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KJC3_005008-T1, KJC3_005008-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005008-T1
Unique NameKJC3_005008-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1332322..1333964-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005008-T1 ID=KJC3_005008-T1|Name=KJC3_005008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1643bp|location=Sequence derived from alignment at ch4:1332322..1333964- (Aspergillus niger KJC3)
CCGCACGCCTCTCCTCCGGCCTGTGCTTCTGCAGCTCCCTGTCCACCGGA
CGACTCCCATCCGCTCAATTGTATTCGTTCACCGCTGTTGCTTGCTACTC
TCCATTTCTACTCATTAGATTATACTCTTCACACTTCGAGTATGCGATCG
CAGTCTCTTTGGCGCTCCCTTGCGCTGTTGCAGAGTGCTTCCACCCGCTC
CTTTGTAAACACTGGTTCGGGCCGACGTGCCTTTCAGACTGCCAATTCCC
GCGTCCCCGACTTCGCCTTTGCATTTGAGTGAGTAAGCGAATTCCACCCG
CGCTGGCTTAACATATAGTCTGACTGGGGTGTTTAGCATTGATGGTGTGC
TGCTACGATCCTCTAAGCCTATTCCCGGAGCCGCCGAATCCCTAGCCCTT
CTGAAAGAGCAGAACATCCCGTTTCTCCTATTGACAAATGGTGGTGGGAA
ACATGAAACGGAGCGAGTGGCGGAAATCAGCGAGAAACTGAAGGTTCCAT
TGGAACCGGAGGTAATTGTTCAGAGCCATTCGCCTTTTGCGGAGCTTGTG
CGCGGGCCAGACGAGCAGAGTGCCCTGGAGAACAAATGCGTGCTGGTGGT
TGGAGGAGAAGGCGACCGTTGCCGCCAGGTAGCGCAGATGTACGCAAGCC
TATGGTTATCCTATACAGTTTGTGGATTATAATGCTAACCATGGGTTCAG
GTACGGCTTCAAGAACGTGGTGACACCCGGCGACATCTACATGGCGAACC
CATCTATCTGGCCCTTTCGGTCTTTCAAGAGCTACTACGAGAAGATCTCT
AAGCCGTTGCCAAACCCAAAGGATCCCAATGACCCTTCGAGAGGGTTGAA
GATCGACGCGATCTTTGTCTTCAATGACCCACGGGACTGGGCTCTCGACG
CTCAGATCATCACCGACATCCTCCTATCGTCGGAAGGCGTGATAGGTACC
ATCTCTGAAAAGAACGGTCGGACTGATCTCCCAAATCGGGGTTTCCAACA
AGATGGGCAGCCACATCTGTACTTTTCGAATCCAGACCTTTGGTGGGCTG
CAGCCTACCACCTTCCTCGTCTCGGCCAAGGAGGATTCCGTGAGGCGCTG
GAAGGCATTTGGGCTGCAGTTACAGGAGGCCCGGCCAAAGGCGTGGAGCT
GAAGAAGACCATCATTGGCAAGCCTTATCAGGGAACGTACGAGTTTGCGG
AGCATCAACTCTTGCGCAACCGTGCCAGAGTCTTCGGTTCGGATGCCCAG
CAGCCTTTGCGAAACGTCTATATGATCGGAGACAACCCGGAGTCAGACAT
CCGTGGCGCTAACAGCTACCGGAGTGAGCATGGCAGCAAGTGGCACTCGA
TTCTGGTGCGAACTGGTGTCTACAATGGTGGTGAGCCAGCGTGGACTCCG
ACGACGATCGCTGATAACGTGCACAAGGCAGTTGAGTGGGCGTTGAAGAA
CTCTCAGTGGCGGTCTTAAGAGGGAACAGAGTAGATTTTTGTGGTTGTCC
TCCTTTTTTTGAGCGAGCGTTTGTTAAGTAGACTGCAATTGCATCTGCAA
GCATAGCGAATAGACCATCATGTTTGTATCTAGTATAGCGACTAGTAACT
ATGCAGTGCATTGTTATATAATCATCCAGCATGACAAGCATCC
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Coding sequence (CDS) from alignment at ch4:1332322..1333964-

>KJC3_005008-T1 ID=KJC3_005008-T1|Name=KJC3_005008-T1|organism=Aspergillus niger KJC3|type=CDS|length=3627bp|location=Sequence derived from alignment at ch4:1332322..1333964- (Aspergillus niger KJC3)
GTACGGCTTCAAGAACGTGGTGACACCCGGCGACATCTACATGGCGAACC
CATCTATCTGGCCCTTTCGGTCTTTCAAGAGCTACTACGAGAAGATCTCT
AAGCCGTTGCCAAACCCAAAGGATCCCAATGACCCTTCGAGAGGGTTGAA
GATCGACGCGATCTTTGTCTTCAATGACCCACGGGACTGGGCTCTCGACG
CTCAGATCATCACCGACATCCTCCTATCGTCGGAAGGCGTGATAGGTACC
ATCTCTGAAAAGAACGGTCGGACTGATCTCCCAAATCGGGGTTTCCAACA
AGATGGGCAGCCACATCTGTACTTTTCGAATCCAGACCTTTGGTGGGCTG
CAGCCTACCACCTTCCTCGTCTCGGCCAAGGAGGATTCCGTGAGGCGCTG
GAAGGCATTTGGGCTGCAGTTACAGGAGGCCCGGCCAAAGGCGTGGAGCT
GAAGAAGACCATCATTGGCAAGCCTTATCAGGGAACGTACGAGTTTGCGG
AGCATCAACTCTTGCGCAACCGTGCCAGAGTCTTCGGTTCGGATGCCCAG
CAGCCTTTGCGAAACGTCTATATGATCGGAGACAACCCGGAGTCAGACAT
CCGTGGCGCTAACAGCTACCGGAGTGAGCATGGCAGCAAGTGGCACTCGA
TTCTGGTGCGAACTGGTGTCTACAATGGTGGTGAGCCAGCGTGGACTCCG
ACGACGATCGCTGATAACGTGCACAAGGCAGTTGAGTGGGCGTTGAAGAA
CTCTCAGTGGCGGTCTTAACATTGATGGTGTGCTGCTACGATCCTCTAAG
CCTATTCCCGGAGCCGCCGAATCCCTAGCCCTTCTGAAAGAGCAGAACAT
CCCGTTTCTCCTATTGACAAATGGTGGTGGGAAACATGAAACGGAGCGAG
TGGCGGAAATCAGCGAGAAACTGAAGGTTCCATTGGAACCGGAGGTAATT
GTTCAGAGCCATTCGCCTTTTGCGGAGCTTGTGCGCGGGCCAGACGAGCA
GAGTGCCCTGGAGAACAAATGCGTGCTGGTGGTTGGAGGAGAAGGCGACC
GTTGCCGCCAGGTAGCGCAGATATGCGATCGCAGTCTCTTTGGCGCTCCC
TTGCGCTGTTGCAGAGTGCTTCCACCCGCTCCTTTGTAAACACTGGTTCG
GGCCGACGTGCCTTTCAGACTGCCAATTCCCGCGTCCCCGACTTCGCCTT
TGCATTTGAGTACGGCTTCAAGAACGTGGTGACACCCGGCGACATCTACA
TGGCGAACCCATCTATCTGGCCCTTTCGGTCTTTCAAGAGCTACTACGAG
AAGATCTCTAAGCCGTTGCCAAACCCAAAGGATCCCAATGACCCTTCGAG
AGGGTTGAAGATCGACGCGATCTTTGTCTTCAATGACCCACGGGACTGGG
CTCTCGACGCTCAGATCATCACCGACATCCTCCTATCGTCGGAAGGCGTG
ATAGGTACCATCTCTGAAAAGAACGGTCGGACTGATCTCCCAAATCGGGG
TTTCCAACAAGATGGGCAGCCACATCTGTACTTTTCGAATCCAGACCTTT
GGTGGGCTGCAGCCTACCACCTTCCTCGTCTCGGCCAAGGAGGATTCCGT
GAGGCGCTGGAAGGCATTTGGGCTGCAGTTACAGGAGGCCCGGCCAAAGG
CGTGGAGCTGAAGAAGACCATCATTGGCAAGCCTTATCAGGGAACGTACG
AGTTTGCGGAGCATCAACTCTTGCGCAACCGTGCCAGAGTCTTCGGTTCG
GATGCCCAGCAGCCTTTGCGAAACGTCTATATGATCGGAGACAACCCGGA
GTCAGACATCCGTGGCGCTAACAGCTACCGGAGTGAGCATGGCAGCAAGT
GGCACTCGATTCTGGTGCGAACTGGTGTCTACAATGGTGGTGAGCCAGCG
TGGACTCCGACGACGATCGCTGATAACGTGCACAAGGCAGTTGAGTGGGC
GTTGAAGAACTCTCAGTGGCGGTCTTAACATTGATGGTGTGCTGCTACGA
TCCTCTAAGCCTATTCCCGGAGCCGCCGAATCCCTAGCCCTTCTGAAAGA
GCAGAACATCCCGTTTCTCCTATTGACAAATGGTGGTGGGAAACATGAAA
CGGAGCGAGTGGCGGAAATCAGCGAGAAACTGAAGGTTCCATTGGAACCG
GAGGTAATTGTTCAGAGCCATTCGCCTTTTGCGGAGCTTGTGCGCGGGCC
AGACGAGCAGAGTGCCCTGGAGAACAAATGCGTGCTGGTGGTTGGAGGAG
AAGGCGACCGTTGCCGCCAGGTAGCGCAGATATGCGATCGCAGTCTCTTT
GGCGCTCCCTTGCGCTGTTGCAGAGTGCTTCCACCCGCTCCTTTGTAAAC
ACTGGTTCGGGCCGACGTGCCTTTCAGACTGCCAATTCCCGCGTCCCCGA
CTTCGCCTTTGCATTTGAGTACGGCTTCAAGAACGTGGTGACACCCGGCG
ACATCTACATGGCGAACCCATCTATCTGGCCCTTTCGGTCTTTCAAGAGC
TACTACGAGAAGATCTCTAAGCCGTTGCCAAACCCAAAGGATCCCAATGA
CCCTTCGAGAGGGTTGAAGATCGACGCGATCTTTGTCTTCAATGACCCAC
GGGACTGGGCTCTCGACGCTCAGATCATCACCGACATCCTCCTATCGTCG
GAAGGCGTGATAGGTACCATCTCTGAAAAGAACGGTCGGACTGATCTCCC
AAATCGGGGTTTCCAACAAGATGGGCAGCCACATCTGTACTTTTCGAATC
CAGACCTTTGGTGGGCTGCAGCCTACCACCTTCCTCGTCTCGGCCAAGGA
GGATTCCGTGAGGCGCTGGAAGGCATTTGGGCTGCAGTTACAGGAGGCCC
GGCCAAAGGCGTGGAGCTGAAGAAGACCATCATTGGCAAGCCTTATCAGG
GAACGTACGAGTTTGCGGAGCATCAACTCTTGCGCAACCGTGCCAGAGTC
TTCGGTTCGGATGCCCAGCAGCCTTTGCGAAACGTCTATATGATCGGAGA
CAACCCGGAGTCAGACATCCGTGGCGCTAACAGCTACCGGAGTGAGCATG
GCAGCAAGTGGCACTCGATTCTGGTGCGAACTGGTGTCTACAATGGTGGT
GAGCCAGCGTGGACTCCGACGACGATCGCTGATAACGTGCACAAGGCAGT
TGAGTGGGCGTTGAAGAACTCTCAGTGGCGGTCTTAACATTGATGGTGTG
CTGCTACGATCCTCTAAGCCTATTCCCGGAGCCGCCGAATCCCTAGCCCT
TCTGAAAGAGCAGAACATCCCGTTTCTCCTATTGACAAATGGTGGTGGGA
AACATGAAACGGAGCGAGTGGCGGAAATCAGCGAGAAACTGAAGGTTCCA
TTGGAACCGGAGGTAATTGTTCAGAGCCATTCGCCTTTTGCGGAGCTTGT
GCGCGGGCCAGACGAGCAGAGTGCCCTGGAGAACAAATGCGTGCTGGTGG
TTGGAGGAGAAGGCGACCGTTGCCGCCAGGTAGCGCAGATATGCGATCGC
AGTCTCTTTGGCGCTCCCTTGCGCTGTTGCAGAGTGCTTCCACCCGCTCC
TTTGTAAACACTGGTTCGGGCCGACGTGCCTTTCAGACTGCCAATTCCCG
CGTCCCCGACTTCGCCTTTGCATTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005008KJC3_005008Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005008-T1KJC3_005008-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005008-T1.cdsKJC3_005008-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005008-T1.utr3p1KJC3_005008-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005008-T1.exon3KJC3_005008-T1.exon3Aspergillus niger KJC3exon
KJC3_005008-T1.exon2KJC3_005008-T1.exon2Aspergillus niger KJC3exon
KJC3_005008-T1.exon1KJC3_005008-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005008-T1.utr5p1KJC3_005008-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR006353
DBxrefInterPro:IPR023214
DBxrefInterPro:IPR006357
DBxrefPFAM:PF13242
DBxrefPFAM:PF13344
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1332322..1333964 -
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