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KJC3_005058-T1, KJC3_005058-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005058-T1
Unique NameKJC3_005058-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1464855..1465886+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005058-T1 ID=KJC3_005058-T1|Name=KJC3_005058-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1032bp|location=Sequence derived from alignment at ch4:1464855..1465886+ (Aspergillus niger KJC3)
TCTTTACCTCCGCCCTCCTCTGTCTATTATATACTCCGGCCTGTCTGCCA
CCTATTCACCATGGCAGACAAGAAGACTTCCTCGTAAGTACTCCATGTCC
AGTACCCTCGAAAAACACACTTCTCCGTACACCTTCGCTATAGCCCACCC
CTCCCCTCTCAACCCAAATATCCCCAAATCACAACCCCCCTCCAACTACA
ACACCCACAAACCCCCCCTCAACAACCACAACCCAGACCACGACTAACTC
TTTCCCCCCGGGAAATCCAGAGTAACACCCCCCACCAACCCGCGCGGCAT
TCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGCGCA
GCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAGTAC
CAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGACAA
GATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAACTCA
GAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTGAAC
GATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGAAGT
GTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGGAGG
CTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTCGGG
AACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGGTATGTCC
TTCTCTCTGGTTTCTTTTTCTTTGGTTTCTGGGGCTAATGGTATTTGTAG
ACGCTTGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAG
ACGGAAAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCG
CTTGATATCATTTTAGAGAGATATGATACTTTTAATGTACTGTTTTTGTT
GTTTCTGGTTCTGTCTCCGACTACCCTTTTGTATGTATTTAGTGTCAAAA
GCAGGCATGGATATAAAAGTCTACATGAAAAC
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Coding sequence (CDS) from alignment at ch4:1464855..1465886+

>KJC3_005058-T1 ID=KJC3_005058-T1|Name=KJC3_005058-T1|organism=Aspergillus niger KJC3|type=CDS|length=1800bp|location=Sequence derived from alignment at ch4:1464855..1465886+ (Aspergillus niger KJC3)
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRF1KJC3_005058Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005058-T1KJC3_005058-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005058-T1.utr5p1KJC3_005058-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005058-T1.exon1KJC3_005058-T1.exon1Aspergillus niger KJC3exon
KJC3_005058-T1.exon2KJC3_005058-T1.exon2Aspergillus niger KJC3exon
KJC3_005058-T1.exon3KJC3_005058-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005058-T1.cdsKJC3_005058-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005058-T1.utr3p1KJC3_005058-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264UVA
DBxrefInterPro:IPR009053
DBxrefInterPro:IPR004127
DBxrefInterPro:IPR016655
DBxrefPFAM:PF02996
Productpeptide chain release factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1464855..1465886 +
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