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KJC3_005012-T1, KJC3_005012-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005012-T1
Unique NameKJC3_005012-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1341331..1343269+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005012-T1 ID=KJC3_005012-T1|Name=KJC3_005012-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1939bp|location=Sequence derived from alignment at ch4:1341331..1343269+ (Aspergillus niger KJC3)
CTCCAGAGCAATATAACAAATAGCTTGCATATGAGTTCAGTTGCCTGAGA
ATCAATATTCGGTCGATCGCTGCAATCCATCTCCAATGACAGCCGGGAGC
GTGATGCCCCTCGGAGGCTCCAAGTCTGGCTATAATTGGCTTGGGCGCTG
CCACCGGGCGGGATTGTCATTGCGCGGTTCCATCCCGAGTCCGTCGCTGC
CGTGATTACAATTCTAGGCCCGGCTGACTCTCTCCCTCCCTACCCTTGGG
GTTTATACCTCCTCATCAATCCACAGGAACAGCACATCTTGTACCTTTCA
TCTCTCTGTGACAAAGCGAGATGGATTATTCGTTCTATTCAAACCATCCC
CAGCAACCTTATCCTCTCTACGGCGTCCACGGGCTGCCCACCCCCGACCA
AGGCAATCCGGCCCCTCAAGCCGAGGCCATACAGGGCGCTTTCGCTCCCT
TGGTCGGTCTCTCTTGTTTTTGTGGACACTAGTCATATAAATTGCTCATG
ACGCTGACTTGTGGAAAGGGAGCGCAAAACTACCAGCCTTTCGATCCGAA
CCTGCGCTTTCAGGATCCTCACGCAGCCGCTGCCTTCGTTGCCCCGCCAC
ACTCGCCTCCCGAGTCCCTCACCAAGCAGTCGGTTTCCAGCAATGACTAC
TCCAATCAGAACGTTGATCGAGCCTCTTACGATGGAGATGACCAGCTCTT
AGACCAAAGTCTTGGCCGGAGCAGCAGCGAGGAGAAAGAGAGTCTGACTC
CGGCGCAATCAAAGCGAAAGGCTCAGAACAGAGCTGCGTGAGTGGTTCCA
GATCTAGGACTGCGTTATATCCCCTGAAACTAATCTCTGGTTACTGAAAT
CAGCCAGCGCGCATTTCGTGAACGCAAGGAACGACATGTGCGTGAACTGG
AGGAGAAAGTTAGCAATCTTGAAAATGCATCGAACACTCTTGTAGCGGAC
AATGAGCGATTGAAAAGAGAGTTGGCAAAGTTCACAACTGAAAATGAAAT
ACTTCGGGCAACGTCGACTTCAATGCGCCAGTCCGGCCAGCGCTCCACCG
ATGAGGAACCGACAACGACGGGGCCATTGCAATACTCGCCCACGGATTTC
AAGTCCGATGCCGGTGGGGGTAATGGCCCTGCCCATCGCGTCACTATATG
CGGAAAGACAGGCGAGAAACTCCTTGACGCGGGAGCCACCTGGGATCTCA
TCCAGAAGCACGAGCTCTTCAAGCGTGGCCTAGTGAATATTGGCGATGTC
TCGGGTCGGTTGCAAGGTACTGCTCAATGCGACGGGCAGGGGCCTGCCTT
CCGGGAAAGCCAGGTCCTCCAGGCTATTGAAGAAAGTGCAGCTGCTGGCA
ACGATGACTTGTTGTGAATTCGCCTGATAGCATGGATTCTACGATGCAAT
GTCTTGCTTCTTGGTCGCTTTCTTATTTTTTTTTTCTTTTCGGTGCATGG
GCGTCAGGGTTTGTTTCGGAGTAAATACCGCTTTTCACAAGCTTCATGGA
ACATATGCTGCCATCTGCTACTATTTTGTGAAGTGAAGGACCCCGCCGAG
TCCTTCCTGGAGTCATTGGAGATTGAGGAGTGAGCCATTATACCTACTTA
CTGCTACCAAAGTTGTTGAATTGAATGGATGTCTTTGTTCCGAGGTTTCA
GACTACTATTGGTTGATACTCTAAAGTGTTTTGTTTGCTCAGAGCTACGT
AGGACTGCATATGCGTTGCCACGGGTTCTGTAATATGCGCTATCTGGAGC
AAAGCCTTACCCCATGCTGTGCCATAACGCAACAAGGACCTGACAGATTG
AAGTCCATTGATACCTTACAAGGCATGTTTGCTCGACGGTCGACGTTTAT
TATGGCCCAGTTGGTTCTGAACCCCTACTGCAATACAATAGCCCTTACCT
TGTCAGCTGTACTATGATAGTAATCGAACTGACTCTACT
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Coding sequence (CDS) from alignment at ch4:1341331..1343269+

>KJC3_005012-T1 ID=KJC3_005012-T1|Name=KJC3_005012-T1|organism=Aspergillus niger KJC3|type=CDS|length=2745bp|location=Sequence derived from alignment at ch4:1341331..1343269+ (Aspergillus niger KJC3)
ATGGATTATTCGTTCTATTCAAACCATCCCCAGCAACCTTATCCTCTCTA
CGGCGTCCACGGGCTGCCCACCCCCGACCAAGGCAATCCGGCCCCTCAAG
CCGAGGCCATACAGGGCGCTTTCGCTCCCTTGGGAGCGCAAAACTACCAG
CCTTTCGATCCGAACCTGCGCTTTCAGGATCCTCACGCAGCCGCTGCCTT
CGTTGCCCCGCCACACTCGCCTCCCGAGTCCCTCACCAAGCAGTCGGTTT
CCAGCAATGACTACTCCAATCAGAACGTTGATCGAGCCTCTTACGATGGA
GATGACCAGCTCTTAGACCAAAGTCTTGGCCGGAGCAGCAGCGAGGAGAA
AGAGAGTCTGACTCCGGCGCAATCAAAGCGAAAGGCTCAGAACAGAGCTG
CCCAGCGCGCATTTCGTGAACGCAAGGAACGACATGTGCGTGAACTGGAG
GAGAAAGTTAGCAATCTTGAAAATGCATCGAACACTCTTGTAGCGGACAA
TGAGCGATTGAAAAGAGAGTTGGCAAAGTTCACAACTGAAAATGAAATAC
TTCGGGCAACGTCGACTTCAATGCGCCAGTCCGGCCAGCGCTCCACCGAT
GAGGAACCGACAACGACGGGGCCATTGCAATACTCGCCCACGGATTTCAA
GTCCGATGCCGGTGGGGGTAATGGCCCTGCCCATCGCGTCACTATATGCG
GAAAGACAGGCGAGAAACTCCTTGACGCGGGAGCCACCTGGGATCTCATC
CAGAAGCACGAGCTCTTCAAGCGTGGCCTAGTGAATATTGGCGATGTCTC
GGGTCGGTTGCAAGGTACTGCTCAATGCGACGGGCAGGGGCCTGCCTTCC
GGGAAAGCCAGGTCCTCCAGGCTATTGAAGAAAGTGCAGCTGCTGGCAAC
GATGACTTGTTGTGAATGGATTATTCGTTCTATTCAAACCATCCCCAGCA
ACCTTATCCTCTCTACGGCGTCCACGGGCTGCCCACCCCCGACCAAGGCA
ATCCGGCCCCTCAAGCCGAGGCCATACAGGGCGCTTTCGCTCCCTTGGGA
GCGCAAAACTACCAGCCTTTCGATCCGAACCTGCGCTTTCAGGATCCTCA
CGCAGCCGCTGCCTTCGTTGCCCCGCCACACTCGCCTCCCGAGTCCCTCA
CCAAGCAGTCGGTTTCCAGCAATGACTACTCCAATCAGAACGTTGATCGA
GCCTCTTACGATGGAGATGACCAGCTCTTAGACCAAAGTCTTGGCCGGAG
CAGCAGCGAGGAGAAAGAGAGTCTGACTCCGGCGCAATCAAAGCGAAAGG
CTCAGAACAGAGCTGCCCAGCGCGCATTTCGTGAACGCAAGGAACGACAT
GTGCGTGAACTGGAGGAGAAAGTTAGCAATCTTGAAAATGCATCGAACAC
TCTTGTAGCGGACAATGAGCGATTGAAAAGAGAGTTGGCAAAGTTCACAA
CTGAAAATGAAATACTTCGGGCAACGTCGACTTCAATGCGCCAGTCCGGC
CAGCGCTCCACCGATGAGGAACCGACAACGACGGGGCCATTGCAATACTC
GCCCACGGATTTCAAGTCCGATGCCGGTGGGGGTAATGGCCCTGCCCATC
GCGTCACTATATGCGGAAAGACAGGCGAGAAACTCCTTGACGCGGGAGCC
ACCTGGGATCTCATCCAGAAGCACGAGCTCTTCAAGCGTGGCCTAGTGAA
TATTGGCGATGTCTCGGGTCGGTTGCAAGGTACTGCTCAATGCGACGGGC
AGGGGCCTGCCTTCCGGGAAAGCCAGGTCCTCCAGGCTATTGAAGAAAGT
GCAGCTGCTGGCAACGATGACTTGTTGTGAATGGATTATTCGTTCTATTC
AAACCATCCCCAGCAACCTTATCCTCTCTACGGCGTCCACGGGCTGCCCA
CCCCCGACCAAGGCAATCCGGCCCCTCAAGCCGAGGCCATACAGGGCGCT
TTCGCTCCCTTGGGAGCGCAAAACTACCAGCCTTTCGATCCGAACCTGCG
CTTTCAGGATCCTCACGCAGCCGCTGCCTTCGTTGCCCCGCCACACTCGC
CTCCCGAGTCCCTCACCAAGCAGTCGGTTTCCAGCAATGACTACTCCAAT
CAGAACGTTGATCGAGCCTCTTACGATGGAGATGACCAGCTCTTAGACCA
AAGTCTTGGCCGGAGCAGCAGCGAGGAGAAAGAGAGTCTGACTCCGGCGC
AATCAAAGCGAAAGGCTCAGAACAGAGCTGCCCAGCGCGCATTTCGTGAA
CGCAAGGAACGACATGTGCGTGAACTGGAGGAGAAAGTTAGCAATCTTGA
AAATGCATCGAACACTCTTGTAGCGGACAATGAGCGATTGAAAAGAGAGT
TGGCAAAGTTCACAACTGAAAATGAAATACTTCGGGCAACGTCGACTTCA
ATGCGCCAGTCCGGCCAGCGCTCCACCGATGAGGAACCGACAACGACGGG
GCCATTGCAATACTCGCCCACGGATTTCAAGTCCGATGCCGGTGGGGGTA
ATGGCCCTGCCCATCGCGTCACTATATGCGGAAAGACAGGCGAGAAACTC
CTTGACGCGGGAGCCACCTGGGATCTCATCCAGAAGCACGAGCTCTTCAA
GCGTGGCCTAGTGAATATTGGCGATGTCTCGGGTCGGTTGCAAGGTACTG
CTCAATGCGACGGGCAGGGGCCTGCCTTCCGGGAAAGCCAGGTCCTCCAG
GCTATTGAAGAAAGTGCAGCTGCTGGCAACGATGACTTGTTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005012KJC3_005012Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005012-T1KJC3_005012-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005012-T1.utr5p1KJC3_005012-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005012-T1.exon1KJC3_005012-T1.exon1Aspergillus niger KJC3exon
KJC3_005012-T1.exon2KJC3_005012-T1.exon2Aspergillus niger KJC3exon
KJC3_005012-T1.exon3KJC3_005012-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005012-T1.cdsKJC3_005012-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005012-T1.utr3p1KJC3_005012-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefPFAM:PF00170
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1341331..1343269 +
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