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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1484525..1487408+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005064-T1 ID=KJC3_005064-T1|Name=KJC3_005064-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2884bp|location=Sequence derived from alignment at ch4:1484525..1487408+ (Aspergillus niger KJC3)
CTTCTGCCTTTCCGATATCCTTTCCCTCCACTACTACGGGCTCATACTAC
TACTTACTCTTCCTAGTAAAGTCGGTAATCAATGCCTCTCTTTCTCCATA
GAGCCTGGAGTAAAACTAACTAGTAGACTTCCTACTCGTCCACTCACACA
CTCTCTCTCCCTCTCTCATCCAATTAATATATACTCTTATCCTTACCCTC
TCTTCCCTCTCTTCTCCTTCTCCTTCTTTCCTTCCTTTCCTTTTACTTTC
CCCCACACCGTCTTTGTTCTGCAAGCTGGTCTTTGCAGCTTCACTGACTA
CTACAACTACTACTATTATAATTACTACCATCACTATTACTACTACCCCA
ACGTTGTTTGTCGTTGTGGGTGGTTCAATCCAACCTTCCCTTCCACTTAC
TACCGTCTGGATCTGGATCTGCACCAGCCATACCCGGTTTCCCATTCCCC
CCTCCCTTCTTCAACTTGCTGGTGGTTATTCTGCGTCATTGCCACGAAAC
CATTACCACCATCGTCACCTTGATTCTGATCAGTGAAAGCATGTATTGCA
ATAATGCTCTAATATGGTTGCTGGCATCTGTTAGACCATAACTTCCACGG
ATATGGATTTCATTGTAAGTGTGGCATTCTTTTCCTGTCTTCATCCCCCC
CCATTGTCCTCGGTGTGTGTCTGTCTTTCGCATCGGTGAATGATGATGGC
GATGTGTGAGCATGACGTGCACCTTCATGTCTCACCGGGGACATGCGTTT
GGGCTTCTTTGCGCTGGATTAGGCCTTTTCTTCCTTCCTCGCACCGCGCA
ATGCGCGCATAATGACCGCGTGCGACATGGCAGGGATCCTGACTCTTGCG
CTTGTCCTTTTCCCACCCCGTCTCTAGACAGTGGATCCCTGTCTGCTTGC
TCCAGCTAACACTTTCTCCCTCTACTAGCTTTCTTTGACGCATTTCTGCG
AGGTGCATGGTCCTACCTCGATCATCTGCTCGCAGGTCCTACCGTTCCCT
TGTTCACAATGCTATCCCGACAAATCTGATTCCTCTCCCGACGAAACCCC
TGCCACCTCTCACGACACCGTTTCATCCCACGGCCTGCAGAGCCGCGCGA
ATACTAAATCTACCCCAAATAAACTCTCGGAAAAGAACATCGACTCCTCC
GACAGGTCTCCCAGGATAGAAGACCATCCCTATTTCCTCAAAGGCCAGGC
CACGCCGGCTGACACTCAACAACGACCCAACTTCCTCGGCGGCGCAGACG
GCGACACGTGCGCCAGTTGCAGCTTGACTCTCCCTGAAGATGTGAGCAAG
CAGCTGCCCCCAGGTGCGCCAGGAACGGCCCGAAGTGACGGCAAAGGGAG
GAACGGCAGTCCGGTTTTGCGATCGAGAGAGGTCGTCTACTCTTGTGGGA
CCAGTCACGCCGACCACGATGATACCACACACGACCCGCATGCTCATGCT
TCATACCCCGACTCCCTTCATTCGGCCTCTGTTACATCGGACGCCTCCTG
TCATACACACATCCTCACCTATCTTTCATTGCGCGGACCTCCCAATCCGG
CTGATTACGCGCTTCTGCGACGTTCCTCCATTCGAACCCTGAGTTGCGAA
CTTTTGCCACGCGGTCTTTCCTCGGGCCCTCTATGTTTTGGCGATTCTAC
CGCTGGCTATACGATAGCTTACATCTTTCGCCTGCCCGACCCCATGGCTC
GCGGGAAACGGCGTAGCTATGCCCTTGTCGCATTGGCAGGAAAAGATGCC
GGACGAGCCTTCCGTGCCTGTCCTGTGATTTGGCGCGCATTTGGTCGGAT
TGCCACGGGCATTGTCAACTCAGCGGAGAAATACCAGGAAGAAGAAAAGC
GTCGCGATGAACAAAACAACGCATCGAATAGACGCGGGAGCAAGCAGTAT
ACACCTGTTTCCTCTTTCCTCACAGGGCGCGCCCTTGACCCAGATGGACA
GCTTCGCAGACCCGGTCAAGTGCGAGCGAGAAACCTTTCGGAAATCGTGG
GAAACCAATACATCTTTGCTGAAATACATGCACACTTTGTTGCGCTCCTG
CAGCAGCTGGGTACGATGTTTGGAGCCTCACCTATTTCAGAAGAACGATT
CGTGTGCAGCACAGTGCGCGAAGAAGACGCCACTGCTTCACGGAAATCAT
CATTAGTTCCTGGTGGCAAGGAGAAGCCGCAGGATAAGCTTTCGCGACAA
TACGAGGACAGCGATCTGGGAATGTCCACTTTGGACATCTCCTCGGGGCC
TAAGCCGATCCCCATCGCACCTCGCCGACCAGTGATCGCTTAGCTTGTGC
CACATTTGCGCTACGGCATATCTTAATTGGCTATATTATCACCTTCGGGC
CAATTACATTACTTGTTCAATCTCTTGAAAGCGGAGCATTTCAACCGTTA
TCCGCGATTCGACTAGCATCACTGCATGCAGTCAGCAGTCTCATGTGACA
ATTCCCATCCTCACATGATTGACATCATTTCGGCGTTTACTTCCGGTACA
TGGACAGGACTTGACATAGACTACGGCATGTTTTTTTATTTCCAGAAGGA
GGCGGAGTTTCGGCACATTTACAGGACGCATGGCTTTTGATTTGTATTCC
CTTTCTATTCCCCCAAAGCGTGGGTAGATGAGCGATCTGAGTTTTGTTCT
ATTCCACCTCACCCTTTCGATTCTTCCCGATCCGATTCGGACTGTTTTAT
TACGACTTCTACATTCTATTAATCACCAGAAGCGGACGGCCATGACGGAC
GCTTGTTTTCATGATTGAATGTCATTACGAGGCAACGAAGGATGCACTTG
TGAGGCATTTGGCATGACATGCATGTATGTACTTTTACGGAAAGGGACTT
TATTGGAGCTTAAATCAAGGCCTGTAACTTGAGC back to topCoding sequence (CDS) from alignment at ch4:1484525..1487408+ >KJC3_005064-T1 ID=KJC3_005064-T1|Name=KJC3_005064-T1|organism=Aspergillus niger KJC3|type=CDS|length=2754bp|location=Sequence derived from alignment at ch4:1484525..1487408+ (Aspergillus niger KJC3)
ATGGATTTCATTCTTTCTTTGACGCATTTCTGCGAGGTGCATGGTCCTAC
CTCGATCATCTGCTCGCAGGTCCTACCGTTCCCTTGTTCACAATGCTATC
CCGACAAATCTGATTCCTCTCCCGACGAAACCCCTGCCACCTCTCACGAC
ACCGTTTCATCCCACGGCCTGCAGAGCCGCGCGAATACTAAATCTACCCC
AAATAAACTCTCGGAAAAGAACATCGACTCCTCCGACAGGTCTCCCAGGA
TAGAAGACCATCCCTATTTCCTCAAAGGCCAGGCCACGCCGGCTGACACT
CAACAACGACCCAACTTCCTCGGCGGCGCAGACGGCGACACGTGCGCCAG
TTGCAGCTTGACTCTCCCTGAAGATGTGAGCAAGCAGCTGCCCCCAGGTG
CGCCAGGAACGGCCCGAAGTGACGGCAAAGGGAGGAACGGCAGTCCGGTT
TTGCGATCGAGAGAGGTCGTCTACTCTTGTGGGACCAGTCACGCCGACCA
CGATGATACCACACACGACCCGCATGCTCATGCTTCATACCCCGACTCCC
TTCATTCGGCCTCTGTTACATCGGACGCCTCCTGTCATACACACATCCTC
ACCTATCTTTCATTGCGCGGACCTCCCAATCCGGCTGATTACGCGCTTCT
GCGACGTTCCTCCATTCGAACCCTGAGTTGCGAACTTTTGCCACGCGGTC
TTTCCTCGGGCCCTCTATGTTTTGGCGATTCTACCGCTGGCTATACGATA
GCTTACATCTTTCGCCTGCCCGACCCCATGGCTCGCGGGAAACGGCGTAG
CTATGCCCTTGTCGCATTGGCAGGAAAAGATGCCGGACGAGCCTTCCGTG
CCTGTCCTGTGATTTGGCGCGCATTTGGTCGGATTGCCACGGGCATTGTC
AACTCAGCGGAGAAATACCAGGAAGAAGAAAAGCGTCGCGATGAACAAAA
CAACGCATCGAATAGACGCGGGAGCAAGCAGTATACACCTGTTTCCTCTT
TCCTCACAGGGCGCGCCCTTGACCCAGATGGACAGCTTCGCAGACCCGGT
CAAGTGCGAGCGAGAAACCTTTCGGAAATCGTGGGAAACCAATACATCTT
TGCTGAAATACATGCACACTTTGTTGCGCTCCTGCAGCAGCTGGGTACGA
TGTTTGGAGCCTCACCTATTTCAGAAGAACGATTCGTGTGCAGCACAGTG
CGCGAAGAAGACGCCACTGCTTCACGGAAATCATCATTAGTTCCTGGTGG
CAAGGAGAAGCCGCAGGATAAGCTTTCGCGACAATACGAGGACAGCGATC
TGGGAATGTCCACTTTGGACATCTCCTCGGGGCCTAAGCCGATCCCCATC
GCACCTCGCCGACCAGTGATCGCTTAGATGGATTTCATTCTTTCTTTGAC
GCATTTCTGCGAGGTGCATGGTCCTACCTCGATCATCTGCTCGCAGGTCC
TACCGTTCCCTTGTTCACAATGCTATCCCGACAAATCTGATTCCTCTCCC
GACGAAACCCCTGCCACCTCTCACGACACCGTTTCATCCCACGGCCTGCA
GAGCCGCGCGAATACTAAATCTACCCCAAATAAACTCTCGGAAAAGAACA
TCGACTCCTCCGACAGGTCTCCCAGGATAGAAGACCATCCCTATTTCCTC
AAAGGCCAGGCCACGCCGGCTGACACTCAACAACGACCCAACTTCCTCGG
CGGCGCAGACGGCGACACGTGCGCCAGTTGCAGCTTGACTCTCCCTGAAG
ATGTGAGCAAGCAGCTGCCCCCAGGTGCGCCAGGAACGGCCCGAAGTGAC
GGCAAAGGGAGGAACGGCAGTCCGGTTTTGCGATCGAGAGAGGTCGTCTA
CTCTTGTGGGACCAGTCACGCCGACCACGATGATACCACACACGACCCGC
ATGCTCATGCTTCATACCCCGACTCCCTTCATTCGGCCTCTGTTACATCG
GACGCCTCCTGTCATACACACATCCTCACCTATCTTTCATTGCGCGGACC
TCCCAATCCGGCTGATTACGCGCTTCTGCGACGTTCCTCCATTCGAACCC
TGAGTTGCGAACTTTTGCCACGCGGTCTTTCCTCGGGCCCTCTATGTTTT
GGCGATTCTACCGCTGGCTATACGATAGCTTACATCTTTCGCCTGCCCGA
CCCCATGGCTCGCGGGAAACGGCGTAGCTATGCCCTTGTCGCATTGGCAG
GAAAAGATGCCGGACGAGCCTTCCGTGCCTGTCCTGTGATTTGGCGCGCA
TTTGGTCGGATTGCCACGGGCATTGTCAACTCAGCGGAGAAATACCAGGA
AGAAGAAAAGCGTCGCGATGAACAAAACAACGCATCGAATAGACGCGGGA
GCAAGCAGTATACACCTGTTTCCTCTTTCCTCACAGGGCGCGCCCTTGAC
CCAGATGGACAGCTTCGCAGACCCGGTCAAGTGCGAGCGAGAAACCTTTC
GGAAATCGTGGGAAACCAATACATCTTTGCTGAAATACATGCACACTTTG
TTGCGCTCCTGCAGCAGCTGGGTACGATGTTTGGAGCCTCACCTATTTCA
GAAGAACGATTCGTGTGCAGCACAGTGCGCGAAGAAGACGCCACTGCTTC
ACGGAAATCATCATTAGTTCCTGGTGGCAAGGAGAAGCCGCAGGATAAGC
TTTCGCGACAATACGAGGACAGCGATCTGGGAATGTCCACTTTGGACATC
TCCTCGGGGCCTAAGCCGATCCCCATCGCACCTCGCCGACCAGTGATCGC
TTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005064-T1.utr5p1 | KJC3_005064-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005064-T1.utr3p1 | KJC3_005064-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037521 |
| DBxref | InterPro:IPR037520 |
| DBxref | PFAM:PF11704 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1484525..1487408 + |
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