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KJC3_005074-T1, KJC3_005074-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005074-T1
Unique NameKJC3_005074-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1510850..1512458+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005074-T1 ID=KJC3_005074-T1|Name=KJC3_005074-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1609bp|location=Sequence derived from alignment at ch4:1510850..1512458+ (Aspergillus niger KJC3)
CGTTCATTCATGCCGCGTATAAGAATCCTAATCTCCCCCACTCTTCTCAT
TGCTCACCACCACCAACTTATTTCAGTCCTCCCAGCCCTCTACTGTAGTG
GGCTAATCATGGCGTCCCCATCTCCTATGAAAATAATCATTGTAAAAGAG
TTTCCTGCCTCCTGCAACCAATGCCTTTGAGTACGAACACTAACCAATTG
CTTCAGGTCGGCGGCTCCCTTTCAGCTCTAATGCAAGGCATCACTCTCCA
TCAACAGGGCCACTCCATCCACATCCTCGAACAGAGTCCCACACCAACTC
CCGTCTCGCACATGGCCGGCGTTAGCATAGGTCCAGACGTCCAGACGTTC
CTGTCGCGCTTCGACCGCGTCTCCCACATTCCACTGGGCATCCCAGCCAC
GCAGCTTCAATCCGTCGACCACTCGGGCCAACCGAAGCCCTTTTTCCGCC
TTCAGCGCATCATGACCTCCTGGGATGCCTTGTATTTTCGTCTCCGCGCC
AACTATGATGGTCTAGCCAGCGACTACATCCCCAACCCTCCAGATCCCCT
CTCTACCTTACCAGACGAATCCTCATGCGACGCACGAGCCCGCGCACGAT
ACGAGTATGGCCAGCGAGTCGTCGACATATCCGAGATCCCATCGACTGGA
CAGCTAGCTATCGTCACAGAGAGCATCAGCAGTAGCACAAGAGCCACAAC
GACATACACAGCAGATCTAGTCCTCGGCGCCGATGGCCCACGTTCCACCG
TCCGCCAACTTTTCTTGCCCCCCTCCCCTCAAGGTGACAACAAAACCCAC
CGCAAATACGCTGGCTACCTCGCCTGGCGCGCCATTATCCCCGAAAGCCG
CATAACCCCTGCCACCCTCGCTATCTTCCAGTCCAACATCAGTTATCTAA
TTCGCAAACGCCCCACCCACGGCTCCCACATCGTCGTCTACCATATTCCC
GGCCCCAATGGCTCCATCACCCCAGGTACCCGCTATCTCAACTTCTGCTG
GTACGAGAACGTGCCTGCGCATGACCTCCCAACTCTCATGACAGACATCC
ATGGCGTGCGGCATCACACCACCGTAGCGCCGGGCCTGGTACCGCCACGG
ATATGGAACCTACAACGTGCACAGGCAGCCGAGGACATGTTGGATTTCCC
AGCTCCCTTCCGTGAACTTCTCTCGCTGATTGATGCTCCGTTTCTGCATC
TCATCACGGATTATCCGCCGGCGGAGAGGACATGTTTTCTCGGTGGTAAG
GTGAGGTTGGTGGGCGATGCGGTAACACTTATGAGACCGCATGCAGCGTT
TAGTACGAATCAGGCGGCGGCGCATGCAGCGCTGATGGGTAGGTGGTTGG
ATAGGGAGGCAACAGCTGGTATGTCGGAGAAGGAATGGGAGTATCAGGTT
GCTAGGTCGGCGGAGTTGCATTGGGCCAGGAGCATTTGGTATGGCGAGTA
CCTTCAGAATTGGTCGATGGTGAGTGCCGTTTGGCACGGTGCGGTTAGGT
ATTGGCTGCTGGCGGCGGGTTATTGGGTGAGGTATTGGTGTGGGTGGGTG
GATCGGCCTGTTACTTAGTTATTCATAGACTGCGGTCTAGATTGATACAT
ATTAGCAAC
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Coding sequence (CDS) from alignment at ch4:1510850..1512458+

>KJC3_005074-T1 ID=KJC3_005074-T1|Name=KJC3_005074-T1|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at ch4:1510850..1512458+ (Aspergillus niger KJC3)
ATGCCGCGTATAAGAATCCTAATCTCCCCCACTCTTCTCATTGCTCACCA
CCACCAACTTATTTCAGTCCTCCCAGCCCTCTACTGTAGTGGGCTAATCA
TGGCGTCCCCATCTCCTATGAAAATAATCATTGTCGGCGGCTCCCTTTCA
GCTCTAATGCAAGGCATCACTCTCCATCAACAGGGCCACTCCATCCACAT
CCTCGAACAGAGTCCCACACCAACTCCCGTCTCGCACATGGCCGGCGTTA
GCATAGGTCCAGACGTCCAGACGTTCCTGTCGCGCTTCGACCGCGTCTCC
CACATTCCACTGGGCATCCCAGCCACGCAGCTTCAATCCGTCGACCACTC
GGGCCAACCGAAGCCCTTTTTCCGCCTTCAGCGCATCATGACCTCCTGGG
ATGCCTTGTATTTTCGTCTCCGCGCCAACTATGATGGTCTAGCCAGCGAC
TACATCCCCAACCCTCCAGATCCCCTCTCTACCTTACCAGACGAATCCTC
ATGCGACGCACGAGCCCGCGCACGATACGAGTATGGCCAGCGAGTCGTCG
ACATATCCGAGATCCCATCGACTGGACAGCTAGCTATCGTCACAGAGAGC
ATCAGCAGTAGCACAAGAGCCACAACGACATACACAGCAGATCTAGTCCT
CGGCGCCGATGGCCCACGTTCCACCGTCCGCCAACTTTTCTTGCCCCCCT
CCCCTCAAGGTGACAACAAAACCCACCGCAAATACGCTGGCTACCTCGCC
TGGCGCGCCATTATCCCCGAAAGCCGCATAACCCCTGCCACCCTCGCTAT
CTTCCAGTCCAACATCAGTTATCTAATTCGCAAACGCCCCACCCACGGCT
CCCACATCGTCGTCTACCATATTCCCGGCCCCAATGGCTCCATCACCCCA
GGTACCCGCTATCTCAACTTCTGCTGGTACGAGAACGTGCCTGCGCATGA
CCTCCCAACTCTCATGACAGACATCCATGGCGTGCGGCATCACACCACCG
TAGCGCCGGGCCTGGTACCGCCACGGATATGGAACCTACAACGTGCACAG
GCAGCCGAGGACATGTTGGATTTCCCAGCTCCCTTCCGTGAACTTCTCTC
GCTGATTGATGCTCCGTTTCTGCATCTCATCACGGATTATCCGCCGGCGG
AGAGGACATGTTTTCTCGGTGGTAAGGTGAGGTTGGTGGGCGATGCGGTA
ACACTTATGAGACCGCATGCAGCGTTTAGTACGAATCAGGCGGCGGCGCA
TGCAGCGCTGATGGGTAGGTGGTTGGATAGGGAGGCAACAGCTGGTATGT
CGGAGAAGGAATGGGAGTATCAGGTTGCTAGGTCGGCGGAGTTGCATTGG
GCCAGGAGCATTTGGTATGGCGAGTACCTTCAGAATTGGTCGATGGTGAG
TGCCGTTTGGCACGGTGCGGTTAGGTATTGGCTGCTGGCGGCGGGTTATT
GGGTGAGGTATTGGTGTGGGTGGGTGGATCGGCCTGTTACTTAGATGCCG
CGTATAAGAATCCTAATCTCCCCCACTCTTCTCATTGCTCACCACCACCA
ACTTATTTCAGTCCTCCCAGCCCTCTACTGTAGTGGGCTAATCATGGCGT
CCCCATCTCCTATGAAAATAATCATTGTCGGCGGCTCCCTTTCAGCTCTA
ATGCAAGGCATCACTCTCCATCAACAGGGCCACTCCATCCACATCCTCGA
ACAGAGTCCCACACCAACTCCCGTCTCGCACATGGCCGGCGTTAGCATAG
GTCCAGACGTCCAGACGTTCCTGTCGCGCTTCGACCGCGTCTCCCACATT
CCACTGGGCATCCCAGCCACGCAGCTTCAATCCGTCGACCACTCGGGCCA
ACCGAAGCCCTTTTTCCGCCTTCAGCGCATCATGACCTCCTGGGATGCCT
TGTATTTTCGTCTCCGCGCCAACTATGATGGTCTAGCCAGCGACTACATC
CCCAACCCTCCAGATCCCCTCTCTACCTTACCAGACGAATCCTCATGCGA
CGCACGAGCCCGCGCACGATACGAGTATGGCCAGCGAGTCGTCGACATAT
CCGAGATCCCATCGACTGGACAGCTAGCTATCGTCACAGAGAGCATCAGC
AGTAGCACAAGAGCCACAACGACATACACAGCAGATCTAGTCCTCGGCGC
CGATGGCCCACGTTCCACCGTCCGCCAACTTTTCTTGCCCCCCTCCCCTC
AAGGTGACAACAAAACCCACCGCAAATACGCTGGCTACCTCGCCTGGCGC
GCCATTATCCCCGAAAGCCGCATAACCCCTGCCACCCTCGCTATCTTCCA
GTCCAACATCAGTTATCTAATTCGCAAACGCCCCACCCACGGCTCCCACA
TCGTCGTCTACCATATTCCCGGCCCCAATGGCTCCATCACCCCAGGTACC
CGCTATCTCAACTTCTGCTGGTACGAGAACGTGCCTGCGCATGACCTCCC
AACTCTCATGACAGACATCCATGGCGTGCGGCATCACACCACCGTAGCGC
CGGGCCTGGTACCGCCACGGATATGGAACCTACAACGTGCACAGGCAGCC
GAGGACATGTTGGATTTCCCAGCTCCCTTCCGTGAACTTCTCTCGCTGAT
TGATGCTCCGTTTCTGCATCTCATCACGGATTATCCGCCGGCGGAGAGGA
CATGTTTTCTCGGTGGTAAGGTGAGGTTGGTGGGCGATGCGGTAACACTT
ATGAGACCGCATGCAGCGTTTAGTACGAATCAGGCGGCGGCGCATGCAGC
GCTGATGGGTAGGTGGTTGGATAGGGAGGCAACAGCTGGTATGTCGGAGA
AGGAATGGGAGTATCAGGTTGCTAGGTCGGCGGAGTTGCATTGGGCCAGG
AGCATTTGGTATGGCGAGTACCTTCAGAATTGGTCGATGGTGAGTGCCGT
TTGGCACGGTGCGGTTAGGTATTGGCTGCTGGCGGCGGGTTATTGGGTGA
GGTATTGGTGTGGGTGGGTGGATCGGCCTGTTACTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005074KJC3_005074Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005074-T1.utr5p1KJC3_005074-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005074-T1.exon1KJC3_005074-T1.exon1Aspergillus niger KJC3exon
KJC3_005074-T1.exon2KJC3_005074-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005074-T1.cdsKJC3_005074-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005074-T1.utr3p1KJC3_005074-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005074-T1KJC3_005074-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036188
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1510850..1512458 +
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