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KJC3_005019-T1, KJC3_005019-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005019-T1
Unique NameKJC3_005019-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1371522..1372931-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005019-T1 ID=KJC3_005019-T1|Name=KJC3_005019-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1410bp|location=Sequence derived from alignment at ch4:1371522..1372931- (Aspergillus niger KJC3)
TGGAGCTGTCTCAATGGCATGACGTGGATGACATCCCGATCCTCGCTTTC
CATTTCCTCCATCATCCCACACCATCAGCTCAGATGCTGGTACAAACGTC
ATCCTCCGCGGTAGTTCGTTCCATTGTCCTGCCCTTTGTGGTGACAAGCA
TGGGTGGCTTCCATCCCCGCCAGACGTTCACAATGGACTGGGACCTTATT
TGAACGTGTGCTAACCTCGCACAACATGCCGGGTCGGAGCATTGATCACA
TATCAAAGTAGCTTTAGCGATTATCGCCTTTCTACCTAAGACTTATCAAG
ATGTCGAATCTCATGCACAAGGTCAAAGATGCCTTGACTGGCCATCACGG
CAATTCCAATTCCCGTATGAATATCTTCTTTCTAAATTACCTAGGATTTA
CATCTAGCCTTCTTCTAACTTATTCCCGATTTAGGCAAAGGTCAGGGTAA
CAAGCCCAGTACCGACAACTATAATTCGGGCGGCGCGGAGCGATATGGGC
CTGGCGATGGTTCCTATAGCTCTCAGCCCAGCTCTGATAACTACAGTGCT
GGCGACTATGAGCGCAGGACGGACACATATGGTTCGGGCACTGGTGGTGA
ATATGGTGGCAGCTACGGATCTCAGACCAGTAGCTACGATTATGGCAATA
CTGGTGGCTATGGATCTGGCTCTGCGGATTATAGACATGAAACGGAGAGA
TACGGTGGCTCAGGGACTGGATATGAATCGCGGGCTATGGACAGTGGAGC
GATGCAGGACTTCGGCGGTGGTGCAGGAGACAGCAGCTACAACACCTACG
GCCAGGACACTGGATCTCATGAGTACAGTCCTACCAACAGGTTGGACTCT
GGCAAAATGGGTTACCATTCGATGGGCCCGGACAACGTGCGCTCTGGTGG
TCCGCAGCGGAACCAATGGTAGAGGTACTTGCAAGTATCATCAGTCTCAT
GCAAAGGTTGACTTATTTAATACACATGTATGATGGACATGCGGTAATTT
ATATGCGGAATAGTAATCGAATCTCCTCGAAGATACTGCGTAGTTTGAGA
ATTTGTTCGCGCACATGTCTACTTGAACTCTGGCTTCGATGCTGGTCGAA
CCCATTCTATGATGGTTGGGCAGTCATGGAGATCAGCTACATTACAGTGC
TTGCGGGGCCTTCAGCATGAAATGTGTTGTTGTCTTGACAGAAACACTGG
TGTATTGGCAGAGACACAGGCAGCGGCGTAACACAGCAAACCCAGCAAAC
TCGACAGTTCAAACGAGTGAACGATAGCACTTCCCGAAGTGGGCAGGTAC
GCTTCGCAACTTACAATGTGCAAGTGCGTCACTCCGTCTGCATCTCCATG
GCATGACCCCGACATCTCATTGTTTTAATCACTAGCTTCCTCGTTTCTTC
CGATCTCTCA
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Coding sequence (CDS) from alignment at ch4:1371522..1372931-

>KJC3_005019-T1 ID=KJC3_005019-T1|Name=KJC3_005019-T1|organism=Aspergillus niger KJC3|type=CDS|length=1104bp|location=Sequence derived from alignment at ch4:1371522..1372931- (Aspergillus niger KJC3)
GCAAAGGTCAGGGTAACAAGCCCAGTACCGACAACTATAATTCGGGCGGC
GCGGAGCGATATGGGCCTGGCGATGGTTCCTATAGCTCTCAGCCCAGCTC
TGATAACTACAGTGCTGGCGACTATGAGCGCAGGACGGACACATATGGTT
CGGGCACTGGTGGTGAATATGGTGGCAGCTACGGATCTCAGACCAGTAGC
TACGATTATGGCAATACTGGTGGCTATGGATCTGGCTCTGCGGATTATAG
ACATGAAACGGAGAGATACGGTGGCTCAGGGACTGGATATGAATCGCGGG
CTATGGACAGTGGAGCGATGCAGGACTTCGGCGGTGGTGCAGGAGACAGC
AGCTACAACACCTACGGCCAGGACACTGGATCTCATGAGTACAGTCCTAC
CAACAGGTTGGACTCTGGCAAAATGGGTTACCATTCGATGGGCCCGGACA
ACGTGCGCTCTGGTGGTCCGCAGCGGAACCAATGGTAGATGTCGAATCTC
ATGCACAAGGTCAAAGATGCCTTGACTGGCCATCACGGCAATTCCAATTC
CCGCAAAGGTCAGGGTAACAAGCCCAGTACCGACAACTATAATTCGGGCG
GCGCGGAGCGATATGGGCCTGGCGATGGTTCCTATAGCTCTCAGCCCAGC
TCTGATAACTACAGTGCTGGCGACTATGAGCGCAGGACGGACACATATGG
TTCGGGCACTGGTGGTGAATATGGTGGCAGCTACGGATCTCAGACCAGTA
GCTACGATTATGGCAATACTGGTGGCTATGGATCTGGCTCTGCGGATTAT
AGACATGAAACGGAGAGATACGGTGGCTCAGGGACTGGATATGAATCGCG
GGCTATGGACAGTGGAGCGATGCAGGACTTCGGCGGTGGTGCAGGAGACA
GCAGCTACAACACCTACGGCCAGGACACTGGATCTCATGAGTACAGTCCT
ACCAACAGGTTGGACTCTGGCAAAATGGGTTACCATTCGATGGGCCCGGA
CAACGTGCGCTCTGGTGGTCCGCAGCGGAACCAATGGTAGATGTCGAATC
TCATGCACAAGGTCAAAGATGCCTTGACTGGCCATCACGGCAATTCCAAT
TCCC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005019KJC3_005019Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005019-T1KJC3_005019-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005019-T1.cdsKJC3_005019-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005019-T1.utr3p3KJC3_005019-T1.utr3p3Aspergillus niger KJC3three_prime_UTR
KJC3_005019-T1.utr3p2KJC3_005019-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_005019-T1.utr3p1KJC3_005019-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005019-T1.exon4KJC3_005019-T1.exon4Aspergillus niger KJC3exon
KJC3_005019-T1.exon3KJC3_005019-T1.exon3Aspergillus niger KJC3exon
KJC3_005019-T1.exon2KJC3_005019-T1.exon2Aspergillus niger KJC3exon
KJC3_005019-T1.exon1KJC3_005019-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005019-T1.utr5p1KJC3_005019-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1371522..1372931 -
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