGCCGAGTCTCAGCGTACGTTCGATTCTTCGAAAGCGGGGG
AAGCAGCCTCAACAGCAGATTACTGATTGCGCTTAACTCACAGGCCGCCC
CCGTGTTTTCTTCGACATCCAGATCGGTAAACAGCAGACCGGTCGCATTG
CTCTTGAACTGGTATGTCTACTTCCTACCTGTCCAACATTTGCCTGTTGT
GCTTGATCCAGTCTCGCTAACTACCCCGCCTATGCAGTTCAACGATGGTA
CCGTGCAGACTCTCCCGTAGAGGAATTACGCGCATATTCCTAACCATGGG
CAAATAGTCGTTCCCAAGACCGCGGAGAATTTCCGGGCTCTGTGCACTGG
CGAAAAGGGCATGGGCAAGCAGGGCAAGCCATTGCACTTCAAAGGTACGG
CGATCCAATCCGGCAGCCTCAATTTTTCCTTCCCCTCCCCCGCTCCGGCG
GGGCCGTGTACACGAAAACTACACGAAAACACCAGAACATCGCTAAACTG
CAGTCTCTGAATAGGCTCCATTTTCCACCGTGTCATCAAGCAGTTCATGA
TCCAGGGTGGTGACTTCACCGCGTTCAACGGCACGGGCGGCGAGTCGATC
TATGGAGAGAAATTCCCCGACGAGAACTTCGACCTTAAGCATGACCGCCC
CTTCCTTCTCTCCATGGCCAACTCCGGCCCCGGCACCAACGGCAGTCAGT
TCTTCATCACAACCGTGCCCACCCCCCACCTGGATGGCAAGCACGTTGTC
TTCGGTGAGGTGATCAACGGCAAGAGCGTTGTCCGCAAGGTCGAGAACAT
GTCGACCCAGGCCGACAAGCCCACCACCGATGTCACTATCGTCGACTGCG
GAGAGCTCACCGGTGACGAGTACGAAAACGCTGATAAGCAGATTCCCGAT
GCGACTGGCGATCCTTATGAGGACTTCCCCGATGACCACCAGGGCGAGGA
GCTGAGCGCCCCTGTCTGCTTCAAGATCGCTTCTGAGCTCAAGAACTTCG
GCAACACCGCTTTCAAGAGCGGAAATCTGACCCTCGGTCTCGAGAAGTAC
CAGAAGGGTTTGCGTTATCTCAACGAGTTCCCCGAGCCCGACGAGCAGGA
CCCCAAGGATCTGGACCCCCAGATGAAGGCCCTCCGCTTCACTCTGCACT
CGAACTCATCTCTGCTTGCTAACAAGCTTGGCCAGTTCAAGAACGGCCAG
ACCTGGGCTACTTATGCTCTCGAAACAGCTGCTGCTGCGAACGCCAAGGA
TGCCGACAAGGCCAAGGCTTACTACCGCCGCGCGGTGGCCTACAGCGGTC
TGAAGGAGGAGGACGAGGCTCTCAAGGATCTCCAGGAGGCTTCTCAGCTG
GCTCCTGGTGATGCTGGCATTACCAACGAGATTGCCCGGGTCAAGAAGGC
CGTCAAGGACCGCCAGGCTCGCGAGAGGGCTACCGCTCAGAAGTTCTTCT
CGTGA
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Coding sequence (CDS) from alignment at ch4:1303995..1305549+

>KJC3_004998-T1 ID=KJC3_004998-T1|Name=KJC3_004998-T1|organism=Aspergillus niger KJC3|type=CDS|length=1950bp|location=Sequence derived from alignment at ch4:1303995..1305549+ (Aspergillus niger KJC3)
ATGGGCAAGCAGGGCAAGCCATTGCACTTCAAAGGCTCCATTTTCCACCG
TGTCATCAAGCAGTTCATGATCCAGGGTGGTGACTTCACCGCGTTCAACG
GCACGGGCGGCGAGTCGATCTATGGAGAGAAATTCCCCGACGAGAACTTC
GACCTTAAGCATGACCGCCCCTTCCTTCTCTCCATGGCCAACTCCGGCCC
CGGCACCAACGGCAGTCAGTTCTTCATCACAACCGTGCCCACCCCCCACC
TGGATGGCAAGCACGTTGTCTTCGGTGAGGTGATCAACGGCAAGAGCGTT
GTCCGCAAGGTCGAGAACATGTCGACCCAGGCCGACAAGCCCACCACCGA
TGTCACTATCGTCGACTGCGGAGAGCTCACCGGTGACGAGTACGAAAACG
CTGATAAGCAGATTCCCGATGCGACTGGCGATCCTTATGAGGACTTCCCC
GATGACCACCAGGGCGAGGAGCTGAGCGCCCCTGTCTGCTTCAAGATCGC
TTCTGAGCTCAAGAACTTCGGCAACACCGCTTTCAAGAGCGGAAATCTGA
CCCTCGGTCTCGAGAAGTACCAGAAGGGTTTGCGTTATCTCAACGAGTTC
CCCGAGCCCGACGAGCAGGACCCCAAGGATCTGGACCCCCAGATGAAGGC
CCTCCGCTTCACTCTGCACTCGAACTCATCTCTGCTTGCTAACAAGCTTG
GCCAGTTCAAGAACGGCCAGACCTGGGCTACTTATGCTCTCGAAACAGCT
GCTGCTGCGAACGCCAAGGATGCCGACAAGGCCAAGGCTTACTACCGCCG
CGCGGTGGCCTACAGCGGTCTGAAGGAGGAGGACGAGGCTCTCAAGGATC
TCCAGGAGGCTTCTCAGCTGGCTCCTGGTGATGCTGGCATTACCAACGAG
ATTGCCCGGGTCAAGAAGGCCGTCAAGGACCGCCAGGCTCGCGAGAGGGC
TACCGCTCAGAAGTTCTTCTCGTGAATGGGCAAGCAGGGCAAGCCATTGC
ACTTCAAAGGCTCCATTTTCCACCGTGTCATCAAGCAGTTCATGATCCAG
GGTGGTGACTTCACCGCGTTCAACGGCACGGGCGGCGAGTCGATCTATGG
AGAGAAATTCCCCGACGAGAACTTCGACCTTAAGCATGACCGCCCCTTCC
TTCTCTCCATGGCCAACTCCGGCCCCGGCACCAACGGCAGTCAGTTCTTC
ATCACAACCGTGCCCACCCCCCACCTGGATGGCAAGCACGTTGTCTTCGG
TGAGGTGATCAACGGCAAGAGCGTTGTCCGCAAGGTCGAGAACATGTCGA
CCCAGGCCGACAAGCCCACCACCGATGTCACTATCGTCGACTGCGGAGAG
CTCACCGGTGACGAGTACGAAAACGCTGATAAGCAGATTCCCGATGCGAC
TGGCGATCCTTATGAGGACTTCCCCGATGACCACCAGGGCGAGGAGCTGA
GCGCCCCTGTCTGCTTCAAGATCGCTTCTGAGCTCAAGAACTTCGGCAAC
ACCGCTTTCAAGAGCGGAAATCTGACCCTCGGTCTCGAGAAGTACCAGAA
GGGTTTGCGTTATCTCAACGAGTTCCCCGAGCCCGACGAGCAGGACCCCA
AGGATCTGGACCCCCAGATGAAGGCCCTCCGCTTCACTCTGCACTCGAAC
TCATCTCTGCTTGCTAACAAGCTTGGCCAGTTCAAGAACGGCCAGACCTG
GGCTACTTATGCTCTCGAAACAGCTGCTGCTGCGAACGCCAAGGATGCCG
ACAAGGCCAAGGCTTACTACCGCCGCGCGGTGGCCTACAGCGGTCTGAAG
GAGGAGGACGAGGCTCTCAAGGATCTCCAGGAGGCTTCTCAGCTGGCTCC
TGGTGATGCTGGCATTACCAACGAGATTGCCCGGGTCAAGAAGGCCGTCA
AGGACCGCCAGGCTCGCGAGAGGGCTACCGCTCAGAAGTTCTTCTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CPR6KJC3_004998Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004998-T1KJC3_004998-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004998-T1.utr5p1KJC3_004998-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_004998-T1.utr5p2KJC3_004998-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004998-T1.utr5p3KJC3_004998-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004998-T1.exon1KJC3_004998-T1.exon1Aspergillus niger KJC3exon
KJC3_004998-T1.exon2KJC3_004998-T1.exon2Aspergillus niger KJC3exon
KJC3_004998-T1.exon3KJC3_004998-T1.exon3Aspergillus niger KJC3exon
KJC3_004998-T1.exon4KJC3_004998-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004998-T1.cdsKJC3_004998-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR020892
DBxrefInterPro:IPR013105
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR029000
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR002130
DBxrefPFAM:PF07719
DBxrefPFAM:PF00160
Productpeptidyl-prolyl cis-trans isomerase cpr6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1303995..1305549 +
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