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KJC3_005050-T1, KJC3_005050-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005050-T1
Unique NameKJC3_005050-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1451966..1453560-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005050-T1 ID=KJC3_005050-T1|Name=KJC3_005050-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1595bp|location=Sequence derived from alignment at ch4:1451966..1453560- (Aspergillus niger KJC3)
GCTCATTGTTGAAAGGTCACCCTCATCATTATATCACTACTATGGCTCCC
CTGGTACTTTATTTCCCCCCCTCCCTCTCGCGTCCCTCCACCGGCTTCTC
CGGATATCCACTCCCTCGCAGACCCTTTCGATCCCTCTTCGTCTGTTCTT
GTTCTTCTTCCCCATCTATACGGCCTTGTATCTCTCCCCCGAATGATAGA
TAGATACCTGTCGCAACCAATAAACTAGCTTGTGCTGGGGACAATCTCGA
TTATCAACCTACTAGCAGACTCAGAAATTACAATCAATTACCATCACAAT
GGCTCTCAGCAGTGAGTATATTCCCTGCAGGACGGATTTTTGCTGCGTCG
CACAACGACTAAACTGACATTAACTGTGCTCTAGGAGTTGCAATGGGCTT
CCTAGGCCTGTTCTTCACGGCCGGTGCTCTTCTGTTGATGTTCCTGACTT
TGTTGGGCGGAGCGAGAAACTCGCGGCCCTTGAACGAAATCTTCTTCCTG
CAGGTCGACACAAGCAATATCCCAGGTGCCCCATCCCTATCTCGCTGGAC
GTTCTGGGAGATATGTGCAGTGACGGCGAATGGAAAGAATCTTTGCGGAT
CGTCGTACCCAGACTTCCCATTTGATCCTCCGAGCCACCGCAACTTTGAC
ACCACTCAGAACATTCCCTCTGCTTTCATTGGGTAAGCAAGAACTCAATC
GCCGGCTCACCTATACTATGATCGCGATCTAACATGCCACAGCACGAACC
ACTACTTCCTGACATCTCGGTTCTCGTTCCCCTTCCTCATCATCGCGCTA
TTCTTTGGCGTGGTGTCGCTGTTCACTGGGTTCCTGGCCATGTGCACGCG
CATTGGCAGCTACATATCTTCGCTCATGGCTTGGATCGCCTTGGTTTTCC
AGATTATCACGACTTGCCTCATCACGTAAGTTTTAACAGAAGAATTAAAC
ACAAAGCTTTACTGACAACCATCAGGGCTGTTTACGTCCAGGGCCGCAAC
AAGTTTAACGCCAATGGCCAGAGCGCCAGCGTGGGTGTTAAGGCTTTCGC
TTTCATGTGGACTGCTGTGGCTTGCTTGATGCTTGCATGCATGTTCTATT
GCATGGGTGGTGCTGTCGGACGCAAAGAAAGAGGATACAGTGGCCGTGAG
CACCGTCGGCGCGGTTTCTTCTCGTCCGCACGCTCAAACAGTGTAAGAAG
CAACAAGGAGACCGCGCCATAAATTCGATATGGTCTTGTTTCTTGGATGT
TACCCAAGCGGAAATGAAAGAACTGGGCTATAGTATTGTGTCGATACCTA
CTACAGTACAACGACCTCTGTAACAACTGTCTAGGTATCGGCTGCAAGCC
TATTTCGTCCCCTCAACACAGGAGGGAGCGTCTACCGGAGTATGGATCTG
ACTGTTTTGATGACTTTACGCTTTGCGGGCTGAGGAGCCACACGCCGTCC
TGAGTGAACGAGTGGGCTCATCCACGCATGCTTACATTAATGTCTCTTTG
ATGAATCTCTGTTTACTCGGCCAATCTCATGTATTATACTGTCTTTGCTA
CTTTATATCTATCTGCCCCTAATTGTAATACAATTTATTTGAAAA
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Coding sequence (CDS) from alignment at ch4:1451966..1453560-

>KJC3_005050-T1 ID=KJC3_005050-T1|Name=KJC3_005050-T1|organism=Aspergillus niger KJC3|type=CDS|length=2964bp|location=Sequence derived from alignment at ch4:1451966..1453560- (Aspergillus niger KJC3)
GGCTGTTTACGTCCAGGGCCGCAACAAGTTTAACGCCAATGGCCAGAGCG
CCAGCGTGGGTGTTAAGGCTTTCGCTTTCATGTGGACTGCTGTGGCTTGC
TTGATGCTTGCATGCATGTTCTATTGCATGGGTGGTGCTGTCGGACGCAA
AGAAAGAGGATACAGTGGCCGTGAGCACCGTCGGCGCGGTTTCTTCTCGT
CCGCACGCTCAAACAGTGTAAGAAGCAACAAGGAGACCGCGCCATAACAC
GAACCACTACTTCCTGACATCTCGGTTCTCGTTCCCCTTCCTCATCATCG
CGCTATTCTTTGGCGTGGTGTCGCTGTTCACTGGGTTCCTGGCCATGTGC
ACGCGCATTGGCAGCTACATATCTTCGCTCATGGCTTGGATCGCCTTGGT
TTTCCAGATTATCACGACTTGCCTCATCACGAGTTGCAATGGGCTTCCTA
GGCCTGTTCTTCACGGCCGGTGCTCTTCTGTTGATGTTCCTGACTTTGTT
GGGCGGAGCGAGAAACTCGCGGCCCTTGAACGAAATCTTCTTCCTGCAGG
TCGACACAAGCAATATCCCAGGTGCCCCATCCCTATCTCGCTGGACGTTC
TGGGAGATATGTGCAGTGACGGCGAATGGAAAGAATCTTTGCGGATCGTC
GTACCCAGACTTCCCATTTGATCCTCCGAGCCACCGCAACTTTGACACCA
CTCAGAACATTCCCTCTGCTTTCATTGGATGGCTCTCAGCAGGCTGTTTA
CGTCCAGGGCCGCAACAAGTTTAACGCCAATGGCCAGAGCGCCAGCGTGG
GTGTTAAGGCTTTCGCTTTCATGTGGACTGCTGTGGCTTGCTTGATGCTT
GCATGCATGTTCTATTGCATGGGTGGTGCTGTCGGACGCAAAGAAAGAGG
ATACAGTGGCCGTGAGCACCGTCGGCGCGGTTTCTTCTCGTCCGCACGCT
CAAACAGTGTAAGAAGCAACAAGGAGACCGCGCCATAACACGAACCACTA
CTTCCTGACATCTCGGTTCTCGTTCCCCTTCCTCATCATCGCGCTATTCT
TTGGCGTGGTGTCGCTGTTCACTGGGTTCCTGGCCATGTGCACGCGCATT
GGCAGCTACATATCTTCGCTCATGGCTTGGATCGCCTTGGTTTTCCAGAT
TATCACGACTTGCCTCATCACGAGTTGCAATGGGCTTCCTAGGCCTGTTC
TTCACGGCCGGTGCTCTTCTGTTGATGTTCCTGACTTTGTTGGGCGGAGC
GAGAAACTCGCGGCCCTTGAACGAAATCTTCTTCCTGCAGGTCGACACAA
GCAATATCCCAGGTGCCCCATCCCTATCTCGCTGGACGTTCTGGGAGATA
TGTGCAGTGACGGCGAATGGAAAGAATCTTTGCGGATCGTCGTACCCAGA
CTTCCCATTTGATCCTCCGAGCCACCGCAACTTTGACACCACTCAGAACA
TTCCCTCTGCTTTCATTGGATGGCTCTCAGCAGGCTGTTTACGTCCAGGG
CCGCAACAAGTTTAACGCCAATGGCCAGAGCGCCAGCGTGGGTGTTAAGG
CTTTCGCTTTCATGTGGACTGCTGTGGCTTGCTTGATGCTTGCATGCATG
TTCTATTGCATGGGTGGTGCTGTCGGACGCAAAGAAAGAGGATACAGTGG
CCGTGAGCACCGTCGGCGCGGTTTCTTCTCGTCCGCACGCTCAAACAGTG
TAAGAAGCAACAAGGAGACCGCGCCATAACACGAACCACTACTTCCTGAC
ATCTCGGTTCTCGTTCCCCTTCCTCATCATCGCGCTATTCTTTGGCGTGG
TGTCGCTGTTCACTGGGTTCCTGGCCATGTGCACGCGCATTGGCAGCTAC
ATATCTTCGCTCATGGCTTGGATCGCCTTGGTTTTCCAGATTATCACGAC
TTGCCTCATCACGAGTTGCAATGGGCTTCCTAGGCCTGTTCTTCACGGCC
GGTGCTCTTCTGTTGATGTTCCTGACTTTGTTGGGCGGAGCGAGAAACTC
GCGGCCCTTGAACGAAATCTTCTTCCTGCAGGTCGACACAAGCAATATCC
CAGGTGCCCCATCCCTATCTCGCTGGACGTTCTGGGAGATATGTGCAGTG
ACGGCGAATGGAAAGAATCTTTGCGGATCGTCGTACCCAGACTTCCCATT
TGATCCTCCGAGCCACCGCAACTTTGACACCACTCAGAACATTCCCTCTG
CTTTCATTGGATGGCTCTCAGCAGGCTGTTTACGTCCAGGGCCGCAACAA
GTTTAACGCCAATGGCCAGAGCGCCAGCGTGGGTGTTAAGGCTTTCGCTT
TCATGTGGACTGCTGTGGCTTGCTTGATGCTTGCATGCATGTTCTATTGC
ATGGGTGGTGCTGTCGGACGCAAAGAAAGAGGATACAGTGGCCGTGAGCA
CCGTCGGCGCGGTTTCTTCTCGTCCGCACGCTCAAACAGTGTAAGAAGCA
ACAAGGAGACCGCGCCATAACACGAACCACTACTTCCTGACATCTCGGTT
CTCGTTCCCCTTCCTCATCATCGCGCTATTCTTTGGCGTGGTGTCGCTGT
TCACTGGGTTCCTGGCCATGTGCACGCGCATTGGCAGCTACATATCTTCG
CTCATGGCTTGGATCGCCTTGGTTTTCCAGATTATCACGACTTGCCTCAT
CACGAGTTGCAATGGGCTTCCTAGGCCTGTTCTTCACGGCCGGTGCTCTT
CTGTTGATGTTCCTGACTTTGTTGGGCGGAGCGAGAAACTCGCGGCCCTT
GAACGAAATCTTCTTCCTGCAGGTCGACACAAGCAATATCCCAGGTGCCC
CATCCCTATCTCGCTGGACGTTCTGGGAGATATGTGCAGTGACGGCGAAT
GGAAAGAATCTTTGCGGATCGTCGTACCCAGACTTCCCATTTGATCCTCC
GAGCCACCGCAACTTTGACACCACTCAGAACATTCCCTCTGCTTTCATTG
GATGGCTCTCAGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005050KJC3_005050Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005050-T1KJC3_005050-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005050-T1.cdsKJC3_005050-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005050-T1.utr3p1KJC3_005050-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005050-T1.exon4KJC3_005050-T1.exon4Aspergillus niger KJC3exon
KJC3_005050-T1.exon3KJC3_005050-T1.exon3Aspergillus niger KJC3exon
KJC3_005050-T1.exon2KJC3_005050-T1.exon2Aspergillus niger KJC3exon
KJC3_005050-T1.exon1KJC3_005050-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005050-T1.utr5p1KJC3_005050-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009571
DBxrefPFAM:PF06687
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1451966..1453560 -
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