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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1500540..1502739+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005069-T1 ID=KJC3_005069-T1|Name=KJC3_005069-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2200bp|location=Sequence derived from alignment at ch4:1500540..1502739+ (Aspergillus niger KJC3)
CAGCTGCGCGCGCTTCGGTTTCTGATATTACTTAAAAGTCTACTTATTCC
TCACATAATTCTCTAACAATTGATCAAAAATATAGCTCCAATTCGTGGGT
GTCCCACACTCGATTGAGCTCTTATCATCACAGTCAGACGGTCAGCAGGG
GCCTCTCGTACTGTCCGACGCCGCAAAGGCTCAATACGACATGGTTGTCT
GCACGTACTTCCAGCAGGGGCGGTGCAGATTTGGAGGTACGAAGACATAT
TGCTCCCCCAGATTCTAGTTTTATTCTTTCTCTAGTCTGAATAGTGGACT
AACTATCATTCCAGACCGTTGCAAGAATGAGCACCCTAGCCAGCAGACAT
TGAGCTCCGGCAACCGTTTTGGAGCACTTGCTGGGGGAGGTTTCGGAGGT
ACGTTTAGTGCTTGTTGTTGGAGACAACACAACGCAGCATGCTCTCTTTT
TGCATGAGCTATTATGTGTGCCAATGCTCATGATCACTTTGGATCCTATT
GTCATTTTTGTTTGTTTTCTTCATGCCCTGTCACCGCTTATACATGTGTT
GCTTGTTCCACGTTTTGTTGTCTCTACCATAGGCTGCATTGAGATGTTCT
AACTCCAAACATAGGCCGTGGCGCTCAGACTCAGCAATCTGCAGAGTAAG
TTGTTCTTCAGCCATGCTAATTACATGAGACCTTTCTGACACCCCACAGC
TATGGAATAACTACGACGGACATCAAGGCCGATCTTACCGCCGGTAAAGG
CCGGCCAGAATGGATTTTCTCCTGCTACGGTCCTGGAAGAAACGCCCCAA
GGCAACTGTTTGGAGGCACTAGCCGAGAGCGGAGTTTTGAAGAACTGCGA
CTGCGCCATTATGAAGCTGCCGCCGCAGGCAACGCTGACCAGGCAGTCCA
AGAAGCTCAAGCTCTATATGCGGAGGCCTTGAAGCAGATGGATGTCATCC
TGAATGACCTCAATGGCGCTGTAAAGTATGTCGTCGACGGAATCAATGAA
CATCCCAACAGGATTGACATCGTGGAGGGCAAGACCGGCCCAACTTCCAC
CCAAGCGCCTTCTGCTTTCGGTCAGCCCTCGCAACCTAGCCAACCTTCAC
CATTCGGGCAACCCGCTGCTCCCAGCTCAGCACCGGCTTTTGGTCAGCCT
TCAGGGCTAGGTAGTCAACCCTTCGGCAAACCCTCTGCGTTCGGTCAGCC
GTCAGCCTTCGGGCAGCCCTCGGCCTTGGGGCAAACATCTGGTTTGGGGC
AAGCATCTGGCTTTGGACAACCTAGTGCTTTAGGTCAAGGGTCTGCATTT
GGACAGCCGTCAGGCTTAGGAGGGCAGCCGGCATTCGGTAAACCAGCCTT
TGGCCAACCTAGCTTTGGTCAGCCTTCTACCGGCCAGTCTTCATTTGGCC
AACCCTCGTCTCTTGGAACATCAGCATTCGGGACACCTGGTGCGGCCTCC
CCATTTAGTCAGATATCAGCACCTAGCCAGCAACCAAGCGGCTTTGGCCA
GTCCGCTGGACAAGCTTCACCGTTCGCGCAGGTCGGGAGTCAAACCCCCG
CCGCGTCTTCTGGCTTCGGTCAACCCTCGACAACACAGCCGGTTGGTTTC
GGCCAACCATCACAGACAGCTTCCCCTTTTGGTCAACCTCAACAGCAACA
GCAGCAGCAACCGCCTTCAAACCCTTTTGGTCAACCATCCACGGCCCCAG
CCCCGAGTCCCTTTGGAGCTCCAAGCCAACCAGCTGCACCTTCAGGATTT
GGACAGCCAGCTAGCGGGTTCGGACAGTTGGGCCAGTCGGCGCCTGCCCC
TGCTCTTGCATCCACACCAACAGCTACCGCAGGAACCGGCCCTCCTGCCA
TCATTAAGATAGACAACCCCAATGAGCTGCACCCCATCCCACCGCTGACG
GGTCAGACCATCCGCGACCCTATGACCAAGAGGCTTTCAGCTTGGAAGGG
ACAACCGGTCAAGTACATCAACAACGAACCCTGCTATCTACATCCGCAGG
ATCGTCAGACCTACGTCCGCATCTTCTTTCCAGATGGGCCGCCTGACGCA
GCCAGCTTAAGGGATGCGCATGGAAAGGACGAGGAGTATACGGTTGAGGT
CACCGAGCAGTACGAGTTCTTTGTGAAAAACGGATGCTTCAAGGACGGAG
TGATTCCGAGCGTGCCCCCGAAGACAGAATGGGTGAGCTTCGACTTTTAG
back to topCoding sequence (CDS) from alignment at ch4:1500540..1502739+ >KJC3_005069-T1 ID=KJC3_005069-T1|Name=KJC3_005069-T1|organism=Aspergillus niger KJC3|type=CDS|length=6648bp|location=Sequence derived from alignment at ch4:1500540..1502739+ (Aspergillus niger KJC3)
ATGGTTGTCTGCACGTACTTCCAGCAGGGGCGGTGCAGATTTGGAGACCG
TTGCAAGAATGAGCACCCTAGCCAGCAGACATTGAGCTCCGGCAACCGTT
TTGGAGCACTTGCTGGGGGAGGTTTCGGAGGCCGTGGCGCTCAGACTCAG
CAATCTGCAGACTATGGAATAACTACGACGGACATCAAGGCCGATCTTAC
CGCCGGTAAAGGCCGGCCAGAATGGATTTTCTCCTGCTACGGTCCTGGAA
GAAACGCCCCAAGGCAACTGTTTGGAGGCACTAGCCGAGAGCGGAGTTTT
GAAGAACTGCGACTGCGCCATTATGAAGCTGCCGCCGCAGGCAACGCTGA
CCAGGCAGTCCAAGAAGCTCAAGCTCTATATGCGGAGGCCTTGAAGCAGA
TGGATGTCATCCTGAATGACCTCAATGGCGCTGTAAAGTATGTCGTCGAC
GGAATCAATGAACATCCCAACAGGATTGACATCGTGGAGGGCAAGACCGG
CCCAACTTCCACCCAAGCGCCTTCTGCTTTCGGTCAGCCCTCGCAACCTA
GCCAACCTTCACCATTCGGGCAACCCGCTGCTCCCAGCTCAGCACCGGCT
TTTGGTCAGCCTTCAGGGCTAGGTAGTCAACCCTTCGGCAAACCCTCTGC
GTTCGGTCAGCCGTCAGCCTTCGGGCAGCCCTCGGCCTTGGGGCAAACAT
CTGGTTTGGGGCAAGCATCTGGCTTTGGACAACCTAGTGCTTTAGGTCAA
GGGTCTGCATTTGGACAGCCGTCAGGCTTAGGAGGGCAGCCGGCATTCGG
TAAACCAGCCTTTGGCCAACCTAGCTTTGGTCAGCCTTCTACCGGCCAGT
CTTCATTTGGCCAACCCTCGTCTCTTGGAACATCAGCATTCGGGACACCT
GGTGCGGCCTCCCCATTTAGTCAGATATCAGCACCTAGCCAGCAACCAAG
CGGCTTTGGCCAGTCCGCTGGACAAGCTTCACCGTTCGCGCAGGTCGGGA
GTCAAACCCCCGCCGCGTCTTCTGGCTTCGGTCAACCCTCGACAACACAG
CCGGTTGGTTTCGGCCAACCATCACAGACAGCTTCCCCTTTTGGTCAACC
TCAACAGCAACAGCAGCAGCAACCGCCTTCAAACCCTTTTGGTCAACCAT
CCACGGCCCCAGCCCCGAGTCCCTTTGGAGCTCCAAGCCAACCAGCTGCA
CCTTCAGGATTTGGACAGCCAGCTAGCGGGTTCGGACAGTTGGGCCAGTC
GGCGCCTGCCCCTGCTCTTGCATCCACACCAACAGCTACCGCAGGAACCG
GCCCTCCTGCCATCATTAAGATAGACAACCCCAATGAGCTGCACCCCATC
CCACCGCTGACGGGTCAGACCATCCGCGACCCTATGACCAAGAGGCTTTC
AGCTTGGAAGGGACAACCGGTCAAGTACATCAACAACGAACCCTGCTATC
TACATCCGCAGGATCGTCAGACCTACGTCCGCATCTTCTTTCCAGATGGG
CCGCCTGACGCAGCCAGCTTAAGGGATGCGCATGGAAAGGACGAGGAGTA
TACGGTTGAGGTCACCGAGCAGTACGAGTTCTTTGTGAAAAACGGATGCT
TCAAGGACGGAGTGATTCCGAGCGTGCCCCCGAAGACAGAATGGGTGAGC
TTCGACTTTTAGATGGTTGTCTGCACGTACTTCCAGCAGGGGCGGTGCAG
ATTTGGAGACCGTTGCAAGAATGAGCACCCTAGCCAGCAGACATTGAGCT
CCGGCAACCGTTTTGGAGCACTTGCTGGGGGAGGTTTCGGAGGCCGTGGC
GCTCAGACTCAGCAATCTGCAGACTATGGAATAACTACGACGGACATCAA
GGCCGATCTTACCGCCGGTAAAGGCCGGCCAGAATGGATTTTCTCCTGCT
ACGGTCCTGGAAGAAACGCCCCAAGGCAACTGTTTGGAGGCACTAGCCGA
GAGCGGAGTTTTGAAGAACTGCGACTGCGCCATTATGAAGCTGCCGCCGC
AGGCAACGCTGACCAGGCAGTCCAAGAAGCTCAAGCTCTATATGCGGAGG
CCTTGAAGCAGATGGATGTCATCCTGAATGACCTCAATGGCGCTGTAAAG
TATGTCGTCGACGGAATCAATGAACATCCCAACAGGATTGACATCGTGGA
GGGCAAGACCGGCCCAACTTCCACCCAAGCGCCTTCTGCTTTCGGTCAGC
CCTCGCAACCTAGCCAACCTTCACCATTCGGGCAACCCGCTGCTCCCAGC
TCAGCACCGGCTTTTGGTCAGCCTTCAGGGCTAGGTAGTCAACCCTTCGG
CAAACCCTCTGCGTTCGGTCAGCCGTCAGCCTTCGGGCAGCCCTCGGCCT
TGGGGCAAACATCTGGTTTGGGGCAAGCATCTGGCTTTGGACAACCTAGT
GCTTTAGGTCAAGGGTCTGCATTTGGACAGCCGTCAGGCTTAGGAGGGCA
GCCGGCATTCGGTAAACCAGCCTTTGGCCAACCTAGCTTTGGTCAGCCTT
CTACCGGCCAGTCTTCATTTGGCCAACCCTCGTCTCTTGGAACATCAGCA
TTCGGGACACCTGGTGCGGCCTCCCCATTTAGTCAGATATCAGCACCTAG
CCAGCAACCAAGCGGCTTTGGCCAGTCCGCTGGACAAGCTTCACCGTTCG
CGCAGGTCGGGAGTCAAACCCCCGCCGCGTCTTCTGGCTTCGGTCAACCC
TCGACAACACAGCCGGTTGGTTTCGGCCAACCATCACAGACAGCTTCCCC
TTTTGGTCAACCTCAACAGCAACAGCAGCAGCAACCGCCTTCAAACCCTT
TTGGTCAACCATCCACGGCCCCAGCCCCGAGTCCCTTTGGAGCTCCAAGC
CAACCAGCTGCACCTTCAGGATTTGGACAGCCAGCTAGCGGGTTCGGACA
GTTGGGCCAGTCGGCGCCTGCCCCTGCTCTTGCATCCACACCAACAGCTA
CCGCAGGAACCGGCCCTCCTGCCATCATTAAGATAGACAACCCCAATGAG
CTGCACCCCATCCCACCGCTGACGGGTCAGACCATCCGCGACCCTATGAC
CAAGAGGCTTTCAGCTTGGAAGGGACAACCGGTCAAGTACATCAACAACG
AACCCTGCTATCTACATCCGCAGGATCGTCAGACCTACGTCCGCATCTTC
TTTCCAGATGGGCCGCCTGACGCAGCCAGCTTAAGGGATGCGCATGGAAA
GGACGAGGAGTATACGGTTGAGGTCACCGAGCAGTACGAGTTCTTTGTGA
AAAACGGATGCTTCAAGGACGGAGTGATTCCGAGCGTGCCCCCGAAGACA
GAATGGGTGAGCTTCGACTTTTAGATGGTTGTCTGCACGTACTTCCAGCA
GGGGCGGTGCAGATTTGGAGACCGTTGCAAGAATGAGCACCCTAGCCAGC
AGACATTGAGCTCCGGCAACCGTTTTGGAGCACTTGCTGGGGGAGGTTTC
GGAGGCCGTGGCGCTCAGACTCAGCAATCTGCAGACTATGGAATAACTAC
GACGGACATCAAGGCCGATCTTACCGCCGGTAAAGGCCGGCCAGAATGGA
TTTTCTCCTGCTACGGTCCTGGAAGAAACGCCCCAAGGCAACTGTTTGGA
GGCACTAGCCGAGAGCGGAGTTTTGAAGAACTGCGACTGCGCCATTATGA
AGCTGCCGCCGCAGGCAACGCTGACCAGGCAGTCCAAGAAGCTCAAGCTC
TATATGCGGAGGCCTTGAAGCAGATGGATGTCATCCTGAATGACCTCAAT
GGCGCTGTAAAGTATGTCGTCGACGGAATCAATGAACATCCCAACAGGAT
TGACATCGTGGAGGGCAAGACCGGCCCAACTTCCACCCAAGCGCCTTCTG
CTTTCGGTCAGCCCTCGCAACCTAGCCAACCTTCACCATTCGGGCAACCC
GCTGCTCCCAGCTCAGCACCGGCTTTTGGTCAGCCTTCAGGGCTAGGTAG
TCAACCCTTCGGCAAACCCTCTGCGTTCGGTCAGCCGTCAGCCTTCGGGC
AGCCCTCGGCCTTGGGGCAAACATCTGGTTTGGGGCAAGCATCTGGCTTT
GGACAACCTAGTGCTTTAGGTCAAGGGTCTGCATTTGGACAGCCGTCAGG
CTTAGGAGGGCAGCCGGCATTCGGTAAACCAGCCTTTGGCCAACCTAGCT
TTGGTCAGCCTTCTACCGGCCAGTCTTCATTTGGCCAACCCTCGTCTCTT
GGAACATCAGCATTCGGGACACCTGGTGCGGCCTCCCCATTTAGTCAGAT
ATCAGCACCTAGCCAGCAACCAAGCGGCTTTGGCCAGTCCGCTGGACAAG
CTTCACCGTTCGCGCAGGTCGGGAGTCAAACCCCCGCCGCGTCTTCTGGC
TTCGGTCAACCCTCGACAACACAGCCGGTTGGTTTCGGCCAACCATCACA
GACAGCTTCCCCTTTTGGTCAACCTCAACAGCAACAGCAGCAGCAACCGC
CTTCAAACCCTTTTGGTCAACCATCCACGGCCCCAGCCCCGAGTCCCTTT
GGAGCTCCAAGCCAACCAGCTGCACCTTCAGGATTTGGACAGCCAGCTAG
CGGGTTCGGACAGTTGGGCCAGTCGGCGCCTGCCCCTGCTCTTGCATCCA
CACCAACAGCTACCGCAGGAACCGGCCCTCCTGCCATCATTAAGATAGAC
AACCCCAATGAGCTGCACCCCATCCCACCGCTGACGGGTCAGACCATCCG
CGACCCTATGACCAAGAGGCTTTCAGCTTGGAAGGGACAACCGGTCAAGT
ACATCAACAACGAACCCTGCTATCTACATCCGCAGGATCGTCAGACCTAC
GTCCGCATCTTCTTTCCAGATGGGCCGCCTGACGCAGCCAGCTTAAGGGA
TGCGCATGGAAAGGACGAGGAGTATACGGTTGAGGTCACCGAGCAGTACG
AGTTCTTTGTGAAAAACGGATGCTTCAAGGACGGAGTGATTCCGAGCGTG
CCCCCGAAGACAGAATGGGTGAGCTTCGACTTTTAGATGGTTGTCTGCAC
GTACTTCCAGCAGGGGCGGTGCAGATTTGGAGACCGTTGCAAGAATGAGC
ACCCTAGCCAGCAGACATTGAGCTCCGGCAACCGTTTTGGAGCACTTGCT
GGGGGAGGTTTCGGAGGCCGTGGCGCTCAGACTCAGCAATCTGCAGACTA
TGGAATAACTACGACGGACATCAAGGCCGATCTTACCGCCGGTAAAGGCC
GGCCAGAATGGATTTTCTCCTGCTACGGTCCTGGAAGAAACGCCCCAAGG
CAACTGTTTGGAGGCACTAGCCGAGAGCGGAGTTTTGAAGAACTGCGACT
GCGCCATTATGAAGCTGCCGCCGCAGGCAACGCTGACCAGGCAGTCCAAG
AAGCTCAAGCTCTATATGCGGAGGCCTTGAAGCAGATGGATGTCATCCTG
AATGACCTCAATGGCGCTGTAAAGTATGTCGTCGACGGAATCAATGAACA
TCCCAACAGGATTGACATCGTGGAGGGCAAGACCGGCCCAACTTCCACCC
AAGCGCCTTCTGCTTTCGGTCAGCCCTCGCAACCTAGCCAACCTTCACCA
TTCGGGCAACCCGCTGCTCCCAGCTCAGCACCGGCTTTTGGTCAGCCTTC
AGGGCTAGGTAGTCAACCCTTCGGCAAACCCTCTGCGTTCGGTCAGCCGT
CAGCCTTCGGGCAGCCCTCGGCCTTGGGGCAAACATCTGGTTTGGGGCAA
GCATCTGGCTTTGGACAACCTAGTGCTTTAGGTCAAGGGTCTGCATTTGG
ACAGCCGTCAGGCTTAGGAGGGCAGCCGGCATTCGGTAAACCAGCCTTTG
GCCAACCTAGCTTTGGTCAGCCTTCTACCGGCCAGTCTTCATTTGGCCAA
CCCTCGTCTCTTGGAACATCAGCATTCGGGACACCTGGTGCGGCCTCCCC
ATTTAGTCAGATATCAGCACCTAGCCAGCAACCAAGCGGCTTTGGCCAGT
CCGCTGGACAAGCTTCACCGTTCGCGCAGGTCGGGAGTCAAACCCCCGCC
GCGTCTTCTGGCTTCGGTCAACCCTCGACAACACAGCCGGTTGGTTTCGG
CCAACCATCACAGACAGCTTCCCCTTTTGGTCAACCTCAACAGCAACAGC
AGCAGCAACCGCCTTCAAACCCTTTTGGTCAACCATCCACGGCCCCAGCC
CCGAGTCCCTTTGGAGCTCCAAGCCAACCAGCTGCACCTTCAGGATTTGG
ACAGCCAGCTAGCGGGTTCGGACAGTTGGGCCAGTCGGCGCCTGCCCCTG
CTCTTGCATCCACACCAACAGCTACCGCAGGAACCGGCCCTCCTGCCATC
ATTAAGATAGACAACCCCAATGAGCTGCACCCCATCCCACCGCTGACGGG
TCAGACCATCCGCGACCCTATGACCAAGAGGCTTTCAGCTTGGAAGGGAC
AACCGGTCAAGTACATCAACAACGAACCCTGCTATCTACATCCGCAGGAT
CGTCAGACCTACGTCCGCATCTTCTTTCCAGATGGGCCGCCTGACGCAGC
CAGCTTAAGGGATGCGCATGGAAAGGACGAGGAGTATACGGTTGAGGTCA
CCGAGCAGTACGAGTTCTTTGTGAAAAACGGATGCTTCAAGGACGGAGTG
ATTCCGAGCGTGCCCCCGAAGACAGAATGGGTGAGCTTCGACTTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005069-T1.utr5p1 | KJC3_005069-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR031908 |
| DBxref | InterPro:IPR041367 |
| DBxref | InterPro:IPR000571 |
| DBxref | PFAM:PF18044 |
| DBxref | PFAM:PF00642 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1500540..1502739 + |
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