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KJC3_005035-T1, KJC3_005035-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005035-T1
Unique NameKJC3_005035-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1409695..1410511-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005035-T1 ID=KJC3_005035-T1|Name=KJC3_005035-T1|organism=Aspergillus niger KJC3|type=mRNA|length=817bp|location=Sequence derived from alignment at ch4:1409695..1410511- (Aspergillus niger KJC3)
CATCTCGATATACAACAACTCACCCGCGGCTTCTTACCAGCAACCTCGAA
TATACCCTCTATCACCCGCCCAAGATGACACCTGCTCCATTAACCAAAAC
ACTCGAATTCGAGAAAAAGAACCAGAACATGCCAAAACTCCCCAAACGTA
AGCTTTCCTTCCTCCGCCTCTCTTCAAGCGACAGCCCCCACTAACCCTGC
TACGCAATGTAGATGTGAAAGTCCAAAAGCGCCCGATCCCACATCCGTCC
ACTCCCTCGCCATACTCAGGCTCCTCGTCACCCAAAACCATCTACGTTTC
ATCCAGCTCCCCCACAATGGGCGTTGTCAAGCGCGTCCAGAAGTACCTTC
GGGCGGCGGAGAACCGCGCCACGGCAAAACTGCTCAGCGGAAATAACAAA
GGAAAGAAGGGCGATCGAAGGAATCAGTTCGCGCAGTTGGCGCAAAGTAA
CGAGGCGTTGAAGAAGGAGGAGGTGTTTGTGAAGGCCACGGGGCGGGCGA
TGGAGAGGGCATTGAAGGTGGGGAAGTGGTTTGAGGCGAGGGGAGAGGAG
TATACTGTGAGCGTGAAGACGGGGAGTGTCCTTGTGGTTGACGATGTGGT
GGAGGATGAAGAAGAGAGGGAGAAGGCGGTAGAGGAGAGCGAGAGGATGA
AAAAGGAGGTTGAGGAAGCAAAGCTGAAGGGTGAGTATGGGGAGTTAACC
AAGTCGGCGATGCGGAAGAGAAAGAGGGCTGTTGCGCGGTTGGAGGGCGA
ACAGGAGCTGCCGGAGACGAGGACGAGGTGGGTGAATATGGTGGAGGTGG
CAGTTTCATTGAAGTGA
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Coding sequence (CDS) from alignment at ch4:1409695..1410511-

>KJC3_005035-T1 ID=KJC3_005035-T1|Name=KJC3_005035-T1|organism=Aspergillus niger KJC3|type=CDS|length=1356bp|location=Sequence derived from alignment at ch4:1409695..1410511- (Aspergillus niger KJC3)
ATGTGAAAGTCCAAAAGCGCCCGATCCCACATCCGTCCACTCCCTCGCCA
TACTCAGGCTCCTCGTCACCCAAAACCATCTACGTTTCATCCAGCTCCCC
CACAATGGGCGTTGTCAAGCGCGTCCAGAAGTACCTTCGGGCGGCGGAGA
ACCGCGCCACGGCAAAACTGCTCAGCGGAAATAACAAAGGAAAGAAGGGC
GATCGAAGGAATCAGTTCGCGCAGTTGGCGCAAAGTAACGAGGCGTTGAA
GAAGGAGGAGGTGTTTGTGAAGGCCACGGGGCGGGCGATGGAGAGGGCAT
TGAAGGTGGGGAAGTGGTTTGAGGCGAGGGGAGAGGAGTATACTGTGAGC
GTGAAGACGGGGAGTGTCCTTGTGGTTGACGATGTGGTGGAGGATGAAGA
AGAGAGGGAGAAGGCGGTAGAGGAGAGCGAGAGGATGAAAAAGGAGGTTG
AGGAAGCAAAGCTGAAGGGTGAGTATGGGGAGTTAACCAAGTCGGCGATG
CGGAAGAGAAAGAGGGCTGTTGCGCGGTTGGAGGGCGAACAGGAGCTGCC
GGAGACGAGGACGAGGTGGGTGAATATGGTGGAGGTGGCAGTTTCATTGA
AGTGAATGACACCTGCTCCATTAACCAAAACACTCGAATTCGAGAAAAAG
AACCAGAACATGCCAAAACTCCCCAAACATGTGAAAGTCCAAAAGCGCCC
GATCCCACATCCGTCCACTCCCTCGCCATACTCAGGCTCCTCGTCACCCA
AAACCATCTACGTTTCATCCAGCTCCCCCACAATGGGCGTTGTCAAGCGC
GTCCAGAAGTACCTTCGGGCGGCGGAGAACCGCGCCACGGCAAAACTGCT
CAGCGGAAATAACAAAGGAAAGAAGGGCGATCGAAGGAATCAGTTCGCGC
AGTTGGCGCAAAGTAACGAGGCGTTGAAGAAGGAGGAGGTGTTTGTGAAG
GCCACGGGGCGGGCGATGGAGAGGGCATTGAAGGTGGGGAAGTGGTTTGA
GGCGAGGGGAGAGGAGTATACTGTGAGCGTGAAGACGGGGAGTGTCCTTG
TGGTTGACGATGTGGTGGAGGATGAAGAAGAGAGGGAGAAGGCGGTAGAG
GAGAGCGAGAGGATGAAAAAGGAGGTTGAGGAAGCAAAGCTGAAGGGTGA
GTATGGGGAGTTAACCAAGTCGGCGATGCGGAAGAGAAAGAGGGCTGTTG
CGCGGTTGGAGGGCGAACAGGAGCTGCCGGAGACGAGGACGAGGTGGGTG
AATATGGTGGAGGTGGCAGTTTCATTGAAGTGAATGACACCTGCTCCATT
AACCAAAACACTCGAATTCGAGAAAAAGAACCAGAACATGCCAAAACTCC
CCAAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004526ribonuclease P activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005035KJC3_005035Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005035-T1KJC3_005035-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005035-T1.cdsKJC3_005035-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005035-T1.exon2KJC3_005035-T1.exon2Aspergillus niger KJC3exon
KJC3_005035-T1.exon1KJC3_005035-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005035-T1.utr5p1KJC3_005035-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036882
DBxrefInterPro:IPR014612
DBxrefPFAM:PF12328
DBxrefPFAM:PF01918
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1409695..1410511 -
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