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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1326564..1328118- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005005-T1 ID=KJC3_005005-T1|Name=KJC3_005005-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1555bp|location=Sequence derived from alignment at ch4:1326564..1328118- (Aspergillus niger KJC3)
TCTCTACTCACTCACTCACCTTCTACACTCGCTCCTTAACCCAACTCCAA
ACAATGCCCCAATAGCTTCACACAACCGACACCCTGGAAAGAAACCAGAA
ACAATGCCCCCCACAACCCTCGAAATCAGCATCCCCACAACCAGCATCTC
CGCAACCCAACCCCCCTACACCCTCTACAACATCACCCTCCGCCTTCCCC
TCCGCTCATTCACCATCTCCAAGCGCTACTCCGAATTCACCACCTTCCAC
AACACCCTAGTTTCGCAAACAAACCTTCCACCACCCGCCCCTCTCCCGCC
CAAATCCTGGTTCCAGAATACCATCAACAACGCCACCCTCCGCGAATCCC
GCCGCGAAGCACTAGAAGCCTACCTCCGGGCTATCAACGAAAGCGAAGAT
CCCCGATGGCGCAACAGTCCTGCGTGGCGGGCGTTCCTCAATCTTCCTAG
TTTGCCTTCGAATAATAATAATAACAATGGCGGGGCAAGTACACGGCTCC
ACGCGGCAATCACTGACCCCGGCGACTCGGAAGGCGGAGGCATTACGGAC
CCGATCCTCTGGCTCGATTGCTTCAGGGACATGAAGGGGCATTTACACGA
TGCGAGATTGTATCTTACGAGACGGGACCAGGAGACCACGCCGCAGCGAC
AACATGAGAGTTCGGCGAGGGCGAAGAGCGAGCTTGTTAGGGCCGGGGGG
TTGATTGCGAGTTTGGAGAGTGGGTTGAGGAATTTGAGTAACTCTCCTTC
TGGAGGTGGGGAGGAAAATAATGCAGGGTCAAGACCAGGAAGTAAACTCG
GGCGCAGAAACACAGCTACGACCGCCACGGCGTGGAGTGTTAGTGGGAAC
AACACGCTCGGGGAAGGAGAGATGCGACGACGGAAGGATTTACTCATCAA
CGCGAGGAAGGAGAAAGATGGACTGGAGGATCTGTTGAATGCGATGGCGG
CGAAGAGTCGGATTGATAGTGCGGTGGCGTCGATTCAGGATAAGGAGGCG
TTGATGGGGACGCAGGGGGGCAAGAAGGCGATTCGGTCGTCGGGGAGAGT
GTTGGGGAGGGAGACGGAGAGGACGCGCGAGTTGGATAATAGTGGGGTGG
TGCAGTTGCAGAAGCAGATGATGGAGGATCAGGATGTCGCGGTGGATGAG
TTGATGAGGATTGTCAATCGGCAGAAGGAGTTGGGGATTGCAATTAACAA
TGAGTTGCAGGTGCAGAATGAGTTGTTGAATTTGGCGGATGAGGATGCTA
CGAGGTATGTTCTTTTTTCCCATCTTGTTCTTACTTTTTGATGGGAAAGT
TGTGCTGACTTGAATACAGGTTGGGTGGGAAGATTGATATTGGGAAGAAG
AGGATTGGGAGAATTTCTTGAGTGTGTGGATATGATGGTTGTTTGCGATG
TCTATTCCTACTCATGGTCATGATTGATATCCCGTATATTGTTCATCGAA
TTTGGTATTATATGTTATGTGTGTTACATTTGGCATGGGATAAGCCTTGT
TACTTAGCGCAGGGTTATCGTGAATATTGTACTCTAGCGAGCACAGTCAT
GCAGC back to topCoding sequence (CDS) from alignment at ch4:1326564..1328118- >KJC3_005005-T1 ID=KJC3_005005-T1|Name=KJC3_005005-T1|organism=Aspergillus niger KJC3|type=CDS|length=2406bp|location=Sequence derived from alignment at ch4:1326564..1328118- (Aspergillus niger KJC3)
GTTGGGTGGGAAGATTGATATTGGGAAGAAGAGGATTGGGAGAATTTCTT
GAATGCCCCCCACAACCCTCGAAATCAGCATCCCCACAACCAGCATCTCC
GCAACCCAACCCCCCTACACCCTCTACAACATCACCCTCCGCCTTCCCCT
CCGCTCATTCACCATCTCCAAGCGCTACTCCGAATTCACCACCTTCCACA
ACACCCTAGTTTCGCAAACAAACCTTCCACCACCCGCCCCTCTCCCGCCC
AAATCCTGGTTCCAGAATACCATCAACAACGCCACCCTCCGCGAATCCCG
CCGCGAAGCACTAGAAGCCTACCTCCGGGCTATCAACGAAAGCGAAGATC
CCCGATGGCGCAACAGTCCTGCGTGGCGGGCGTTCCTCAATCTTCCTAGT
TTGCCTTCGAATAATAATAATAACAATGGCGGGGCAAGTACACGGCTCCA
CGCGGCAATCACTGACCCCGGCGACTCGGAAGGCGGAGGCATTACGGACC
CGATCCTCTGGCTCGATTGCTTCAGGGACATGAAGGGGCATTTACACGAT
GCGAGATTGTATCTTACGAGACGGGACCAGGAGACCACGCCGCAGCGACA
ACATGAGAGTTCGGCGAGGGCGAAGAGCGAGCTTGTTAGGGCCGGGGGGT
TGATTGCGAGTTTGGAGAGTGGGTTGAGGAATTTGAGTAACTCTCCTTCT
GGAGGTGGGGAGGAAAATAATGCAGGGTCAAGACCAGGAAGTAAACTCGG
GCGCAGAAACACAGCTACGACCGCCACGGCGTGGAGTGTTAGTGGGAACA
ACACGCTCGGGGAAGGAGAGATGCGACGACGGAAGGATTTACTCATCAAC
GCGAGGAAGGAGAAAGATGGACTGGAGGATCTGTTGAATGCGATGGCGGC
GAAGAGTCGGATTGATAGTGCGGTGGCGTCGATTCAGGATAAGGAGGCGT
TGATGGGGACGCAGGGGGGCAAGAAGGCGATTCGGTCGTCGGGGAGAGTG
TTGGGGAGGGAGACGGAGAGGACGCGCGAGTTGGATAATAGTGGGGTGGT
GCAGTTGCAGAAGCAGATGATGGAGGATCAGGATGTCGCGGTGGATGAGT
TGATGAGGATTGTCAATCGGCAGAAGGAGTTGGGGATTGCAATTAACAAT
GAGTTGCAGGTGCAGAATGAGTTGTTGAATTTGGCGGATGAGGATGCTAC
GAGGTTGGGTGGGAAGATTGATATTGGGAAGAAGAGGATTGGGAGAATTT
CTTGAATGCCCCCCACAACCCTCGAAATCAGCATCCCCACAACCAGCATC
TCCGCAACCCAACCCCCCTACACCCTCTACAACATCACCCTCCGCCTTCC
CCTCCGCTCATTCACCATCTCCAAGCGCTACTCCGAATTCACCACCTTCC
ACAACACCCTAGTTTCGCAAACAAACCTTCCACCACCCGCCCCTCTCCCG
CCCAAATCCTGGTTCCAGAATACCATCAACAACGCCACCCTCCGCGAATC
CCGCCGCGAAGCACTAGAAGCCTACCTCCGGGCTATCAACGAAAGCGAAG
ATCCCCGATGGCGCAACAGTCCTGCGTGGCGGGCGTTCCTCAATCTTCCT
AGTTTGCCTTCGAATAATAATAATAACAATGGCGGGGCAAGTACACGGCT
CCACGCGGCAATCACTGACCCCGGCGACTCGGAAGGCGGAGGCATTACGG
ACCCGATCCTCTGGCTCGATTGCTTCAGGGACATGAAGGGGCATTTACAC
GATGCGAGATTGTATCTTACGAGACGGGACCAGGAGACCACGCCGCAGCG
ACAACATGAGAGTTCGGCGAGGGCGAAGAGCGAGCTTGTTAGGGCCGGGG
GGTTGATTGCGAGTTTGGAGAGTGGGTTGAGGAATTTGAGTAACTCTCCT
TCTGGAGGTGGGGAGGAAAATAATGCAGGGTCAAGACCAGGAAGTAAACT
CGGGCGCAGAAACACAGCTACGACCGCCACGGCGTGGAGTGTTAGTGGGA
ACAACACGCTCGGGGAAGGAGAGATGCGACGACGGAAGGATTTACTCATC
AACGCGAGGAAGGAGAAAGATGGACTGGAGGATCTGTTGAATGCGATGGC
GGCGAAGAGTCGGATTGATAGTGCGGTGGCGTCGATTCAGGATAAGGAGG
CGTTGATGGGGACGCAGGGGGGCAAGAAGGCGATTCGGTCGTCGGGGAGA
GTGTTGGGGAGGGAGACGGAGAGGACGCGCGAGTTGGATAATAGTGGGGT
GGTGCAGTTGCAGAAGCAGATGATGGAGGATCAGGATGTCGCGGTGGATG
AGTTGATGAGGATTGTCAATCGGCAGAAGGAGTTGGGGATTGCAATTAAC
AATGAGTTGCAGGTGCAGAATGAGTTGTTGAATTTGGCGGATGAGGATGC
TACGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0035091 | phosphatidylinositol binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005005-T1.utr3p1 | KJC3_005005-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005005-T1.utr5p1 | KJC3_005005-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036871 |
| DBxref | InterPro:IPR000727 |
| DBxref | InterPro:IPR001683 |
| DBxref | PFAM:PF00787 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1326564..1328118 - |
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