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KJC3_005076-T1, KJC3_005076-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005076-T1
Unique NameKJC3_005076-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1514171..1515709+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005076-T1 ID=KJC3_005076-T1|Name=KJC3_005076-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1539bp|location=Sequence derived from alignment at ch4:1514171..1515709+ (Aspergillus niger KJC3)
GGTTAACCTACTGTAGTGGCTCGCGACAAGGATACCAGCCTGATCAGAGG
AGATTAACCATGAAAGGTGTGAAACAGCCCATTGACTCTCTGCTGTCCGT
GCGGGGGCTCAGTGGATGTTATCCATGTCCTATCTATAGTCCTTGTCTCT
TGGGTTAAAAGATCACCCCTCCCTATGACTTCCCCTCCTTGGTTTCTCTC
TCTTTCTCGCTCATAAGCGTCTCTTCTGTCTTCATTTCACCTCCCCTCCC
TCTGTCTCTCATTATCTTACCATCTCCTACTTCTTTCTCTATATACACGC
TCACAATGGTCATCAAAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTC
GGCGTAAGAACTACCCCAACCATCATCATCATCACCACAGTATTATCTCC
AAGAAAGATCACCTCCCAGCTAACCTCCAAGAAATCCAGTCCGGCCGTGG
CATTGGCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCA
TCGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAG
AGCAAGCAATACGCCACGAACCCAGAATACCAATCCACTCACTTCACTGT
CAACGTCACCGACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCG
AGAAGTTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGAGTGAGTCCC
ATCCACCTCCACTCATCCACCATCATCCCTAAAGGATATCTACAACAACC
TAGAACATAGTACTCTCCCACCAGACTAACTCAAAAGAACTAGGTCGACA
ACGGCGTCCACACCCCCTTCGCCGATACCGACATCGACAACTTCGACCGC
GTCCAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGC
CGCCGCCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCA
CCCGAGACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCT
TTCGCCGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTG
CATGGCAGTGACGAAGATGGTTGGTAAGTTTCTTCTTTTTCCCCTACCTA
CATACATACATTATGCAAATTCATTTTCTCTCTAATATATGTTTCACTTC
AGGACTGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGTGTGCCCCA
TCTGGGTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGAACCCCCAG
GTGCGCGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCAGCTGAGAG
TGATGAGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTCGGCAAGTT
ATGTTAATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGGCGACCTTG
AGGTTTCATTGATTACTTGCTATATATGCCTGGCAGTTAAGGCGGGAGGC
TGAGGGCTCTATGAACATGATAGTAGATCTAATTATGGGGAGGTAGAAGA
GTATGATCAATAAGAAGGGATTTTCGCTTTGATATTATA
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Coding sequence (CDS) from alignment at ch4:1514171..1515709+

>KJC3_005076-T1 ID=KJC3_005076-T1|Name=KJC3_005076-T1|organism=Aspergillus niger KJC3|type=CDS|length=3360bp|location=Sequence derived from alignment at ch4:1514171..1515709+ (Aspergillus niger KJC3)
ATGGTCATCAAAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTCGGCTC
CGGCCGTGGCATTGGCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCG
CCCGTGTCATCGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCT
GCCGAAGAGAGCAAGCAATACGCCACGAACCCAGAATACCAATCCACTCA
CTTCACTGTCAACGTCACCGACCAAGACGGCGTGCAAGCCATGGTTGACT
TTATAGTCGAGAAGTTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGA
GTCGACAACGGCGTCCACACCCCCTTCGCCGATACCGACATCGACAACTT
CGACCGCGTCCAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCG
CCGAAGCCGCCGCCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGC
ACCGGCACCCGAGACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGC
CAACTCTTTCGCCGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGC
ATGCTTGCATGGCAGTGACGAAGATGGTTGGACTGGATCACTCCGCCGAA
GGCATCCGCTGCAACGCCGTGTGCCCCATCTGGGTCCGCACCCCTCTTCT
GGACGTCGAGTTGGAGCGGAACCCCCAGGTGCGCGCGGAGATCGAGGCCG
TTATACCAATTAAGCGTGCAGCTGAGAGTGATGAGGTTGGCGATACTATT
GTTTATTTGCTTAGTCCGTCGGCAAGTTATGTTAATGCCACGAGTTTGTT
GTTGGATGCGGCGGTGACGGCGACCTTGAGGTTTCATTGAATGGTCATCA
AAGGCACCCAATTGGATGGCGTTGCCCTCGTCGTCGGCTCCGGCCGTGGC
ATTGGCCAACAAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCAT
CGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAGA
GCAAGCAATACGCCACGAACCCAGAATACCAATCCACTCACTTCACTGTC
AACGTCACCGACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCGA
GAAGTTCGGACGGCTGGACTATGCCGTAAACGCTGCAGGAGTCGACAACG
GCGTCCACACCCCCTTCGCCGATACCGACATCGACAACTTCGACCGCGTC
CAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGC
CGCCATGCGCAAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCACCC
GAGACATTGGCCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCTTTC
GCCGGACTGCCTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTGCAT
GGCAGTGACGAAGATGGTTGGACTGGATCACTCCGCCGAAGGCATCCGCT
GCAACGCCGTGTGCCCCATCTGGGTCCGCACCCCTCTTCTGGACGTCGAG
TTGGAGCGGAACCCCCAGGTGCGCGCGGAGATCGAGGCCGTTATACCAAT
TAAGCGTGCAGCTGAGAGTGATGAGGTTGGCGATACTATTGTTTATTTGC
TTAGTCCGTCGGCAAGTTATGTTAATGCCACGAGTTTGTTGTTGGATGCG
GCGGTGACGGCGACCTTGAGGTTTCATTGAATGGTCATCAAAGGCACCCA
ATTGGATGGCGTTGCCCTCGTCGTCGGCTCCGGCCGTGGCATTGGCCAAC
AAGCCGCCTTCTCTTTAGCTGAAGCAGGCGCCCGTGTCATCGTCTTCGCC
GACATGAACACCGAAACAGCCACTGCCTCTGCCGAAGAGAGCAAGCAATA
CGCCACGAACCCAGAATACCAATCCACTCACTTCACTGTCAACGTCACCG
ACCAAGACGGCGTGCAAGCCATGGTTGACTTTATAGTCGAGAAGTTCGGA
CGGCTGGACTATGCCGTAAACGCTGCAGGAGTCGACAACGGCGTCCACAC
CCCCTTCGCCGATACCGACATCGACAACTTCGACCGCGTCCAGACCATCA
ACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGC
AAGCAGGCCTCGCGCACCTTCACCAGCCGCACCGGCACCCGAGACATTGG
CCGCGGCGCCATTGTAAACGTCTGCTCAGCCAACTCTTTCGCCGGACTGC
CTGGGAAGGGATCGTATACCGTCTCCAAGCATGCTTGCATGGCAGTGACG
AAGATGGTTGGACTGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGT
GTGCCCCATCTGGGTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGA
ACCCCCAGGTGCGCGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCA
GCTGAGAGTGATGAGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTC
GGCAAGTTATGTTAATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGG
CGACCTTGAGGTTTCATTGAATGGTCATCAAAGGCACCCAATTGGATGGC
GTTGCCCTCGTCGTCGGCTCCGGCCGTGGCATTGGCCAACAAGCCGCCTT
CTCTTTAGCTGAAGCAGGCGCCCGTGTCATCGTCTTCGCCGACATGAACA
CCGAAACAGCCACTGCCTCTGCCGAAGAGAGCAAGCAATACGCCACGAAC
CCAGAATACCAATCCACTCACTTCACTGTCAACGTCACCGACCAAGACGG
CGTGCAAGCCATGGTTGACTTTATAGTCGAGAAGTTCGGACGGCTGGACT
ATGCCGTAAACGCTGCAGGAGTCGACAACGGCGTCCACACCCCCTTCGCC
GATACCGACATCGACAACTTCGACCGCGTCCAGACCATCAACGCCCGCGG
TATGTTCCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGCAAGCAGGCCT
CGCGCACCTTCACCAGCCGCACCGGCACCCGAGACATTGGCCGCGGCGCC
ATTGTAAACGTCTGCTCAGCCAACTCTTTCGCCGGACTGCCTGGGAAGGG
ATCGTATACCGTCTCCAAGCATGCTTGCATGGCAGTGACGAAGATGGTTG
GACTGGATCACTCCGCCGAAGGCATCCGCTGCAACGCCGTGTGCCCCATC
TGGGTCCGCACCCCTCTTCTGGACGTCGAGTTGGAGCGGAACCCCCAGGT
GCGCGCGGAGATCGAGGCCGTTATACCAATTAAGCGTGCAGCTGAGAGTG
ATGAGGTTGGCGATACTATTGTTTATTTGCTTAGTCCGTCGGCAAGTTAT
GTTAATGCCACGAGTTTGTTGTTGGATGCGGCGGTGACGGCGACCTTGAG
GTTTCATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005076KJC3_005076Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005076-T1KJC3_005076-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005076-T1.utr5p1KJC3_005076-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005076-T1.exon1KJC3_005076-T1.exon1Aspergillus niger KJC3exon
KJC3_005076-T1.exon2KJC3_005076-T1.exon2Aspergillus niger KJC3exon
KJC3_005076-T1.exon3KJC3_005076-T1.exon3Aspergillus niger KJC3exon
KJC3_005076-T1.exon4KJC3_005076-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005076-T1.cdsKJC3_005076-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005076-T1.utr3p1KJC3_005076-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1514171..1515709 +
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