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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1417351..1418433- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005039-T1 ID=KJC3_005039-T1|Name=KJC3_005039-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1083bp|location=Sequence derived from alignment at ch4:1417351..1418433- (Aspergillus niger KJC3)
ATCGACTCGGCCCGCCATGAAGCCCTCGCTCAAGCCCGCTCACCCATATC
CGGGCGATTGACGAGTAGGATTGTATTAACGCCCAATCTCTCGATAAGAG
CTTGTCGCTCGGCGTGTTGACTCGGCCCAAAAAGAAGTCCCTACATAAGG
CAGACCACCAACCCTGGCCCAGAATACGCAGACAACCGACAGCGGCTGAA
TCCATTATCTCACCCTCCAATTCAAGTCTTGCATTACCGGTAGACGATGT
CACTTCATCCACTTGACCCCGCTACTGCGGTCGAGATCGAAAAGGCTACC
ACCTTGGTCAAAGACGCTTATCCTGGGATTCCCCTGCATTTCAAGGCCGG
TGGTCTACAGGAACCACCCAAGGAGGCTTTGCTCAATTTCCTCGACGCTG
AACACAACAACAGACCCCTACCTTTTCTCCCAAGATGTATATTTCTCAAT
TGGTACATCAAAAGGACGCCTAGGTTCTTCGAAGCCGTGGTAAATGTATC
CAATGGCACCTTTGTCCACCACGCTGAGCTTCCTCGAGACTTTCATGGCC
CGGGCGACCGAGCGGAGATGAACGAAGTGGCCCAGGCTGTCATGGCTGAT
CCTGCAGTACAAGCAGAGATTAAGCGCCTACAGATTGATGACACCACGGT
CGTTCTTGACCCGTGGGACTATGGTGTGGATGGCGAGGACACACAAACGA
GGCACGCTCAAGTGTTCATGTACATGAGAAACCCTGCAAACAACGACCCA
GACTCCAATCACTATAGCTTTCCGCTAGACTTTATGGTCACTGTTGACTT
GTGCGCCATGAAGGTGAAAAAGATCATCCGGCTTCCTCTTGGGGCCGATG
AGAGTGTGACGCACGGCTCTAATGTACTTCATCGTCGTACAGCTCCAGAG
GAGCCTGAATATGACCATCGTCTGCAGAAGATTCCTCCGCGGATGACATT
GAAACCGTACCAGGTGAATCAGCCCGAGGGTGCCTCCTTCACTGTCAAAG
GTCACCTTGTCGAGTGGGAGAAATGGCGATTCCGAGTTGGGTTCAACTGG
CGTGAAGGTCCTAGCTTACTGCCCCTTGACTGA back to topCoding sequence (CDS) from alignment at ch4:1417351..1418433- >KJC3_005039-T1 ID=KJC3_005039-T1|Name=KJC3_005039-T1|organism=Aspergillus niger KJC3|type=CDS|length=837bp|location=Sequence derived from alignment at ch4:1417351..1418433- (Aspergillus niger KJC3)
ATGTCACTTCATCCACTTGACCCCGCTACTGCGGTCGAGATCGAAAAGGC
TACCACCTTGGTCAAAGACGCTTATCCTGGGATTCCCCTGCATTTCAAGG
CCGGTGGTCTACAGGAACCACCCAAGGAGGCTTTGCTCAATTTCCTCGAC
GCTGAACACAACAACAGACCCCTACCTTTTCTCCCAAGATGTATATTTCT
CAATTGGTACATCAAAAGGACGCCTAGGTTCTTCGAAGCCGTGGTAAATG
TATCCAATGGCACCTTTGTCCACCACGCTGAGCTTCCTCGAGACTTTCAT
GGCCCGGGCGACCGAGCGGAGATGAACGAAGTGGCCCAGGCTGTCATGGC
TGATCCTGCAGTACAAGCAGAGATTAAGCGCCTACAGATTGATGACACCA
CGGTCGTTCTTGACCCGTGGGACTATGGTGTGGATGGCGAGGACACACAA
ACGAGGCACGCTCAAGTGTTCATGTACATGAGAAACCCTGCAAACAACGA
CCCAGACTCCAATCACTATAGCTTTCCGCTAGACTTTATGGTCACTGTTG
ACTTGTGCGCCATGAAGGTGAAAAAGATCATCCGGCTTCCTCTTGGGGCC
GATGAGAGTGTGACGCACGGCTCTAATGTACTTCATCGTCGTACAGCTCC
AGAGGAGCCTGAATATGACCATCGTCTGCAGAAGATTCCTCCGCGGATGA
CATTGAAACCGTACCAGGTGAATCAGCCCGAGGGTGCCTCCTTCACTGTC
AAAGGTCACCTTGTCGAGTGGGAGAAATGGCGATTCCGAGTTGGGTTCAA
CTGGCGTGAAGGTCCTAGCTTACTGCCCCTTGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005507 | copper ion binding |
| GO:0008131 | primary amine oxidase activity |
| GO:0048038 | quinone binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0009308 | amine metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005039-T1.utr5p1 | KJC3_005039-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016182 |
| DBxref | InterPro:IPR036460 |
| DBxref | InterPro:IPR015800 |
| DBxref | InterPro:IPR015802 |
| DBxref | InterPro:IPR015798 |
| DBxref | PFAM:PF02728 |
| DBxref | PFAM:PF02727 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1417351..1418433 - |
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