|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1539754..1541446+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005090-T1 ID=KJC3_005090-T1|Name=KJC3_005090-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1693bp|location=Sequence derived from alignment at ch4:1539754..1541446+ (Aspergillus niger KJC3)
TGTCTTGCTTCCACTCACATGCGAGAAGCTTCCCTGTCACCCCAGCAGCA
ACCAGCTAACTAAAAATCCTCCTTCAGTGCATCTGACCAAGATGGCGCTA
CCCCTCCCTGACGTCAAGTCTGTCGTGGACTGTGCCTCCTTCAGCCACAC
TGTCCTACCCTTCTTGTCGCAAATCACGGCGCTTCCCGAGCGACTGCAGC
TGGCAGCCGCAGCCAAGGATGTGAATATCCTCAAGGACATCTACCTCTCC
ACCAATCCCTTCATCTCAGCCCTCTTCTTGAGTCTGGCTCTATCAGTCCT
GTTTGTCATCGCTTCGGAGATCAACAGGAACTACTCCCAGGTTGACCGGT
TCTGGAGTATCCTGCCGTCCATCTACAATGTGCACTTTGCTCTCTGGGCC
CGCTTGTCGGGTCTTCAGACTCAGAGCTTGGATACTATCGCAGCCATCAC
CTTGATTTGGAGCGTAAGTTACCGTGATGGCCTGCGCATTACGTCCACCC
CTGCTAACCTACCTAGGCCCGCTTGACGTTCAACTACTGGCGCCGTGGTG
GCTACTCAATTGGCTCGGAAGACTACCGCTGGCAGATCGTACGCTCCAAG
GTCAACAACCGTTTCGTCTTCTTCATCTTCAACATCCTCTTCATCAGCCT
GACGCAGTCCTTGCTGCTGCTCTTGATTACGGCTCCGACCTACAACTTCC
TCCTTCTCTCGCGCTTGTCGGACCACAAATCCTTCGAGGTTCCGGACCTT
GTCTTCTCCCGGGTGGCCTTCTTCTTCATTATTATCGAGTACTTCGCCGA
TCAGCAGCAATGGAACTTCCAGACTGCCAAGCACAACTACCAGCAGACAG
CCCGCATCCCCGACCAGTACAAGGGCCGGTATGAGCCTGAGGATCTGGAG
CGCGGCTTCGTCGTCAGTGGTCTCTGGTCCCTGTCTCGTCACCCGAACTT
CCTCTGTGAGCAGGCCATCTGGCTCACTCTGTACCTCTGGAACTGCTACC
GCACCGAATCCTACGTCCAGTGGACCGGCATTGGTGTCTTGGGCCTTCTG
CTCATCTTCCAGGGTAGCGTTCGTCTCACCGAATCGATCAGCGCCGGCAA
GTACCCTGAGTACAAGGAGTACCAGGCTCGCGTGGGACGCTTCATTCCCC
GTCTGTCGGTCAAGCCCAAGTACAAGAGCAGCAAGAAGAAGGCTCGCAAG
GCTGTCACTGAGCAGCCCGAGGAGAGCGAGCAGACTACTCACGAGGCGGA
CAAGAAGAGCCAGTGAATTTGGAGGATACTTGATGTGCCGAGTTCACATT
GATCTGCCTCTTATTTCGGTTCTGGGTGTTTATCATTTTCATTGATCCCG
GTTTCATTTGATGATTTCGAGTTGTTTTGGAGTACATATCTTTTGGTGTT
GGATCTTCTGGAAAACATATATCATTCTGCTTTCTGCATATACTTTGTAA
TGTTCAGTCTTTGATATCCTTGTCGAATTTATGAAAAGTTCCACCACTGA
AGAAGCACGCGGCAATTGGGCGGGCCCCTTGTATGCGAAATTGACAACAC
GCCTTCTGGCTTCTAAATGCACAGCGCAAATGATGTGTTGCAGACTCGAA
CCAGTCCTATTTACAAGTATAGTTACCCTACACCGCACAATGGCCTACGA
TGTCACTTGAGTTATACTTAAATATAATTTGAACCTGCCTACC back to topCoding sequence (CDS) from alignment at ch4:1539754..1541446+ >KJC3_005090-T1 ID=KJC3_005090-T1|Name=KJC3_005090-T1|organism=Aspergillus niger KJC3|type=CDS|length=2244bp|location=Sequence derived from alignment at ch4:1539754..1541446+ (Aspergillus niger KJC3)
ATGGCGCTACCCCTCCCTGACGTCAAGTCTGTCGTGGACTGTGCCTCCTT
CAGCCACACTGTCCTACCCTTCTTGTCGCAAATCACGGCGCTTCCCGAGC
GACTGCAGCTGGCAGCCGCAGCCAAGGATGTGAATATCCTCAAGGACATC
TACCTCTCCACCAATCCCTTCATCTCAGCCCTCTTCTTGAGTCTGGCTCT
ATCAGTCCTGTTTGTCATCGCTTCGGAGATCAACAGGAACTACTCCCAGG
TTGACCGGTTCTGGAGTATCCTGCCGTCCATCTACAATGTGCACTTTGCT
CTCTGGGCCCGCTTGTCGGGTCTTCAGACTCAGAGCTTGGATACTATCGC
AGCCATCACCTTGATTTGGAGCGCCCGCTTGACGTTCAACTACTGGCGCC
GTGGTGGCTACTCAATTGGCTCGGAAGACTACCGCTGGCAGATCGTACGC
TCCAAGGTCAACAACCGTTTCGTCTTCTTCATCTTCAACATCCTCTTCAT
CAGCCTGACGCAGTCCTTGCTGCTGCTCTTGATTACGGCTCCGACCTACA
ACTTCCTCCTTCTCTCGCGCTTGTCGGACCACAAATCCTTCGAGGTTCCG
GACCTTGTCTTCTCCCGGGTGGCCTTCTTCTTCATTATTATCGAGTACTT
CGCCGATCAGCAGCAATGGAACTTCCAGACTGCCAAGCACAACTACCAGC
AGACAGCCCGCATCCCCGACCAGTACAAGGGCCGGTATGAGCCTGAGGAT
CTGGAGCGCGGCTTCGTCGTCAGTGGTCTCTGGTCCCTGTCTCGTCACCC
GAACTTCCTCTGTGAGCAGGCCATCTGGCTCACTCTGTACCTCTGGAACT
GCTACCGCACCGAATCCTACGTCCAGTGGACCGGCATTGGTGTCTTGGGC
CTTCTGCTCATCTTCCAGGGTAGCGTTCGTCTCACCGAATCGATCAGCGC
CGGCAAGTACCCTGAGTACAAGGAGTACCAGGCTCGCGTGGGACGCTTCA
TTCCCCGTCTGTCGGTCAAGCCCAAGTACAAGAGCAGCAAGAAGAAGGCT
CGCAAGGCTGTCACTGAGCAGCCCGAGGAGAGCGAGCAGACTACTCACGA
GGCGGACAAGAAGAGCCAGTGAATGGCGCTACCCCTCCCTGACGTCAAGT
CTGTCGTGGACTGTGCCTCCTTCAGCCACACTGTCCTACCCTTCTTGTCG
CAAATCACGGCGCTTCCCGAGCGACTGCAGCTGGCAGCCGCAGCCAAGGA
TGTGAATATCCTCAAGGACATCTACCTCTCCACCAATCCCTTCATCTCAG
CCCTCTTCTTGAGTCTGGCTCTATCAGTCCTGTTTGTCATCGCTTCGGAG
ATCAACAGGAACTACTCCCAGGTTGACCGGTTCTGGAGTATCCTGCCGTC
CATCTACAATGTGCACTTTGCTCTCTGGGCCCGCTTGTCGGGTCTTCAGA
CTCAGAGCTTGGATACTATCGCAGCCATCACCTTGATTTGGAGCGCCCGC
TTGACGTTCAACTACTGGCGCCGTGGTGGCTACTCAATTGGCTCGGAAGA
CTACCGCTGGCAGATCGTACGCTCCAAGGTCAACAACCGTTTCGTCTTCT
TCATCTTCAACATCCTCTTCATCAGCCTGACGCAGTCCTTGCTGCTGCTC
TTGATTACGGCTCCGACCTACAACTTCCTCCTTCTCTCGCGCTTGTCGGA
CCACAAATCCTTCGAGGTTCCGGACCTTGTCTTCTCCCGGGTGGCCTTCT
TCTTCATTATTATCGAGTACTTCGCCGATCAGCAGCAATGGAACTTCCAG
ACTGCCAAGCACAACTACCAGCAGACAGCCCGCATCCCCGACCAGTACAA
GGGCCGGTATGAGCCTGAGGATCTGGAGCGCGGCTTCGTCGTCAGTGGTC
TCTGGTCCCTGTCTCGTCACCCGAACTTCCTCTGTGAGCAGGCCATCTGG
CTCACTCTGTACCTCTGGAACTGCTACCGCACCGAATCCTACGTCCAGTG
GACCGGCATTGGTGTCTTGGGCCTTCTGCTCATCTTCCAGGGTAGCGTTC
GTCTCACCGAATCGATCAGCGCCGGCAAGTACCCTGAGTACAAGGAGTAC
CAGGCTCGCGTGGGACGCTTCATTCCCCGTCTGTCGGTCAAGCCCAAGTA
CAAGAGCAGCAAGAAGAAGGCTCGCAAGGCTGTCACTGAGCAGCCCGAGG
AGAGCGAGCAGACTACTCACGAGGCGGACAAGAAGAGCCAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005090-T1.utr5p1 | KJC3_005090-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005090-T1.utr3p1 | KJC3_005090-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010721 |
| DBxref | PFAM:PF06966 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1539754..1541446 + |
|
