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KJC3_005036-T1, KJC3_005036-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005036-T1
Unique NameKJC3_005036-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1410657..1413063-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005036-T1 ID=KJC3_005036-T1|Name=KJC3_005036-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2407bp|location=Sequence derived from alignment at ch4:1410657..1413063- (Aspergillus niger KJC3)
CTATGTACTTGAAAAATTGGTTAATAGGCATTTCTATCGTCCAGAGGTTT
AGTAGTGTGCAGATTCCCCACCACTTCAACTCCTCCAAACCCAAACCAAG
TGAATCAAATCCCACAACAACAAAAGGCATGGCTGACATTAAGTGGAGAT
TTTCTCTTTTCCACGCCCCACTAACTAAATCAATTCTCCGTTGACCATCA
TGACGTGCCTACTATCCAGACCACTAGACTCCCTCCAGTAACCAAGTGGG
GTGACAAGTTCATACCCGGTGCCTTTAGCATCACTCACGCCCAAATCTGC
CCAATAACAACCCACCCTCAACAACCGCCAACACATCAAGCTTATAACGG
ATCTCCACCCAAACCACCAGATGAAACATGGCACCTGGAATGGACTGCAT
TGGGTTTCAAGCACCTCGAGCTTGATGTGTTGCCGTGTGATTGGCCCAGT
GGAAATCATCATGGGGTGGACAGCTCATAGGGTATGAATTGATGTCTTAC
TCACTGAGTGAATAATGCATACTGGAGGTAAGAAGGGGAGAGGTAGGTAT
ATCCTGCGTGTTCCCCCCAGTTGCGTCTCCAGGAAGTGCAGTGAATTCTC
CGTTACTTTGGTCCGGTCGTGTTAGCAACTATTGTGCTGCTGCTTGACCC
CCACCCCCTCTTGTTCGACATTCTGGAGGTCATCTTTGACTACTATTGCT
CGGCTGAAGAAGAAGATTTGAGTGTTAGTGTTAGTATTAGTTGGGATAAG
TCTACAACTACGAGTACGGCTTCATCTACAGCTACAGACATGGTCGCCGG
CGGCAACACCAGCAACATGTCGGCTAGATATACTCCCAATGTTAAGCCCG
AGTTTGACGATGATCTCGAGGAGTATGAGCAGCCAGAGCTATCGTGAGTA
TCTTCCCTTCCTTTTCACCACCTCCCAGAACCACTTACTAACCATGTATA
CTTGGCATGAAACAGCCCCTACGAAACCCGCCTCGTAATCGTCCTCCTCG
GCCCCAGCGAGCGCAAATTCTCCATTCCAGAATACTACCTCAAGCAGTCG
CCCATCTTCGCCGACATCCTAAGCACCTACCCGAACTTCATCACCCGGAC
GACCCCCTGCATCGCTCTCCCAGACATTGACGACGACATCACCCACACGA
TCGTCCACTACCTGCACACCGGCACGTACCAGACCCTCCGGCATGGCGGC
GACTGGACAAAGACCGAGTACCGACGCAGCGTGCTCGCCTACGCCGCCGC
ATCCAAGTACGAGCTCAGCGGACTACTGACCCTCTCCAAGAAATACATGC
AGAAGCTAGACAAAGACTTATCCATCTTCGACGTCCTCAGCGTGGCCAGA
AAAGCCATCACCAAAATCCCGGACTGGGATCAGTGGTTTTTCAGCGTGTA
TGTACGGAGCCGTCTCGCTGCGGCGTTCGATGAAGATGAGGATTTGTTCG
AGAGTCCGCGCTTCCAGTACCTTCTTGGAGCGGAGCCGGGGTTCGTGACG
TGCTTGGTCCAGGCCATGGTAGCTATTTACGAGGCGAAGCTGTCTGAGCT
GAAGCAGTATCCTAAGATAAACGGATACCACCATCATGACAGAGACGAAG
ACAACAGGGAAGAGCAAGAACATGATAACACTAATGGTGGTGGATACATG
GAACCTATACCCACCAGCCCCGGACGAAACTACAACAAAGCGGTAATCTT
CATCGAGGAGACCATGTCGGACAGACAACCCTCCGAGGGCGCCCCCTCGG
AGGCAGGATATCCGGACTCAATCCAAGAAGAGAACCTCACCACCACAAGA
GAACACATGGAAGCGTTCCCCGAACTAACAGATGACGTGTACGTCCCTGA
AGCGCAGCAACAGGAGGAGCGATACGCCCCGACCGAAGAGACGATCGTTG
AGGAGCCAGGACCGGAGACCGAGACGAAGACACACGGACTAGATAAAGAC
ATAGTGACTGAGCGGTGGGGTGCATGGCGCAACTGGGCAACCAAAGATAG
GGACTGGTACAGGAACGACATGCATGATGGAGCGACGACGGTGGTGCCTG
AGAAGCCTGCTGTTCCTGAGCCGCCGCCGCCCGAAGACCCTGTTCCGGAG
TACCCCGAGATGCAGCGCTCCGTGACGGAGGAGACTGCAACTGAGAGTGT
TCCGGCGGAGAATGTCAATGTTAATGGGAAGAAGCTGGGGAAGAAGAGCC
GTAAGAAGAAGATGCGGGCGCTGTTTTCCTCTGCGGAGGAGCCGAAAGCT
GAGCTACAGGCTGCGTATTGATTGGTCGTGGGGGTTGGCGGATGGGATTA
TGGTAAGACTGTACAAAAGCTACGGCGTTTGGGATTTGGTTTAGTAGAAA
GTCAACATTGACGATACTGTCTTAATGTGAATACGAGAATAAATAAATGA
TTGGAAT
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Coding sequence (CDS) from alignment at ch4:1410657..1413063-

>KJC3_005036-T1 ID=KJC3_005036-T1|Name=KJC3_005036-T1|organism=Aspergillus niger KJC3|type=CDS|length=2820bp|location=Sequence derived from alignment at ch4:1410657..1413063- (Aspergillus niger KJC3)
CCCCTACGAAACCCGCCTCGTAATCGTCCTCCTCGGCCCCAGCGAGCGCA
AATTCTCCATTCCAGAATACTACCTCAAGCAGTCGCCCATCTTCGCCGAC
ATCCTAAGCACCTACCCGAACTTCATCACCCGGACGACCCCCTGCATCGC
TCTCCCAGACATTGACGACGACATCACCCACACGATCGTCCACTACCTGC
ACACCGGCACGTACCAGACCCTCCGGCATGGCGGCGACTGGACAAAGACC
GAGTACCGACGCAGCGTGCTCGCCTACGCCGCCGCATCCAAGTACGAGCT
CAGCGGACTACTGACCCTCTCCAAGAAATACATGCAGAAGCTAGACAAAG
ACTTATCCATCTTCGACGTCCTCAGCGTGGCCAGAAAAGCCATCACCAAA
ATCCCGGACTGGGATCAGTGGTTTTTCAGCGTGTATGTACGGAGCCGTCT
CGCTGCGGCGTTCGATGAAGATGAGGATTTGTTCGAGAGTCCGCGCTTCC
AGTACCTTCTTGGAGCGGAGCCGGGGTTCGTGACGTGCTTGGTCCAGGCC
ATGGTAGCTATTTACGAGGCGAAGCTGTCTGAGCTGAAGCAGTATCCTAA
GATAAACGGATACCACCATCATGACAGAGACGAAGACAACAGGGAAGAGC
AAGAACATGATAACACTAATGGTGGTGGATACATGGAACCTATACCCACC
AGCCCCGGACGAAACTACAACAAAGCGGTAATCTTCATCGAGGAGACCAT
GTCGGACAGACAACCCTCCGAGGGCGCCCCCTCGGAGGCAGGATATCCGG
ACTCAATCCAAGAAGAGAACCTCACCACCACAAGAGAACACATGGAAGCG
TTCCCCGAACTAACAGATGACGTGTACGTCCCTGAAGCGCAGCAACAGGA
GGAGCGATACGCCCCGACCGAAGAGACGATCGTTGAGGAGCCAGGACCGG
AGACCGAGACGAAGACACACGGACTAGATAAAGACATAGTGACTGAGCGG
TGGGGTGCATGGCGCAACTGGGCAACCAAAGATAGGGACTGGTACAGGAA
CGACATGCATGATGGAGCGACGACGGTGGTGCCTGAGAAGCCTGCTGTTC
CTGAGCCGCCGCCGCCCGAAGACCCTGTTCCGGAGTACCCCGAGATGCAG
CGCTCCGTGACGGAGGAGACTGCAACTGAGAGTGTTCCGGCGGAGAATGT
CAATGTTAATGGGAAGAAGCTGGGGAAGAAGAGCCGTAAGAAGAAGATGC
GGGCGCTGTTTTCCTCTGCGGAGGAGCCGAAAGCTGAGCTACAGGCTGCG
TATTGAATGGTCGCCGGCGGCAACACCAGCAACATGTCGGCTAGATATAC
TCCCAATGTTAAGCCCGAGTTTGACGATGATCTCGAGGAGTATGAGCAGC
CAGAGCTATCCCCCTACGAAACCCGCCTCGTAATCGTCCTCCTCGGCCCC
AGCGAGCGCAAATTCTCCATTCCAGAATACTACCTCAAGCAGTCGCCCAT
CTTCGCCGACATCCTAAGCACCTACCCGAACTTCATCACCCGGACGACCC
CCTGCATCGCTCTCCCAGACATTGACGACGACATCACCCACACGATCGTC
CACTACCTGCACACCGGCACGTACCAGACCCTCCGGCATGGCGGCGACTG
GACAAAGACCGAGTACCGACGCAGCGTGCTCGCCTACGCCGCCGCATCCA
AGTACGAGCTCAGCGGACTACTGACCCTCTCCAAGAAATACATGCAGAAG
CTAGACAAAGACTTATCCATCTTCGACGTCCTCAGCGTGGCCAGAAAAGC
CATCACCAAAATCCCGGACTGGGATCAGTGGTTTTTCAGCGTGTATGTAC
GGAGCCGTCTCGCTGCGGCGTTCGATGAAGATGAGGATTTGTTCGAGAGT
CCGCGCTTCCAGTACCTTCTTGGAGCGGAGCCGGGGTTCGTGACGTGCTT
GGTCCAGGCCATGGTAGCTATTTACGAGGCGAAGCTGTCTGAGCTGAAGC
AGTATCCTAAGATAAACGGATACCACCATCATGACAGAGACGAAGACAAC
AGGGAAGAGCAAGAACATGATAACACTAATGGTGGTGGATACATGGAACC
TATACCCACCAGCCCCGGACGAAACTACAACAAAGCGGTAATCTTCATCG
AGGAGACCATGTCGGACAGACAACCCTCCGAGGGCGCCCCCTCGGAGGCA
GGATATCCGGACTCAATCCAAGAAGAGAACCTCACCACCACAAGAGAACA
CATGGAAGCGTTCCCCGAACTAACAGATGACGTGTACGTCCCTGAAGCGC
AGCAACAGGAGGAGCGATACGCCCCGACCGAAGAGACGATCGTTGAGGAG
CCAGGACCGGAGACCGAGACGAAGACACACGGACTAGATAAAGACATAGT
GACTGAGCGGTGGGGTGCATGGCGCAACTGGGCAACCAAAGATAGGGACT
GGTACAGGAACGACATGCATGATGGAGCGACGACGGTGGTGCCTGAGAAG
CCTGCTGTTCCTGAGCCGCCGCCGCCCGAAGACCCTGTTCCGGAGTACCC
CGAGATGCAGCGCTCCGTGACGGAGGAGACTGCAACTGAGAGTGTTCCGG
CGGAGAATGTCAATGTTAATGGGAAGAAGCTGGGGAAGAAGAGCCGTAAG
AAGAAGATGCGGGCGCTGTTTTCCTCTGCGGAGGAGCCGAAAGCTGAGCT
ACAGGCTGCGTATTGAATGGTCGCCGGCGGCAACACCAGCAACATGTCGG
CTAGATATACTCCCAATGTTAAGCCCGAGTTTGACGATGATCTCGAGGAG
TATGAGCAGCCAGAGCTATC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005036KJC3_005036Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005036-T1KJC3_005036-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005036-T1.cdsKJC3_005036-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005036-T1.utr3p1KJC3_005036-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005036-T1.exon3KJC3_005036-T1.exon3Aspergillus niger KJC3exon
KJC3_005036-T1.exon2KJC3_005036-T1.exon2Aspergillus niger KJC3exon
KJC3_005036-T1.exon1KJC3_005036-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005036-T1.utr5p2KJC3_005036-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005036-T1.utr5p1KJC3_005036-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1410657..1413063 -
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